Leuconostoc carnosum: C270_06190
Help
Entry
C270_06190 CDS
T02321
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lcn
Leuconostoc carnosum
Pathway
lcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C270_06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcn03019
]
C270_06190
03009 Ribosome biogenesis [BR:
lcn03009
]
C270_06190
Enzymes [BR:
lcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C270_06190
Messenger RNA biogenesis [BR:
lcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C270_06190
Ribosome biogenesis [BR:
lcn03009
]
Prokaryotic type
rRNA helicases
C270_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
UvrA_inter
Cas3-like_C_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AFT82147
UniProt:
K0DEQ5
LinkDB
All DBs
Position
complement(1305226..1306824)
Genome browser
AA seq
532 aa
AA seq
DB search
MKFSELGLSQDILDAITTHGYVEATPIQEKTIPLTLSGRDVIGQAQTGTGKTAAFGLPIL
EHIDLNNKNIQALIVSPTRELAIQTAEELKKLGRDKRVDVQVVFGGSDIRRQIQNLKSHP
QILVGTPGRLLDHINRKTVKIDNVKTLVLDEADEMLNMGFLEDIESIIKNTPADRQTLLF
SATMPPAIKRIGVKFMTNPEHIQIEAKELTTDLVDQYFVRMRENEKFDTMTRIFDVQAPK
LAIVFGRTKRRVEELARGLEARGYHAAGLHGDLTQQMRSRVLSQFKSHEINILVATDVAA
RGLDVKDVSHVYNFDIPQDPESYVHRIGRTGRAGAKGVSVTFVSPNEMDYLRAVEDLTKK
RMTPLEPASLQEARVGKIKNAAGEVKDIVGSIDVNSIKSEVDKLTAQYSVEQLAAALLSS
VADLEKQNTPVEITRERPLPRRRGNGGGRSSGGDRRGGSGSSRNRSGYRGNRDRRGNGDS
REGGQRRERREGGAANGERRFGDYKRRDGRSTERHSGGAQRQHREFTVREKN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttagtgaattaggtttatcacaagatattttggatgcaattacgacacatggc
tacgtagaagcaacaccaattcaagaaaagacaattccattgacattgtctggtagagat
gttattggtcaagcgcagactggaactggtaaaacagctgccttcggtttgccaatatta
gaacatattgacttgaataacaaaaatattcaagcattgatcgtgtcaccaacacgtgaa
ttagcaattcaaaccgctgaagaattaaagaaattaggacgtgataagcgcgtcgatgta
caagttgtttttggtggttcagatattcgccgtcaaattcagaatttgaaatcacatcca
caaatattagtaggaacaccaggtcgtttacttgaccatattaaccgtaagaccgtaaaa
attgacaacgtaaagacattagttttggatgaagctgatgaaatgttgaacatgggcttc
ttagaagacattgaatcaattatcaaaaatacacctgctgatcgtcagacattgttgttc
tcagctacaatgccaccagcaatcaagcgtattggtgtaaagttcatgaccaatccagag
catattcagattgaagctaaagaattaacaaccgacttggttgaccaatactttgtacgc
atgcgtgagaatgaaaagtttgatacaatgacgcgtatctttgatgttcaggcacctaaa
ttggcgattgtgttcggtcgtacaaagcgtcgtgttgaagaattagctcgtggtttggaa
gctcgcggttatcatgcagctggcttgcatggtgacttgacccaacagatgcgttcacgc
gtattgtcacaattcaagtcacatgaaatcaatattttggttgcgactgatgttgcagct
cgtggtttggacgttaaggatgtttcgcacgtttataacttcgatattccacaagatcct
gaatcttacgtgcaccgtattggccgtacaggccgtgctggagcaaagggtgtttctgtt
acatttgtttcaccaaatgaaatggactatctacgtgctgtcgaagatttgacaaagaag
cgcatgacaccattggaaccagcttcattgcaagaagcacgtgttggtaaaatcaaaaat
gctgctggagaagtaaaagatattgttggatctattgatgttaacagtattaaatctgaa
gttgataagttgactgcacaatactctgtagaacaattagcagctgctctcttatcttca
gttgctgatttggagaaacaaaatacgccagttgaaattacacgcgaacgaccattacca
cgtcgtcgtggtaatggtggtggacgtagtagcggtggcgatcgtcgtggtggatcagga
tcatcacgtaatcgtagtggttaccgtggtaatcgtgatcgtcgcggtaatggtgattct
cgtgaaggtggtcaacgtcgcgaacgccgtgaaggtggcgcagcaaatggcgaacgtcgt
tttggtgattacaaacgccgtgatggacgctcaacagaacgtcacagtggtggcgcacaa
cgccaacaccgtgaatttacagttcgtgaaaaaaactaa
DBGET
integrated database retrieval system
