Larimichthys crocea (large yellow croaker): 104917642
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Entry
104917642 CDS
T04659
Symbol
clec16a
Name
(RefSeq) protein CLEC16A isoform X1
KO
K19513
protein CLEC16A
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104917642 (clec16a)
03029 Mitochondrial biogenesis [BR:
lco03029
]
104917642 (clec16a)
Membrane trafficking [BR:
lco04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
104917642 (clec16a)
Mitochondrial biogenesis [BR:
lco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
104917642 (clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
104917642
NCBI-ProteinID:
XP_027140558
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All DBs
Position
XII:complement(407167..445895)
Genome browser
AA seq
1144 aa
AA seq
DB search
MFGRSRSWVGGQGKTKNIHSLDHLKYMYHVLTKNTTVTDHNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDE
EHKNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLVSPETS
EDRKINPQVSLYLLSQVFLIIHYQPMVNALANVILNGDLSVFSAQTDKHSTHKNTASAGG
VRRFTKPPESLERSLELSRHRGRKRTQKRPNYKNLGEEEDDERAGGGGGGSGVGGGEEGW
DDDGGRGGEREGGREREKGKGTEGLGGGGGGSSKGSRASGETAEEIEMVVMEKCKVSELT
EQNITDEEKTAAATRTHTQRSRPFLDMVYSALDCTIDDYHALFVLCLLYAVSHSKGINRD
LLERLQLPVPDQERSSYSLVLAERLIRVMSQAAQPDGKVRLATLELSCLLLKQSVLSGNS
CIIKDVHLACMEGAREESLHLLRGFYKGEEIFLDMFEDEYRSMTSKPLNVEYLMMDASVL
LPPTGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLQGEPETQLPLTRPEDLIK
TDDVLDLNNSDLIACMVVSKDGGQAQRFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDM
QVSGVEDDSRALNIVIHKPSSNPHAKPLPILQANFIFADHIRCIIAKQRLAKGRIQARRM
KMQRIAALLDLPVQPSATEVLGFGQTANASPSGLPFRFYEQSRRAPNDPTANRSVFTSVD
KVPGFAVAHCVSQHSPSPLSSPSPPSSGSGSTGRCDSVTASTISAQSPTDDGTFLEHTPP
SSSGGEGEGGSGEVNLVSSTLSASVTAPALAPSLTPASQPTISLLTDNNADTLSVESLTL
LPPADSPHLHPCASHVPVTHTLQRPDTSIAEEEEDEEKEGDRKEDEELQDEEGSPTDETE
TDATLKEETTTTELVTPTDEVPEEPEGEDAPLEENRDQELQEEDSTATEYAETRADTPDS
PELD
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccggtcacggagttgggttggaggacaggggaagacgaaaaacatccactcc
ttggaccatttgaagtatatgtaccatgtcctgaccaaaaacaccacagtgacagaccac
aaccgaaatcttctcgtggagactatccgctccatcacagagatcctcatctggggggac
cagaatgacagctctgtgtttgacttcttcctggagaagaacatgtttgccttcttcctg
aacatcctgcgtcagaagtcgggacgctacgtgtgtgtccagctcctccagaccctcaac
atactgtttgagaacatcagccacgagacttccctttattacctgttgtcgaacaaccac
gtgaactccatcatcgtccacaagtttgacttctcggacgaggagatcatggcctactat
atctccttccttaagaccctgtcactcaaactcaacaaccataccgtgcacttcttctac
aatgagcacactaatgactttgccctgtacaccgaggccattaagtttttcaaccaccct
gaaagcatggtccgcatcgcagtccgcaccatcacactcaacgtctacaaagtttcattg
gacaaccaacacatgctgcactacatacgagataagacagcagtcccatatttcagcaac
ttggtctggtttattgggagccatgttatcgaactggacaagtgtgtgcagacagatgaa
gaacataagaacagagggaaattaagtgacctggtagcagagcaccttgaccatctccat
tacctgaacgacatcctcataatcaactgtgaattccttaatgatgttttgactgaccac
ctcctcaaccgtttgttcctgcccctctatgtctactctctggttagccccgagacgtct
gaagaccgaaagatcaaccctcaggtctccctctacctgctgtcgcaagtttttctgatc
atccactatcagccaatggtcaacgccctggccaatgttattctcaacggagacctgtct
gtcttcagcgctcagaccgataaacacagcacacacaagaacacggccagtgcaggaggg
gtgcgtcgcttcactaaaccccctgagtctctggaacgctctctggagctgtcgcgccac
cgtggccgcaagagaactcaaaagaggccaaactacaagaacctgggcgaggaggaggat
gacgaaagggctgggggagggggaggaggcagcggagtaggaggaggagaggagggctgg
gacgacgatggaggcagaggaggcgagagggagggaggccgagagagggagaagggaaaa
ggtacagagggattaggaggaggaggaggtgggagttctaagggaagcagagcgagtggg
gagacggcggaagagatagagatggtggtgatggagaagtgcaaggtgtcagagctgacg
gagcagaacatcactgatgaagagaagactgctgcagccacccgcacacacacacagagg
agcaggccattcttagacatggtgtacagtgcccttgactgcaccatcgatgactaccac
gccttgtttgtcctttgtctgctttacgccgtctcacacagcaaaggtataaaccgagat
cttctggagcgtctgcagttgccagttcctgatcaggagaggagctcctacagcctggtg
ctggctgagagattgatcagagttatgagccaggcagcacagccagatggcaaagtgcgt
ctagcgaccctggagctgagctgccttttgttgaagcagtctgtgctgtctggaaacagc
tgtataatcaaagacgttcatctggcctgcatggagggtgcaagagaagaaagtctccat
ttactgcgggggttctacaagggcgaggagatctttctggacatgtttgaagacgaatac
aggagcatgacgagtaaaccgctgaatgtggagtatctaatgatggatgcctcagtgctg
ctgccacccaccgggacccctctgacaggcatcgacttcgtcaagagactcccctgtgga
gatgtggagaagacacgcagggcaatccgtgtgttcttcatgttgcggtccttatcgctc
cagcttcagggagaacctgagacacagctgcctctgaccagacctgaagaccttatcaag
acagatgatgtcttagacctcaataacagtgacctcatagcctgcatggtggtcagtaaa
gacggcggccaggcccagaggttcctcgctgtagatgtgtaccagatgagtctggtcgaa
ccagaaaccaaacgcctcggatggggtgtagtcaagttcgccggccttctccaagacatg
caggtgtctggcgttgaggacgacagcagagcattgaacatcgtcatccataagcccagc
tcaaacccccacgccaagcccctgcccatcctgcaagccaacttcatctttgctgaccat
atccgctgcatcatcgccaagcagcggctggccaagggtcgcatccaggccagacgcatg
aagatgcagaggattgcagctcttttggacctgcctgtgcagcccagtgcgacagaggtg
ttgggtttcggccagacggccaacgcttcacccagcggcctgcctttcagattctacgag
caatcgagaagggcgcccaatgaccccacagcaaaccgatcggtcttcacctccgttgat
aaagtaccaggtttcgcagtggctcactgtgtgtcacagcacagtccctcgccactttcc
tccccttcacctccctccagtgggagtgggagcacaggaagatgtgactctgttactgcg
agcactatatcagctcagagccccacagatgatggtacatttttggagcacaccccgccc
tcctcctcgggcggagaaggggaaggaggaagtggagaagtaaacctagtctcctctact
ctatcggcctcagtcactgctccagccctggctccaagcctcaccccagcatcccagccc
accatctccctcctcaccgacaacaacgcagataccctgagcgtggagtcgctcacactg
ctgccccccgccgactcgccgcacctgcacccctgcgccagccacgttcccgtgacgcac
acactccagagaccggacacatccattgcagaagaggaggaggatgaagagaaagagggg
gataggaaagaagatgaggagctgcaagatgaagaagggtcgccgacggatgagacggag
acggatgcaacattaaaagaggaaactacgacgacagagttggtcacgcccactgatgag
gtgccagaggagccggaaggtgaagacgcacctttagaggagaatagagaccaagagctg
caagaagaggactcgacggctacagagtatgcagagacacgcgctgatacaccagactca
cctgagttggattaa
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integrated database retrieval system
