Larimichthys crocea (large yellow croaker): 104917658
Help
Entry
104917658 CDS
T04659
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04080
Neuroactive ligand-receptor interaction
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104917658 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104917658 (grin2a)
04082 Neuroactive ligand signaling
104917658 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104917658 (grin2a)
Ion channels [BR:
lco04040
]
Ligand-gated channels
Glutamate (ionotropic)
104917658 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
104917658
NCBI-ProteinID:
XP_010727470
LinkDB
All DBs
Position
XII:complement(672096..801104)
Genome browser
AA seq
1550 aa
AA seq
DB search
MKWFGSMSLSNKRSKRRGRRSSSCSSSTGSNSVLLSLALLVAVTLIADPVAAQKQRTGSA
SEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLMS
GTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASI
QQEALLMLNIMEEYDWHIFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIIILDAVEE
DSRSQIMLKKVQSPVVLLYCSKDEAVYVLEEARSLGLTGFGYIWIVPSLTTGNPEITPDE
FPPGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLDEYGDIPEAKTSCYGQMEKTTKLP
PSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKDREWEKMGKLDNRSLTLKYPVW
PRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGT
YIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVG
SLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTA
MAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFI
VSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGST
ERNIRKNYPAMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTI
GSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSS
QLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCTGKPGLLFSISRGIWSC
IHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIMD
MMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANP
NTVEVAVNADAVQTNAKPPRTLWKKSVDTLRSAPPGPPPMPDMLMPDPRMSMKTQRYLPE
DAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVTSKYPRDCSEVELSYLKTKQVSG
GTNQTGRGGGGGEKIYTIDSDREMSLHSDPIHYRESRGLAADDLDYPEIYSDHSDNYRKC
EQPIIHLNSSPLHHTDSDLLPDPAYSKHYSLKEKNLSLSPHETLDRYKQTHCRSCLSKVT
ASYPPGGPYTPTVAASASATRSPYNRCEACLHTANLYDITEDQLLTDPLVSPTLHHQQQQ
QPDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDLGRPARSVSLKEKDRF
LDSTSDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRSKSLYPAHGSENPFLSHSL
RDDTSSRLVHGRSSSDIYKQLAVASPAAVLGAPPIKTRNDANNLRSSVKSTTSYCSRDGR
IANDMYNKEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtttggcagtatgtccctcagcaacaaaaggagtaagaggaggggtagaagg
agcagcagttgtagcagtagcactggtagtaatagtgtgctgctatccctggctctgctg
gtggcggtgaccctgattgcagaccccgtggcggctcaaaagcagcgaactggcagcgcc
tcggaaaaagtgccggtcctgaacattgcggtgatcctgggacgcacacgctacatctcg
gaccgggacatccgagcgctgtggagcaaggaggaccccatcgacgtcaatgtggtcaca
ctgctggtcaacgagaccgaccccaaaagcatcatcacccacatgtgcgacctgatgtcc
gggactaagatccatggcgtggtgtttggggatggcactgaccaggaggccatcgcccag
attttggattttatttcctcgcagacgctgatacccatcctgggcatccatggagggtca
tccatgatcatggctgataaggatgtgaagtcgacgttcttccagttcggtgcctccatc
cagcaggaggctctgctgatgctaaacatcatggaggagtacgactggcacatcttctcc
atcgtcacctccaagttccctggctaccaggagtttatcaacatcctgaaaactaccgtg
gacaatagttttgtgggctgggacctgcagaatatcatcattctggacgcagtggaggaa
gacagccggtctcagatcatgctcaagaaggtccagtccccagtggtcctgctctactgc
tccaaggatgaggcggtctacgtcctggaggaggctcgctctctgggcctcaccggattt
ggatacatctggattgtgccgtcgctcaccactgggaacccggaaataacacctgacgag
tttccaccgggaatgatttcagtctcgtacgacgattgggactacccgttggaggcgcga
gttcgagatggtctggggatcataacgtcagcagcggcagccatgttggacgagtatggt
gacatccctgaagccaagacttcctgttacggccagatggagaagacaaccaaactacca
cccagtgctctacataagtacatgatgaatgtgacatgggatggcagagacttgtcattc
acagaagacggctatcaggaaaacccaaagctggtggtcattgttctcaacaaggacaga
gagtgggagaagatgggaaaactggacaaccgcagcctgacactgaagtatccagtgtgg
ccgcgcttcaactccttcggtgacgctgagctggacgacaaccacctgtccattgtcact
ttagaggagaaaccttttgtcatcgtggaggacgtggagaggctcaccggtacctgcatg
aggaactctgtgccctgcaggaagcatatcaaagacaacacaacagaggctggtgggaca
tacatcaagaagtgctgcaaaggcttctgcattgatattctgaagaagattgcaaagtat
gtgaagttcacctatgacctgtacctggtaaccaatggcaagcatggcaagaagatcaac
aacgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcgga
tctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaa
accgggatcagcgtcatggtctcccgtagcaacggaaccgtctccccgtcagcctttctc
gagccattcagtgcatcagtgtgggtgatgatgtttgtgatgctcctactggtgactgca
atggctgtcttcatgtttgagtacatcagtcctcttggctttaacagaaacctggcgcag
ggaaaagacccccatggcccttccttcaccatgggcaaggccgtgtggctgctgtggggt
ctggtcttcaacaactccgtgccggtgcaaaacccaaaaggaaccaccagtaagttcata
gtgtctgtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacttggcc
gccttcatgatccaggaggaattcgtcgaccaagtcaccggtctctctgacaacaagttt
cagaacccgtacgcgtactcgcctccattccgcttcgggacggttccaaacggatccacc
gagaggaacatcaggaagaactaccccgccatgcaccagtacatggtgaagtatcatcaa
actggagtccaggacgcacttgtcagccttaaaacgggcaaactggatgccttcatctat
gacgctgcagtgttgaactacatggctggcagggatgagggatgtaagctggtgaccatt
ggcagcgggtacatctttgcgaccaccggttatggcatcgctctacagaaaggctcctac
tggaaacggcaagtggatctggccatcctggccatcatcggagatggtgaaatggaggaa
ctcgaagcccagtggctgacaggaatttgccacaatgagaagaacgaagtgatgtccagt
cagctggatgtggacaacatggccggggtcttctacatgctggccactgctatgggactc
tcccttatcacctttgtgtctgagcatctcttctactggaggcttagatactgcttcacc
ggagtctgcaccggcaaaccgggtcttcttttctccatcagtcggggtatctggagttgc
atccacggagttcatattgacatgaagaaaaagacagatctggactttagcccccaagac
aaaatgcttaagcttattaagtcagccaaacagatgaccaacatgtctaacctgagtggc
tcccgcatgaactcacctaaacgagagttcatgcactcagctgggcccatgatcatggac
atgatggcagagaagggcaacttcatctatgctgacaaccgaagctatgcccccaaagat
atgatctatggggacaccggtgacctgcagtcttatcttgctaaccgccacaaagaccac
cttaacaactacatcttccaaggaggccagcatcccctgaccctgaatgatgctaatccc
aacacagtagaggtggctgtgaatgctgacgccgtccagaccaatgctaagccaccccgt
accctgtggaagaagtctgtggacacacttcgttctgcgccacctgggccccctccaatg
cctgacatgctgatgccagacccacgaatgtcgatgaagacacagcgctacctccctgag
gacgcagcccactctgacatctccgactgttccagcagggcggcctcttacaaggaccca
gaaaacaacaagcacctgaagcccaaggacaacttaaaaaaaagatcggtgacgtcaaaa
taccctagggattgcagtgaggtggagctgtcctacttaaaaactaagcaggtcagcggc
ggaaccaaccaaaccgggagaggaggaggaggaggagagaaaatctacaccatcgactca
gaccgagaaatgagcctacactcagaccccattcactaccgcgaaagtcgtggccttgct
gccgatgatttggattatcccgaaatctattccgaccacagcgacaactataggaagtgt
gagcagcccatcattcatctgaactcctcgcctttgcatcacaccgactcagatcttcta
ccagacccagcttactctaaacactacagtctgaaagagaaaaacctttccctgtcccca
catgaaacccttgatcgctacaaacagacacactgtcgttcctgcttgtccaaagtgacc
gctagctacccaccaggggggccgtacacccctactgtagctgcctcagcttctgcaacg
cgctcaccctataatcggtgtgaagcatgcctccatacagccaacctgtatgacattact
gaggaccagctcctcacagacccgttggtcagtcccaccttgcatcaccaacagcagcag
caaccagacgaaatgtttggtctgtactggccgcagacggatgggccgcatgtccaaaag
agaaaccgcttgaggctgagtcgtcagcactcctttgacaacatcatgctagaaaagccc
aaggatgtagacctgggccgaccggcgcgcagcgtcagcctcaaggagaaggatcgcttc
ctggactccacatctgattcgcactatgcgaacctcttcggcatgcgtccctactccggc
agactgtttggtactggctccaaatcaatgctgtttaaccacaacctggaggagagtaag
aggagcaagtccctgtacccggcccatggctcggaaaaccctttcctcagccactcgctg
agggatgacaccagcagcagactggtccatgggcgtagctcctctgatatttacaaacag
cttgcggtagcctcacctgcggcggtccttggagcgccccccatcaaaacacgtaacgat
gcgaacaatctccgctcatctgttaaatccaccacttcatactgctcacgggacgggcgg
atagcgaatgacatgtacaataaagagcatgtgatgccttactcagccaataagactagt
gcatacccggccccacgtggcgtcctaaactcagcccagttcagcaatagacgggtgtat
aaaaaaatccccagtctggagtcagatgtttag
DBGET
integrated database retrieval system
