Larimichthys crocea (large yellow croaker): 104917897
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Entry
104917897 CDS
T04659
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104917897 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104917897 (usp38)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104917897 (usp38)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104917897 (usp38)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104917897 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104917897
NCBI-ProteinID:
XP_019111617
LinkDB
All DBs
Position
X:complement(5163892..5174810)
Genome browser
AA seq
1038 aa
AA seq
DB search
MDKILEGLVSSDHSVPVKKAIVKMVVEAAEKEVTEEQCQSLFNLTTRLVLLGEDAFQRQI
GLQVLDAYARYHRPEFERFFSKDFVLTLLQQGYGQLDRKDPAIIDYIHCCLRLLISCPSV
LEIFSVIQVEVLRMVCERPEPALCARLNTLLSDFVQCIPRDKSGILFCQQLVRTISYFHC
FASQERELSEYVGQVTKVSTLLQNIWKADPATLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPVHMITVLIKSLTTDHNVKDASMTKALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFSRLWYPIVRQGALTVLSHMLLSFQHSPEAFHLVVPRVVDLVQ
SLRTDGLPSSKAFLPQFTELIHCMMYQYSGFPDLYDHILEAIKDLPKPGEEEIKLILNKS
AWTSQSNSFASGLLRQIGKSETGKTGLVNLGNTCYMNSIIQTLFMATDFRRHVLSLHING
SNMLMKKLQMLFAFLAHTQRAAYAPRNFLEASRPPWFNVGSQQDCSEYLRFLLDRLHEEE
KTLQVLESAKPKVASPVDTSSTDPTGQTSPEEGEESSPAETKPRKDGRTLIETMFGGNLI
TGIRCMQCNCISEKEEPFTDLSLAFCPSATSQDSPKPEGPSEEPKGLCQGSVNGGSEIPD
PGSVKVPASNVIPMPATNEPPLSVPDLVNYFLAPEILDEENAYFCDKCSSLQRAERTMKV
VSAPEYLILTLLRFSYDAKCHVRRKILENVTIPPLMRLPVYTPSTPTHCSSSTSSPLQVD
SPESSENLAKKLKPSQKDEEEEENDRIDGAEQITRGGEMSVQSVPYVLSSLVMHSGISSE
SGHYYSYGRNINGADGTQHPANHFALKEDLGNGQAESSLSTCSGLTITPEQVDRPPNGSQ
EAKDWLLFNDSRVTFSSFQSVQNITNRFPKDTAYVLMYRKQELPGQSINGGLMANGMRLN
AEPPLQKELLDAIIKDNKLYLQEQELNARTQALQAPSSSCSFRPNGSDDNNPPGSCGPSG
GGGGGGGGGFNTISRLVF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggagggccttgtgagctccgatcactccgttccagtgaagaaagcc
attgtgaagatggtcgtggaagcagcagagaaagaagtcactgaggagcagtgtcagtcg
ctgtttaatctcaccacccgcctcgtgttgcttggtgaagatgcctttcagaggcagatc
ggcctccaggtgttggatgcctacgcgcgttaccaccgcccggagtttgagcgtttcttc
agtaaagacttcgtcctcactcttcttcagcagggctatggccagttggaccgcaaagac
ccggccattatagactacattcactgctgcctacggctgctcatcagctgcccatcggtg
ctggagatcttcagcgtgatccaagtggaggttttaaggatggtgtgcgagcgtccggag
cctgcgctctgtgcccgcttgaacactttgctgtcagactttgtgcagtgcatcccgagg
gataagtcaggcattttgttctgccagcagcttgtgagaaccatcagttactttcactgt
tttgccagccaagagcgggagctgagcgagtatgtaggtcaggtgactaaggttagcaca
ctgctgcaaaacatctggaaggctgacccagccacactgcttccctcactgcaggaagtc
tttgctattatctcttccacagacccttcctttgacccatccattgctctggccagcctg
gtccagcacatccccgtccatatgatcacagtgcttatcaagagtctcacgacagaccac
aatgtcaaggacgcaagcatgactaaagcactctgcaggatgattgactggctttcttgg
cctctggctcaacatgttgatacctgggtcattgctctactcaaaggactggctgcagtt
cagaagttcacaatcctcatagatgtcactctgcttaaaattgaactggtattcagtcgt
ctgtggtaccctattgtgcgtcagggggcgctaactgtgctctcccatatgctgctgagt
ttccagcactctcctgaggccttccatttggttgttccacgtgtggtggatctagtccag
tctttgaggacagatggtctacccagcagtaaagctttcttgccacagtttactgagctc
atacactgcatgatgtaccagtactccggcttccctgacctctatgaccacatactagag
gccatcaaggatctcccaaaacccggagaagaggagatcaagttaatattgaataaaagt
gcctggacatcccaatccaactcatttgcctcaggacttttgaggcaaattgggaagtct
gagacgggcaagactggcctggtcaacctgggaaacacctgctacatgaacagcatcatc
cagacactcttcatggccacagatttcaggcggcatgttttatcattacatataaacggt
tccaacatgcttatgaaaaagctccagatgctcttcgctttccttgcacacactcagagg
gcagcatacgctcccagaaacttcttggaagcttctcggcctccctggttcaatgtcggc
tctcagcaagactgttctgagtacctcagatttcttctagacaggttacatgaggaagag
aaaacacttcaggtccttgaatcagcgaagccaaaggttgcctcccctgttgacacaagc
agcacagacccaacaggtcagacctctccagaggagggcgaggagtcatctccagcagaa
accaaacctcggaaggacggaaggactttgatagaaacgatgtttggtgggaatctgatc
acaggtattcgctgtatgcagtgtaactgcatctctgagaaagaggagccttttacagac
ctctctttggccttctgtccttctgccacctctcaggacagccctaaacccgaggggcct
tcagaggagcccaagggtctctgtcagggatctgtcaatggcggcagtgaaattcctgac
ccaggctccgtcaaagtcccagctagcaatgtcattcctatgccagcgacaaatgagcct
cccctttctgtgcctgacctggtgaactatttcctggctccagagatcctggacgaagag
aatgcctatttctgtgacaagtgtagctccctccagcgggccgagaggaccatgaaagtg
gtgtcggcacctgaatacttaatcctcaccctgctgcggttctcgtacgatgccaaatgc
catgtccggagaaagattctggaaaatgtcaccatccctccactcatgagacttcctgta
tatactccttctacacctacacattgttcctcttctacctcctcccctctgcaagtagat
tctcctgagagcagtgagaatctggccaagaagctcaaaccatctcaaaaagatgaggag
gaagaggagaacgaccggatagatggagcggagcagataacaagaggaggagagatgtca
gtccagtctgtgccctatgtcctcagctcactggtgatgcattctggtatatcatccgag
agtggccactactactcttatggtcgtaacattaatggagcagatggaacacagcatcca
gccaatcatttcgccctcaaggaagatttgggaaatggccaggctgagtctagcctctcc
acttgctcaggtcttacaattacacctgaacaagtcgacagaccacctaatggtagccag
gaggcaaaggattggctgctgttcaacgacagcagagtgacattctcatccttccaatca
gtgcaaaacattactaatcgcttccccaaggacacagcgtatgtgctcatgtacaggaaa
caggagctaccagggcaaagcataaatggcggactgatggcaaatggaatgagattgaat
gctgagcctcccctgcagaaagaactgcttgatgctattatcaaggacaacaagctgtat
ttacaggaacaggagctcaatgccaggacccaggctctccaggccccttcatcctcctgc
tcattcaggcccaacggttcagatgacaataacccaccagggagctgcggcccatctggt
ggaggaggtggtggaggagggggaggcttcaataccattagtagactggtcttctga
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