Larimichthys crocea (large yellow croaker): 104917954
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Entry
104917954 CDS
T04659
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104917954
03036 Chromosome and associated proteins [BR:
lco03036
]
104917954
Membrane trafficking [BR:
lco04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104917954
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
104917954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
SOS1_NGEF_PH
Beta-prop_RSE1_2nd
BBS2_Mid
DUF7675
IQ_SEC7_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
104917954
NCBI-ProteinID:
XP_019110485
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Position
VI:complement(6573463..6676626)
Genome browser
AA seq
1286 aa
AA seq
DB search
MSTVMSQQPPKEDGEEEDEEQGEEFTFEDSTDEEKLQEDSKGISSDSQLSKMEVKNTDST
QGLQTSPPAGQEGIPTKDVASVSTADVPVNESPSWGAAAAPAAADPSTSATSGGEELRGR
PVVLSDAETPTYSGDHGKEIVKESSSSGDISEALCVAEAEPQTVEASEVIYDDVPSEDPL
SPDEDMIYEDVQRDSGPPGADNGWSSSEFESYEEQSDNEAKQPTRSKLSPEVRRLRERCA
KTKRELAMRLSGKHNYDIKVQQLMKAARSGTKDGLEKTKIAVMRKVSFLQRKDQLEEEDD
AGYLDVAVSEEKHPPPQLSPMPEGLTSHQVVRRHILGSIIQSERSYLESLRRILQEYHRP
LMEADPRILSPRKIRPIFYRIREITQCHSMFQIALASRVAEWDSSEKIGDLFVASFSKSM
VLDVYSDYVNNFTNAMALIKKACMSKPTFLEFLKKKQASSVDRITLYGLMVKPIQRFPQF
ILLLQDMLKNTPKGHVDRLPLQLALTELEMLAEKLNEQKRVADQIAETQQLARSVSDRLL
SKQLNSEQGSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANINVKGPPDISSLV
PVGPKYTMKWSAPLQQVQVVEVGQEGSQNKDTFFQQSGVKRPSSVCTSGKAILGPPRLYQ
ELQELQHDLSVVEEVTLLVGTLQGMYQNLNTTVAQDWCLALQRLIRIKEEQIQSANKCRL
RLQVPGRPDKSGRPVSFMVVLNTPSPLSKISWVNRLHLAKIALREENSPGWLCGEDEGKT
MAQFWCPLLACHMSVFATKSSERKVEAALHNPVHCALLGFSAASTSLPQGYLWVAGGGES
SQGHIEIFSLNRPMPRAVKSLQVGSGVRCLEYVPEPSPNEEVEAGVHKAPSGIGANICVG
SDDGRILVYGSVDTAAQCLLTLHNPEGCPVLCLKHSSRFLFAGLRNGTVMVYGRTNSDDL
WDPDSCRCVSLGSEPVRTLLVLDDSVWASCGNSVTVIDISSLTTQKFEVHPDPMVNVAHM
ACAGGGVWMAFSEGSSIRLFHTETLELLQEINISTRSTLLNTGQKSMRVTSLLICQGLLW
VGTAQGLIITLPVPKLEGIPKITGKGMISLNAHCGPVDFLVATTSSLSPELLKRDSVGDG
PDSACGGEDRSDTSSQESLQQSSAYQGEARGKGRGVLLQYKLRSTSGLPGRPLTALGDEA
SDSSLESLEHSVEDGSIYELSDDPEMWVRGRPCERDGGRRDRVISAAVISGGKGFRRLKE
GVAVGTRTSGEGLENILMVWQLPLTV
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgtgatgtctcagcagcctccaaaggaggatggagaggaggaagatgaggag
caaggggaggagtttacatttgaggacagtacagatgaggagaaacttcaggaggacagt
aaagggatcagctctgactcacaattgtcaaagatggaggtcaaaaacacagacagcaca
caaggcctccaaacttcgcctcctgctggacaggagggcattcccaccaaggatgtggct
tcagtttccactgcagatgttccagttaatgagtcacctagctggggcgcagcagcagca
ccggcagcagccgatcccagtacctcagctacttctgggggagaggagctccgggggcgt
cctgtggtgctgtcagatgcagagacgccgacttattcaggagaccacggaaaagaaatc
gtcaaggaaagctccagctctggggacatctcagaagctctgtgtgtggctgaagctgag
ccacagacggtggaggcatcagaggtgatctatgatgatgttccaagcgaggaccccctc
tctcctgatgaagatatgatatatgaagacgttcagagagacagcggtcctcctggtgca
gacaacggatggagctccagtgagtttgaaagctatgaggagcagtctgataacgaggcc
aaacaaccaacacggagcaagctctctcctgaagtgcgtcgactgagggaacggtgtgcc
aagaccaaacgtgaactggccatgaggctgtctggcaagcacaactatgacatcaaggtt
cagcagctcatgaaggcggcgagaagcgggacaaaagatgggcttgaaaaaaccaaaata
gccgtgatgcgaaaagtttccttcttgcagagaaaggatcaattggaagaggaggatgat
gcaggatacctggatgtggctgtgtcagaagagaagcatcctcctccacagttgagcccc
atgccagaggggctgaccagccaccaggttgtcagacgccatatcctcggctccatcatt
cagagcgagcggagctacctggagtctctcaggagaatcttgcaggaataccacagacca
ttgatggaagctgatccacgcatcttgagtccaaggaagatccggcctatattttatcga
atcagagagatcacacagtgccactccatgtttcagatagcactggcgtcacgtgtggcc
gaatgggacagcagtgagaaaattggagacttatttgttgcctcgttttccaagtccatg
gtgctggatgtgtacagtgattacgtgaacaacttcaccaacgccatggcgctcattaaa
aaggcatgcatgtccaaaccaactttcctggaattcttaaagaagaagcaggcatccagt
gttgatcggatcactctgtatggcctgatggttaagccaattcaacgatttcctcagttc
atattgctcctgcaggacatgcttaagaatacaccgaagggccatgtggatcgtctgccc
ctgcagctcgctctgacagagctggagatgctggctgagaagctgaatgaacagaaacga
gtagctgaccagattgcagagactcaacaactagcccgcagcgtcagtgatcgcctgctc
agtaagcaactgaactcggagcaggggtcactggtcctttgtgagacgcttattgagacc
gtgtacggtgagcggggacaagtcctgaagtcaaaagagagaaaggtcttcctctttgat
gatgtactcatctgcgccaacataaatgtcaaggggcctccggatatcagcagcctagtc
ccagtcggccccaagtacaccatgaagtggagcgcccccttgcaacaggtgcaagtagtc
gaggtggggcaggagggctctcaaaacaaagacaccttctttcaacagagcggggtcaag
cggccaagcagtgtctgcacatcaggtaaagcgatcctgggccctccacggctttaccag
gagctgcaggaactgcaacatgacctgtctgtagtggaggaggttactctccttgtgggc
acgctgcaggggatgtatcaaaacctgaacaccactgtggcccaggactggtgtctggct
ctgcagcggcttattcgcatcaaagaagaacagatccagagtgctaacaaatgtcgctta
cgcctgcaggtgcctggcaggccagacaagtcagggcgtcctgtaagtttcatggtggtc
ctgaacactcccagccccctgagtaagatctcctgggtcaaccgtctgcacttggccaag
atcgcactacgagaggagaattcacctggctggctatgtggagaggatgaagggaagacg
atggctcagttttggtgtcctctgcttgcctgtcacatgtctgtctttgccacaaagtca
tcggagagaaaggttgaagctgccctccacaatcctgttcactgtgcattgttgggcttc
tctgcagcgagcacctccttaccgcaaggctacctctgggtggctggtggaggagaatct
tcccaggggcatatagagatattttccctcaacaggcccatgccaagggctgtgaagagc
ctgcaggtcggctctggtgtccgatgtttggagtatgtgccagaaccttctccgaatgag
gaggtggaggccggagttcacaaggccccctcagggatcggtgccaacatttgtgttgga
tcagatgatgggcgaatactggtctacggcagtgtggacactgcagcacaatgcctattg
accctccataacccagagggctgccctgtgctgtgcctgaagcactcctctcgcttcctg
tttgcaggcctgcggaacgggacggtgatggtttatggaagaactaacagtgatgacctt
tgggatcctgactcctgcagatgtgtaagcctgggctcagaaccagtgcgaacactgttg
gtgttggatgactctgtgtgggcaagctgcgggaactctgtcacagtcatcgacatctcc
agcctcaccactcagaagtttgaagtccatccagacccaatggtcaacgtcgcacacatg
gcgtgtgccggtggaggagtgtggatggcgttctctgagggttcctccattcgtctcttt
catactgaaacattggagcttctgcaggaaatcaacatctcaacacgatcaacactgctg
aacaccggtcagaagagcatgcgagtcacgagtctccttatttgccaggggctgttatgg
gtgggcactgcccaaggcttaattatcactcttccagttcccaaactggagggcatcccc
aaaataacaggaaagggaatgatctctctaaatgctcattgtggccctgtggacttccta
gtagccaccaccagcagtctgtctcctgagctgttaaagagggattctgttggggatggc
ccagattctgcctgtggcggtgaggatcgcagcgacacctcctctcaggaatccctgcaa
cagtccagcgcctaccagggtgaagcgagaggcaaaggtcgcggcgtcctgctgcaatac
aagctgcgctccacgtcaggactacccggacggccattaacggcgctgggcgatgaggcg
tcagactcctccctggagtctttggagcacagcgtggaagatggatctatctatgagctc
agtgatgacccagaaatgtgggttcggggacgtccttgtgagagggatggcggacgcagg
gacagggtgatctctgcagcggttatctctggaggcaagggcttccgtagactgaaggag
ggagtagcagtaggtactaggacaagtggggagggtttagagaatattcttatggtatgg
cagctcccattgacagtgtga
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