Larimichthys crocea (large yellow croaker): 104917979
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Entry
104917979 CDS
T04659
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104917979 (lrba)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Others
Others
104917979 (lrba)
Endosome - Golgi transport
104917979 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104917979 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
DUF1088
Laminin_G_3
PH_BEACH
DED
Motif
Other DBs
NCBI-GeneID:
104917979
NCBI-ProteinID:
XP_027138938
LinkDB
All DBs
Position
X:complement(5919368..6098462)
Genome browser
AA seq
2957 aa
AA seq
DB search
MASEETAVPGAAQPGDGKDGRSGAMALNPGVPIRGIKMKFAVLAGLVEVGEVSNRDIVET
VFNLLVGGQFDLEMNFIIQEPESIICMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQVC
TDVGLIRQVLEHISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPRHAV
KLLSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVD
KDKPYLYCFRTSKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVY
NRWKNSEISCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQIGAVYLFG
EALSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLASSIAFTYNPRATDA
QLCLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQP
SSHELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIV
LAFSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNTI
RRVGTVLQVMHTLKYYYWVINPQDRSGVVPKGLDGPRPNQKEIFSLRAFLLLFVKQLIMK
DHGVKEDELQSILNYLLTMHEDDNLMDVLQLLVALMSEHPGPMVQAFDQRNGIRVIYKLL
ASKSEAIRVQTLKVMGYFLKHLPPKRKAEVMLSHGLFSLLTERLMLHSNNFSMTTYNVLF
ETLTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNAPPSPESMEVRRVFLSDMIK
LFNNSRENRRSLLQCSVWQEWMLSLCFINPRNNEEQKITEMVYAIFRILLYHAIKYEWGG
WRVWVDTLSITHSKVTFEQHKENLSRMFHQYQRQESGGSLSTIRTISGVSQNSENTENVN
GTPTEETAPSTVIELKVDELSQKSPGSASSSTITSSPMEAADEKRPASITVSNILARAEE
EEQKLVQESSRDESGDRKEAETTMAHENNKEELSEETNNQESVTETSTDKSADNLQTSVS
DQPQTDDSKAMEAVTDSATTSASDDTKTPVTDDEKSESEPSKGESSNFMTEDSLNEVDKE
VQEQEGKTGQTSPESAACLENSALGGASAFNEDLADVSSVSDQIQPSDADDSQEESSYAS
AVAGEEKEEDKHEDDESKKNGQEGHEMKTDEGKDEKEEVRTQENTEESESKEEQVSGVES
QTPPVETPEQSETEASKDKDEQSSSTTDTATADQQPSDTTGPSTAQEVAAASDSTSPSQT
SETTTATTEEETASGSADSSSTASNSGTQKSADSVSKTKEIKIARLDVSNVALDTERFEL
KETSTTETSQGQPVAAAAAAAAGGSDQQREGSTSAPRSTMFRIPEFRWSHMHQRLLTDLL
FSIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQVVDNLIMACGGILPLLSAAT
SSSHELENIEPSQGLTVEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGILRQC
LRLVCAMAVRNCLECQQAQSKHGTEISARSYTTMPSTMLGTSKSASAQSPVDAVTGGMSP
VRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKK
HPQRSQSARSTDSGAISGGLEVENGVSLRRYDSGIGDDHTSTAASEADLSSSGMTHGPDA
ISEALSTLSTEVRPSQPTDSKGKNVKDILRSLVSAPADDIMVDPSLLPPAFLGSVGDMAR
ELHYRSFDRSVIVAPKKAGMTPSPGTSTPVPAATAASVSGGTPIDSVAVVSSGDASQSAS
ADSAAATAGQVPASASLPSVPPLSPVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAP
FLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNE
GRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIR
AAKYRDHVTATQLIQKIVNILTDKHGAWGSSAISRPREFWRLDYWEDDLRRRRRFIRNPS
GSTHSEATLKAAAEHVADISASEEDILKGKQSIRSQALGNQNSESETLLDGDDDTLSSLE
EKDLENVTGPVNLSTSAQLVAPAVVVKGTLSVTASELYFEVDEDEPGFKAIDPKILAYTE
GLHGKWLFTEIRAIFSRRYLLQNTALEIFMANRTAVMFNFPEAAMVKKVVHSLPRVGVGT
NFGLPQTRRISLATPKQLFKAANMTQRWQRREISNFEYLIFLNTISGRTFNDLNQYPVFP
WVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSDRYESWEDDQVPKFHYGTHYST
SSFTMMWLLRMEPFTTFFLNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYL
PEMFVNANSYNLGVMEDGTVVSDVELPPWAKSPEEFVRINRLALESEFVSCQLHQWIDLI
FGYKQQGPEATRALNVFYYLTYEGAVNLSSINDPMLREAVEAQIRSFGQTPCQLLIEPHP
PRSSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVTHVAANTQPGLTSPAIITVTANRLFAV
NKWHGLTGHQSSTVQDQQYQLPVEIDPLIASNVGSHRRQISDLLDQSIQISSQCFVITAD
NRFILLCGFWDKSFRVYSTDSGKLTQIVFGHRDVVTCLARSESYIGGDCYVLSGSRDATL
LLWYWNGKHNSIGESPGTEFTTPRAILTGHDCEVTCASVCAELGLVISGCKEGPCLIHSM
NGDLLRTLEGPEHCLRPRLIQSSTEGNCMIYYDKGQFCLFSVNGKMLRHMEVEDSIKAML
LSRDGQYLLTGGDGGVVSVWQVHNLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIV
LFYNDFNRWHHEYQTRY
NT seq
8874 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacggcggtgcccggcgctgcgcagccaggtgatggaaaggacggg
agatccggcgccatggctctcaaccccggagtgcccatcagggggataaagatgaaattc
gccgttctcgccggtctggtggaagttggggaagtttccaaccgagacattgtggagacg
gtgttcaacctgctggtcggcggccagtttgacctggagatgaacttcatcatccaggaa
cctgagagcatcatatgcatggtggaactgttggacaagtgcgagcccacctgtcaggcc
gaggtctggagcatcttcacagctatcctaaagaagagcgtccgcaacctgcaagtgtgc
accgacgtggggctcatccggcaggttctcgagcatatatccaccacggacagcatgatc
gcagacttactggtggacatgttgggtgtgcttgccagctacagcatcacagtaaaagag
ctgaagcttttcttcagcaagctgcagggggagaaaggccagtggcctcgtcatgcagtg
aagcttttgtcagttctgaagtacatggcccacaggaacggccctgactccttcttcagc
ttcccagggaaaaatgcagctgctatagctctccctcccatagcaaagtggccataccag
aatgggtttacattccacacatggctccgcatggatcctctcaacaacatcaatgtagat
aaagacaagccttacttatactgtttccgcactagtaaaggcttgggttactctgcacac
tttgtgggcggctgtttgatagtgacctcattaaaatccaaggggaaaggattccagcac
tgtgtaaagtacgacttcaaaccacagaagtggtacatggtgactcttgttcacgtctac
aaccgctggaaaaacagtgaaattagctgctatgtgaacggagaactggcttcttttgga
gacatcgcctggttcgtcaacactagtgacacgtttgacaagtgtttcctgggatcatcg
gagacggcggatgcaaaccgtgtgttctgtggacagatcggggcagtttacctgtttgga
gaagctctcagcgctgctcagatcctggctatctatcagctgggtccgggttaccagggc
acattcaagtacaaggctgagagcgacttgctgtttgcagagcatcataagaccttgctg
tacgatggcaagttggcctctagtattgccttcacttataacccccgcgccacagatgcc
cagctctgcctggagtcctcccccaaggacaacgcctccattttcgtccactccccccac
gcactcatgctgcaggacgtgaaggccgtggtgactcactcagtccagagcggcatacac
tctattggaggcgtgcaggtcctcttccctctgtttgcacagctagattattgccagccc
tccagccacgaactggacacctccgtctgttgcactttgctatcgtttgtgatggagctc
ttgaagaactcggtggctatgcaagagcaggtcctggcctgcaaaggctttctcgtcatt
ggctacactttggagaagtcttccaaggtgcacgtgacgcggcccgtcctggacattgtg
ctggccttttccagataccttagcaacctgcagaatggcatcttgctacttaagcagctg
tgtgaccacattctgttcaaccctgccatctggatccacgcccctgctaaggtgcaactg
acactttacacttacctggcaacagagttcatcagcacagtcaccatctacaacaccatt
cgcagggtgggcactgtacttcaggtcatgcatacgctgaaatactactactgggttatc
aacccccaggaccgcagcggagtcgtgcctaaaggcctcgatggtccgaggccaaaccag
aaggaaatcttctccttgcgggcttttctgttgttgtttgtcaagcagctcataatgaag
gatcacggagtgaaggaagacgaactacagagtatcctcaactacctccttaccatgcat
gaggatgacaacctcatggatgttctgcagttgttggtggctctgatgtctgaacatcct
gggcccatggtccaggccttcgatcagcgcaacgggattcgtgtgatttacaagcttttg
gcctcgaaaagtgaagcaataagagtgcagacactcaaagtaatgggctactttctgaaa
catttgccaccaaagaggaaagctgaggtcatgctgagtcatggcctgttttccctgctc
actgaacgcctgatgctccactccaacaacttctccatgacaacctacaacgtgcttttc
gagactcttacagagcagatctgcactcaagtgatccataaacagcatccggaccccgac
tccactgtgaagattctcaacccacaaattctgaaggtaatagctgctctgctgaagaac
gctcccccatcccccgagagcatggaggtacgcagggtcttcctgtcagacatgatcaaa
ctgttcaataacagcagagagaaccgcaggagcctgctgcagtgctcggtgtggcaggag
tggatgctctctctgtgcttcatcaacccgcggaacaacgaggagcagaaaatcacagag
atggtgtacgccatcttccgcatcctgctctatcacgccatcaaatatgagtggggcggc
tggcgcgtctgggtggacaccctgtccatcacccactccaaggtaacctttgagcagcac
aaagagaatctgtcgcgcatgtttcatcagtaccaacgccaggagtctggaggatctctg
agcacaatccgaaccatctctggtgtcagccagaactcggaaaacacggaaaatgtaaat
gggacacccacagaggagacggccccgtccactgtcattgaactcaaagtggacgagctg
tcccagaagtctccaggctcagcgtccagttccaccatcacctccagcccgatggaggct
gctgatgaaaagagacccgcatccatcacggtgtccaacatcctggcgagggccgaagaa
gaagaacagaagttagttcaggagtcttccagggatgaatcaggtgataggaaagaggct
gaaactactatggcacatgaaaacaacaaagaagaactgagcgaagagaccaacaatcag
gagtctgtgactgagacttccactgacaaaagcgctgataatctacaaacatcagttagc
gatcagcctcaaacagatgacagtaaagcgatggaagcagttacagactctgctacaaca
tctgcgagtgatgatacaaaaacacccgtaacagatgatgaaaaatctgagagtgaacct
agcaaaggtgaatcatccaacttcatgacagaagactctttgaatgaagtagataaagaa
gtacaagaacaagaaggtaagactggccaaacgtcccccgagagtgcggcctgtctggag
aacagtgctctgggtggagcctccgccttcaacgaagacctggctgacgtgtcgtctgtt
agtgaccagatccagcctagtgatgctgatgatagccaagaggagtcctcttatgcttct
gctgttgccggagaggaaaaggaggaagataaacatgaagatgatgaaagcaagaaaaat
ggtcaggaaggacatgagatgaagacggatgaaggaaaagatgagaaggaggaggttaga
acacaagaaaacactgaagagagtgaaagtaaagaggaacaggtttctggtgtggagagt
cagactcctccagttgaaacacctgaacaaagtgagacagaagcatccaaagataaagat
gaacagtcttcctccacaactgatacggccactgccgaccagcagccctcagatacgaca
gggccctctacagcccaggaggttgcagcagcttcagactccacctcacctagccagact
tcagagaccaccaccgccaccactgaagaggaaaccgcgtccggttctgcagacagcagc
tccaccgcctccaactctggcacccagaaaagtgcagactctgtcagcaagaccaaagag
atcaaaattgccagactggatgtgtccaatgtggccttagacacagagagatttgaactg
aaggagacctcaacaacagaaacaagccaaggacaaccagtggcggcggcggcagcagca
gcagcaggcgggtcagatcagcagagagagggaagcacttcagcacctcgttccaccatg
tttcgcatcccagagttccgctggtcccacatgcaccaacgcctcctcactgacctgctc
ttctctattgagacagatgtccagatgtggaggagtcactccacaaagaccattttggac
tttgtgaacagcagtgagaacgttgtgtttgtgcacaacagcatacacctcatctcccag
gtggtggacaacctcatcatggcttgcggaggaattttacctctgctctctgctgcaacc
tcttcctctcatgaactggagaacattgaaccctcccaaggcttgacagtagaggcttca
gtcaccttcttacagcgcctcatcaacctcgtggatgttctcatctttgccagctcgctc
aatttcactgagatagaagccgagaaaaacatgtcatcaggaggcatcctccgacagtgc
cttcgcctcgtgtgtgctatggcagtgagaaactgtctggagtgtcagcaagcccaatcc
aagcatggcacagaaatctcagcacgcagctatacaaccatgcccagcactatgcttgga
acatccaagtctgcatctgcacagagtcctgttgatgcagtgacaggtggaatgtctcca
gtcagagacctggaccgacttcttcaggacatggacattaaccgcctcagggctgtcgtc
ttcagagatattgaggacagtaagcaggctcagtttctggcacttgctgttgtctacttc
atctcagtcctcatggtgtcaaagtaccgcgacatcctggagccccacaatgacaagaaa
caccctcaacggtcgcagtctgccagaagcacagatagcggtgccatttctggtggacta
gaagtggagaatggcgtgtctctgcggcggtacgattctggcatcggcgacgaccacacc
tcaaccgcagcgagcgaggcagacctgtcatcctccggcatgactcacggtccagacgcc
atctcagaggccttgtctacgctgtcaactgaggtcagaccttctcagcccactgattca
aagggcaagaatgtgaaggatattctgcgcagccttgtgagcgctccagctgatgatatc
atggtggatccgagtctgctgccaccggcgtttctgggaagtgtgggcgacatggccaga
gaactacactaccgctcatttgatagaagtgtcatcgttgcacccaagaaagcgggcatg
acaccgtctccaggcacctccactcccgtccctgcagccactgctgcctccgtgtccggt
gggacacccatcgacagcgtcgccgttgtatcttctggcgacgcctcccagagcgcctct
gcagactctgcagcagctacagccggccaggttccagccagcgcaagcctgccatctgtc
cccccactctcccctgtgacccagaacacagctcccaatatgagtatctcggagcgtctg
gagcatgccctggagaaggcagctcctctgctcagagagatctttgtggactttgccccc
ttcctctctcggaccctgctgggcagccacggtcaagaactccttattgagggcacgagc
ttggtgtgtatgaagtccagcagctcagtggtggagctcgtcatgcttctctgttcacag
gaatggcagaactccatccagaagaatgccggtctagcctttatcgagttggtcaacgaa
ggccggctgctgagtcacaccatgaaggaccacctggttcgtgtggctaatgaagctgaa
tttattcttagccgacagagggctgaagacatccataaacatgcagagtttgagtctaac
tgcgctcagtacgcagcagagaagcgagatgaggagaaaatgtgcgaccacctgattcga
gcagccaagtaccgcgaccatgtgacggcaacgcagctcatccagaagatagtcaacata
ctgactgacaaacatggagcctggggaagctctgccataagccggccgagggagttctgg
cgcctggactactgggaggacgatttaaggcggcgacgccgcttcatcaggaacccctcc
ggatccactcactcagaggctactctcaaagctgcggccgaacacgtggctgatatcagt
gcgtccgaggaggatattctcaaaggcaagcagtccatcaggagtcaggctctgggaaat
caaaactccgagagtgagacattacttgacggagacgatgacactctgtcatccctagaa
gagaaggacctggagaacgtaacaggcccagtaaacttaagtaccagtgctcagctggtg
gctccggccgtggtggtgaaaggcaccctgtccgtcaccgcctccgagctctacttcgag
gtggatgaagacgagccgggcttcaaggccatcgatccaaagattctcgcctatacagaa
ggtcttcatggaaaatggctgtttacagagatccgtgccatcttttccagacgctaccta
ctccagaatacagctctggaaatcttcatggccaacagaacggcggtcatgttcaatttc
ccagaggcagcgatggtcaagaaggtggtccacagtcttcctcgtgttggggtgggcacg
aattttggtcttccacagaccagacgtatctctctggctacaccaaagcagctgttcaag
gcagccaacatgacccagcgctggcaacgtcgcgagatatccaactttgagtaccttatc
tttctcaacaccatctctggtcggaccttcaatgacttgaaccagtacccggtcttcccc
tgggtcattaccaactacgactcagaggaacttgacctcactctgcccagcaacttcaga
gatctgtccaagcccatcggtgcactgaaccccaagagggcagcgttcttttccgatcga
tacgagtcctgggaggatgatcaggtgcccaagttccactatggcacccactattccacc
tccagcttcaccatgatgtggctactgcgtatggaacccttcaccacattttttctcaac
ttccaaggagggaagtttgaccatgccgaccgcaccttctcctcagtgtcccgggcctgg
aggaactgtcagagagacacatctgatgttaaggagctgattccagagttctattacctc
cccgagatgtttgtcaacgccaatagctacaacctgggagtgatggaggacggcactgta
gtctctgatgtggaactgccaccttgggccaagagcccagaggagtttgtgcgcatcaat
cgcctggctttagagagcgagtttgtgtcctgccagctccaccagtggatcgacctcatc
tttggctacaagcagcagggacctgaagccaccagagccctcaatgtcttctattatctg
acatacgaaggtgcagtcaacctgagctccatcaacgaccccatgctcagagaggctgtg
gaggctcaaattaggagttttggacagaccccctgccagttgctcatcgagccacaccca
ccccgaagctcagccatgcaagtgaccccgctgatgtttacggagcagatgcagcaggat
gttatcatggtactgaagttcccgtccaactctcctgtgacccacgtagcggccaacact
cagccaggtctaacgtcacctgccatcatcaccgtcaccgccaaccgcctctttgccgtc
aacaagtggcacggcttgacaggtcatcagagctcaacggtgcaggaccagcagtaccaa
cttcctgtggaaattgaccctctgatagccagtaacgtgggcagtcatcgtcgtcagatc
tcagacctgctggatcaaagcattcagatcagctcgcagtgtttcgtcatcacagccgac
aaccgcttcatccttctgtgcggcttctgggacaagagcttccgggtttactccaccgac
tcaggcaaactgactcagatagtcttcgggcatcgtgacgtggtgacgtgtctggctcgc
tccgagtcgtacatcggcggagactgctacgtcctgtcaggctccagagatgccaccctc
ctgttgtggtactggaacggaaagcacaacagcattggagagagtccaggcacagagttt
accacgccgcgggccatcttaacaggccatgactgtgaagtgacatgcgcaagtgtgtgt
gccgagttgggtctcgtcatcagcggctgcaaagagggtccttgcctgatccattccatg
aatggggacctgctgcggaccctggagggtccagagcattgcctgcgtcctcgccttatc
caatcctccaccgagggaaactgcatgatctactacgacaagggacagttttgtctcttc
agtgtcaatggcaaaatgctcagacacatggaggtggaggacagcatcaaggccatgctt
ctcagtcgtgacggtcagtatctgctgacaggcggtgatggaggtgtagtttccgtctgg
caggttcacaacctcaaacagctgttcacttacccgggctgtgacgcaggaatccgctct
atggccatgtcccatgaccaaaggtgcatcataaccggcatggcgtctggaagtatcgtg
ctcttctacaacgacttcaacagatggcaccacgagtaccagaccaggtactga
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integrated database retrieval system
