Larimichthys crocea (large yellow croaker): 104918010
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Entry
104918010 CDS
T04659
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104918010 (chd9)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104918010 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
104918010
NCBI-ProteinID:
XP_010727925
LinkDB
All DBs
Position
VIII:22144203..22213479
Genome browser
AA seq
3015 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDDDGFPPAPSLVDELNLSADFEPLQVEPIGPGKHQDMILSVST
QQTMPTYSEQMGHYIGIKAQNPVGQAFSGPGGTGSGSGGMIAEQHGQYHNAALSQVPQSN
GLFCNSSSPMWGNQDQNGSMYHPLTQQQQQLCHQQPQLHNQQLHVRQQQTQQQQHHPCHQ
QQQEQQQHRMRQQLQQQQSHQQQLLNQCQHQQINTQTMSLQQQQHHNFSFHQGGQSQSQQ
QVHHTQQQVQHQLTVGGPRFLSRALPSKSYLDQNASLSGTCLQPQQQQGSYQLTRGGQAF
SGSGPEDPNLSFSIHSSSMVHSLPTCSVNSGTTYQPAQYPAYPGEPEIPSLSQQSLSTVS
VSRPNTTPAPLSSTVPELSGTVCQFPSTAVMNQQHSRAPVSQAEQCAFRTLRCSGETQGN
CKSSEMFGDSMSCYTSMASQLPSEQPQSCGAINTNGYQALGDNLLASEVQDGDLDGLGPP
DLLPDLLPQLEAALSQQDESNRSWTDSNPERGHEQRKQPPVVYKEEKPRKNANGPGSQVR
VLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTPRRTHHQMESIIQDKQEKANRIISEAIAK
ARQRGEKNIPRVMSPESFPSSSSQHKTHRDREHKGNGKARLKDKSCRKACIIPSSKPKQK
SKIGKIVIKIGKKKKRKPESSEEESDDDPPPRHTSKDVDSKRRSNRQVKRKKYAEELEAR
MSDDEVKVIVKAKKANTAASKQPALQLFVENPSEEDAAVVDKIMSSRIVKKEISPGVVIE
VEEFFVKYKNYSYLHCEWAVEQQLEKDKRIQQKIKRFKMKQAQRALFFADMEEEPFNPDY
VEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLRAVKP
DSRRVERPPANLWKKREQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKT
IQSITFLEEIYRVGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYE
MYFRDAQGRVLRGTYKFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEG
FKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDLKTEEQVQKLQG
ILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPN
LVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKLLP
KMKAGGHRVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERF
VFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSY
EREMFDRASLKLGLDKAVLQSMSGRDNSLGGGAGGGAVQQQLSKKEIEDLLRRGAYGAIM
DEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDK
WAKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGESDNDESKPKLRRNH
DRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLSYCLVHYR
GDDKIKSFMWDLIAPTEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRK
HNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQKVLDGVDSSEIKIWVPD
PDHSELPALWWDAISDKCLLLGVFKHGYEKYNTIRADPTLCFIERVGRPDEKAIAAEQRG
NDFMDGDVDDPEYKPAPALIKDDMEDDASSPGDLVVTDNAGDAVAVTEGETIYWPSSSVL
TARLRRLITASQRFTKSRQILQIHQTQSQSQQTMVLSAPLCPLPPTLNDTLNPKMAAKIE
RQQRWTRREEADFYRVVSTFGVVFDPNLSRFDWTKFRAMARLHKKTDESLQKYLCAFTAM
CRRVCRLPPKEGDSAVDPSLNIQPITEERASRTLYRVELLRQVREQVLRHSLLYERLPLC
QMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKTAQQQS
RTSTPLLHTQCQAASSVLTGSPLPTPTQRDSEHYGVVPKVELASEGEEGREKLGESWSPP
RAPATPTGLEEKPVPEIKDSERQMVAARTKPLTPNSSERKPKKASKRGRRETRRGSESDS
DGSSSSSSSRSSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSESEGEE
GKKKVPAATSVKGFDEDSVASLSTTQDETQDTHVAENGITNNSSHPFQGGGYMLAASYWP
KDRVIINRLDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGS
KVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEAPQAQQQYLARLHELQSA
SDTGLADITKPQCSFQTAPAPDLTGQMRLNGVIDGQPVVKKRRGRRKNVEGVDLLFMNKS
RVPAVPDQVPPGWGGIGQVGMAAAPALGYSQSSNQVPADNDSRVPVINLKDGTRLAGDDA
PRRKDLEQWLKEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLT
GEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDR
ILTGPIVPEEVSRRGRRPKNPLAKAAAAAAAAPNPAASTMGLNSLLANGLLSGMDLTSLQ
AFQQNLQSLQSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSLLGKP
AQEGAGGSEEKTKGTASGVAGEPSASKTSPHTSDTKGERTEGSNTTPSSTSSSTSSATAP
QSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQSSNSDTTLPPPTALSQS
STHETEQPAAEKDGEEDDEELEEALDEDEEEEEEDESTEQKENSGPEGSGKVESSSSESG
SSSSSSDDSDSSDED
NT seq
9048 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgttggaggtttggaagggctggatgatgat
ggcttccctccagcaccatcacttgtggatgagctaaacctcagtgctgactttgagccc
cttcaagtggagcctataggcccaggcaagcaccaagacatgatactgtcggtttctacc
caacaaacaatgcctacttacagtgagcagatgggtcactacattggcattaaggcacag
aatcctgtcgggcaggcattttctggtcctgggggcacaggtagtggaagtggtggcatg
attgcagagcaacatggtcagtaccacaacgctgccctgagccaagtacctcaatccaat
gggctgttttgtaacagtagcagtccaatgtggggtaaccaagaccaaaatggtagtatg
taccaccccttaactcaacagcaacaacagctttgtcatcagcagccacaactgcacaac
cagcaacttcatgtcagacaacaacaaacacaacagcaacaacaccacccatgtcatcaa
caacaacaggagcagcagcagcacagaatgcggcagcagctgcaacagcagcaaagtcat
cagcagcagctgttaaaccagtgccagcaccaacaaattaacacacagactatgtccctg
cagcaacagcagcatcacaacttttcctttcaccagggtggtcagtctcagagccagcag
caggttcaccatactcagcagcaggtgcagcaccaactaactgttggagggccaaggttc
ctttcaagggctctgccgagtaagtcttatttggatcaaaatgcctctctgagtgggact
tgcttacaaccgcagcagcagcagggtagctaccagttgaccagaggaggtcaagccttc
tctggatcaggaccagaagaccctaacctgtctttctccatacattcgtcatctatggtt
cactccctgcccacgtgctcagtcaattctggcaccacttaccaaccggctcagtaccct
gcttaccctggagagccagaaatacccagtctcagtcagcagtctttgtccacggtctca
gtgtctaggcccaacaccacccctgcacccctctcttctacagtgcctgagctctcaggg
acagtatgtcagtttccatccacagctgttatgaatcagcagcacagtagggccccggtt
agccaggcagagcaatgtgctttccggactctacgttgttctggagaaacccagggaaac
tgcaagtcatctgagatgtttggcgactcaatgagctgctacaccagcatggccagccaa
ctgccctctgagcagcctcaaagctgcggggctataaacactaatggatatcaagcattg
ggagacaatctcctggcatcagaagttcaggatggagacctggatggcctggggcccccg
gacctccttcctgacctgttgccccagctggaggcggctctcagccaacaggatgaatcc
aaccgttcctggactgattccaacccggagaggggacatgagcaaaggaaacaaccacct
gttgtatacaaggaagagaagcctcgaaagaacgctaatggtcctggaagccaggtacgg
gtcctcagtcccccaatgaagagcagctcatcatcctcctcctcttcctcgtcgtcttca
tcctcatccagctcctcatcagagaagaggacgccgcggagaacgcaccatcagatggag
tcaattatacaggataagcaggagaaggccaataggataatatcagaggctattgctaag
gcccggcagcgcggagagaagaatatccccagagttatgagccctgagagcttccccagc
tcctcttcgcagcacaagacccaccgtgaccgcgagcacaaaggaaacggcaaggcccgg
ctcaaagacaagagctgtaggaaggcctgtatcataccctcctccaagcccaagcagaag
tccaaaatcgggaaaattgtaatcaagatcgggaagaagaaaaaacgaaagccggagtct
tcagaggaggagtcggatgacgaccctccccctcgacacacttctaaagatgtggactct
aagaggcgatctaatcgccaggtgaagaggaagaaatacgccgaagagctggaggccagg
atgtcagatgatgaagtcaaggttattgtcaaagccaagaaagccaacactgcagcatcc
aagcagcctgccctacaactctttgtagagaatcccagtgaagaggacgctgctgttgtt
gacaaaatcatgtcctctcgtatcgtcaaaaaggagatctctcctggagtggtgatcgaa
gtggaggagttttttgtaaaatacaaaaactactcctacctacactgtgagtgggccgta
gagcagcagctggagaaggacaagaggattcagcagaagatcaaacgtttcaagatgaaa
caagcacagagggcgctcttctttgcagatatggaagaggagccctttaaccctgactat
gtagaggtagacagagtgctggaggtgtcatattgtgaggacaaagatacaggagaggag
gtggtgtactacctggtgaagtggtgctctctgccttatgaggacagcacctgggaacta
aaggacgacgtagatcagagcaagattgaagagtttgagcagctgcgggcagtcaagcca
gactcacgcagggtggagcgtcccccggccaatctgtggaagaagagggagcagtcgagg
gagtacaggaatggcaacagcctcagggactaccagctagagggggttaactggctcctc
ttcaactggtataacagacgaaactgcatcctggcagacgagatgggcctgggaaagacc
atccagtccatcacatttctagaagagatctatcgtgtgggcattaaagggccattcctc
atcattgccccgctctccaccattgccaactgggagcgcgaattccgtacttggacccat
ctcaatgtcatcgtctaccatggcagcatggtcagcaggcagatgctccaacagtatgag
atgtatttcagggatgcacagggtcgtgtgttgcgaggtacctacaagttccaggcagtt
atcaccacatttgagatgatcctgggaggttgtcccgaactcaacgccatagagtggcgc
tgcgttatcatcgatgaggcccatcgcctcaagaacaagaactgcaagctgctagaaggc
ttcaagctcatgaacctggagcacaaggtcctgctgacaggtactcctctgcagaacaca
gtggaggagctcttcagcctgctccacttcctggaaccggcacgcttcccctcagaaaac
accttcatgcaggagtttggagacctcaagactgaagagcaggtacagaagcttcaaggt
atcctgaagcccatgatgctgcgtcggctaaaggaggacgtggagaaaaagctggctcct
aaagaggaaaccatcattgaggttgagcttaccaacattcaaaagaaatactaccgtgcc
atcctagagaagaacttctctttcctggctaaaggagctggacaggcaaatatgcccaac
ctcgtcaacaccatgatggagctgagaaagtgctgcaaccacccctatctcatcaaagga
gcggaagagaagatcctagaggacttcagggaggtgtatagccccactgccatagacttt
cacctgcaggccatggtacagtctgccggaaagttggtccttattgacaagctgctgccc
aagatgaaggccggggggcacagggtgctcatcttctcccaaatggtgcgctgtttggac
atcttggaagactacctcattcagagaaggtacttgtacgagcggatagatggacgtgtt
cgtgggaacctccggcaggcagctatcgaccgcttcagtaagcccgactcggaacgcttt
gttttccttctgtgtacgagagctggtggcctggggatcaacctcacagcagcagacacc
tgcatcatctttgactctgactggaacccacaaaacgacctgcaggcccaggctcgctgc
catcggatcggtcagaacaaggcagtgaaggtgtaccgtctgatcaccaggaactcgtac
gagcgagaaatgtttgatcgtgccagcctcaagctgggcctggacaaagcagtgttgcag
agcatgagtggccgagataacagccttggaggaggcgccgggggaggggcagtgcagcag
cagctgtctaagaaggagattgaagatctgttgcgacgtggtgcttatggggctatcatg
gacgaggaggatgaaggggccaaattctgtgaggaggacattgaccagatcctccagcgc
aggacgaagaccattaccattgagtctgagggacgaggatccacctttgctaaggctagt
tttgtggcgtccggaaaccgcacagatatctctctggatgaccccaacttctgggacaaa
tgggccaaaaaggctgacatcgatatggaaatggtcaacggcagaaacagcttggtgatc
gacactcctcgtgtcagaaagcagacaaggccgttcagtgccaccaaggatgagttggcg
gagctttcagagggcgaaagcgacaacgatgagtccaaacctaagctcagacgcaaccac
gaccgcctcaacagctatggacgcacagagtgtttcagagtagagaagaacctgcttgtt
tatggatggggtcgctggaaggatattctcaaccatgggcgttttaagaagcagctaaca
gagtgggatgtggagtccatctgcagggctctgctgtcttattgccttgttcattaccgt
ggagatgacaaaatcaaaagcttcatgtgggacctgatcgcaccgactgaggacggacgc
accaaggagctccagaatcacctgggtctgtctgcaccagtcccacgaggacgaaagggt
aagaagatgaagacccagtccagctcttttgatatccacaaagctgagtggcttaggaag
cacaacccagagcacatgcttcaggacgacggctacaagaaacacctcaaacaccactgc
aacaaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgataggaagc
caggcccagaaagtgctggacggcgtggactcaagtgagataaagatctgggtgccagat
cctgaccactctgagctgccagctttgtggtgggatgccatctctgacaagtgtctgctg
ctcggtgtatttaagcatggttatgagaagtacaacactatccgtgcagaccctaccctg
tgcttcatagagcgtgtgggacgaccagatgagaaggccatcgctgccgaacagagaggc
aatgatttcatggatggtgatgtagatgatcccgagtacaagccggctccagccctgatt
aaggacgatatggaggatgacgcctcttcccctggagacttggttgtcactgacaacgcc
ggagatgcagtcgctgtgacagaaggtgaaactatctactggccctcgtcctctgtgctg
acagccagactgagacgtctgatcacagcctctcagcgcttcaccaagagccggcagatc
ctccaaatccaccagactcagtctcagtcccagcagaccatggtactgtctgctccactc
tgcccgctaccccccacactcaacgacactctcaaccccaagatggctgctaagattgaa
cggcaacaaagatggacgaggcgagaagaggctgacttctaccgcgtggtctccaccttt
ggtgttgtttttgacccaaacctcagccggttcgactggaccaagttcagggctatggct
cggttgcacaaaaagacagacgagagtctgcagaaatacctgtgtgcttttaccgccatg
tgccgaagggtgtgtcgtctaccacccaaagagggagactctgcggtggacccgtctctg
aacatccagcccatcacagaggagcgagcgtctcgcaccctgtacagagtagagttgctt
cgccaggtgagagaacaagtccttcgccattcgttactctacgagcgcctgccgctgtgc
cagatgagctctgacttacccgtctggtgggaagctggcacccatgaccgtgaccttcta
attggcgctgccaagcacggtgtgagccgtacagattaccacattctgagagaccctgag
ctcagcttcatggctgcccaacgcaactacagccaaacaaaaaccgcacagcagcagtcg
cgtacctccaccccgcttcttcacactcagtgccaggccgctagctcagtgctgacgggt
tctccgctacctacacccacccagagagactcggagcactatggggttgtacccaaagtg
gaactggcctcggagggggaggaaggcagggagaagctcggggagagttggagtcctccc
cgagcaccagccactcccacaggtctcgaggagaagcccgtccctgagataaaagacagt
gagaggcagatggtggcagcacgaaccaaacctctcacgcccaactcctctgagaggaaa
cccaagaaggccagtaagaggggccgcagggagactaggcgtggctcagagtctgattct
gacggctcctcatcaagctcttcgtctcgctcctcttcctcttcttcgtcatcctcttct
tcatcgtcacattccgggtccagctcctcctcctcttcgtcgtcttgttcttcaggctct
tcgtcgtcatcgtcctcctcctcatcttcttccgatgacagtgaaagtgaaggagaggaa
gggaagaagaaagtgcctgcggcaacaagtgtaaagggctttgatgaggacagcgtggca
tctctgagcactacacaggatgaaacacaagacacgcatgtggccgagaacggcatcacc
aacaactcctcacatccttttcagggaggagggtacatgctcgctgcatcctactggcca
aaggatcgtgtgatcatcaaccgcctggacagcatctgccaggcagtgctaaagggcaaa
tggcccgggacacgtcgggtctacgagcctggaggcgcggtggcctccttctacaccacc
aagctactggacaacgctaacagcctgtgcgaggacccctctgcctcgccacaggggtca
aaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactcaacgatcaggag
ggaggtctgaagttgaccttccaaaaacaaggtctacctctgaagaggcccctggagtca
gaggaagccccccaggctcagcaacagtacctggctcggcttcacgagctgcagagcgcc
tcggacacaggcctggctgacatcactaaacctcagtgcagcttccaaactgcaccagct
ccagatcttactggtcagatgagactgaacggagtaatagatggccagccagtggttaag
aagcgaagaggcaggaggaagaatgttgagggggttgacctgctcttcatgaacaagagt
agagtccctgctgttcctgatcaggtgcctccagggtggggtggtattggccaggtgggc
atggctgcggctcctgcactgggctacagccaaagctccaatcaggtccccgcagacaac
gatagcagggtccctgtcatcaacctcaaagatggcactcggcttgctggggatgacgcc
cccaggaggaaagatctagaacagtggctaaaagagcaccctggctttgtggcagacaca
ggagcctttatccctggggtaaataagatgcaaatgcagttccacttccaggacggtcgg
ccaaagcagaagagacatcgctgtaggaaccccaacaagattgatgtgaacagcttgaca
ggagaggaaagggtccagatcatcaacaggagaaatgcgcgcaaggttggtggagccttt
gcacctcctctgaaggacctgtgccggttccttcaggagaacccggagtatggagtcccg
cctgaatgggctgatgttgtcaaacagtcgggttacctcccagagagcatgtttgacagg
atcctgacgggacctatcgttcctgaggaggtgagccggcgtggacgtcgacctaagaat
cccctggccaaggcagcggcagcagcggcagcagcacccaaccctgcggcctccacaatg
ggtctgaactctctgctggccaatggcctcctctctggaatggacctgaccagcctgcag
gccttccagcaaaacctccagagcttacagtccctgcagctcaccgcaggcctgatgggg
ctgccgtctgacgccagcaacctggctgcaagtaacttggctgccatgtttcccatgatg
ctgtctggtatggctggattgcccaaccttcttggcatgagcagcttgctcgggaagcct
gctcaggagggcgcaggaggctccgaggagaagacaaagggaaccgccagcggtgtagca
ggagagccgtctgcctctaaaacctccccccacacatcagacaccaaaggagaaaggaca
gagggctcgaacacgactccttcctccacttccagctctacttcttctgccaccgcccca
caaagtgcttcagctgcgtctgcagcctccagtcacccactgtctcttaaccccttgtta
ctctccagtatgctttacccagggatgcttctcactccaggccttaaccttcctgtgtct
gccacacagagctcaaacagtgacaccacccttcctcctccgactgccctctctcagtca
tcgacacacgagacagagcagccagcggcagaaaaggacggagaggaggatgatgaggag
ttagaagaggctttggatgaagacgaggaggaagaggaagaagatgagtcaacagaacaa
aaagaaaacagtggtcctgaaggttcggggaaagttgagtcatcttcatcagagtctggg
agctcttcttcctcatcagatgattcagactccagtgatgaggactga
DBGET
integrated database retrieval system
