Larimichthys crocea (large yellow croaker): 104918012
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Entry
104918012 CDS
T04659
Symbol
shox2
Name
(RefSeq) short stature homeobox protein 2 isoform X2
KO
K09331
short stature homeobox protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918012 (shox2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
104918012 (shox2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
KBP3
AcrF31
Motif
Other DBs
NCBI-GeneID:
104918012
NCBI-ProteinID:
XP_010727923
UniProt:
A0ACD3QKK8
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Position
VII:16353321..16360087
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AA seq
289 aa
AA seq
DB search
MEELTAFVSKSFDQKVKEKKEVITYREVLETGSTRAGSRESLTAEPGSREEAGAVTRNVA
LSPGRETDMLGPERIRDAGSPKLIDGNTDVKERKEDSKPLEDEAQTKIKQRRSRTNFTLE
QLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGA
ANQFEACRVAPYVNVGALRMPFQQVQAQLQLDSAVAHAQHHLHSHLAAHAPYMMFPAPPF
GLPLATLAAESASAASVVAAAAAAKNTSKNSSIADLRLKAKKHAAALGL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcaccgcgttcgtgtctaagtctttcgatcagaaagtgaaggagaagaag
gaagtgataacctacagggaggtgttggagaccgggtcgacgcgagcaggaagcagggag
tctttaaccgcggagccgggaagccgagaggaagcgggagccgtcacccggaacgttgcg
ctctcgccgggcagggaaacggacatgctcgggccggaaagaatcagggacgccgggagc
cccaaactcattgacggcaacacggacgtcaaggaaaggaaagaggactcgaagccttta
gaggacgaggcacagactaaaatcaaacagaggagaagtcggactaacttcacattagag
cagctcaacgagctggagaggctcttcgacgagacccactacccggacgccttcatgcgg
gaggagcttagccagcgactgggactgtcggaggcccgagtgcaggtttggttccagaat
agaagagccaaatgcagaaaacaggagaaccagttacataaaggagtcctgattggagca
gcgaatcagtttgaagcatgtcgtgtagcgccatatgtcaacgtgggggctttacggatg
ccattccaacaggtgcaggcgcaactgcagctggacagcgccgtggcccacgcgcaacac
cacctgcactctcacctggcggcgcacgcgccctacatgatgttccccgcgccgccgttc
ggtctgcctctggcgactctcgcggccgagtccgcctccgccgcatcggtcgtggcagcc
gccgccgccgccaagaacaccagcaagaactccagcatcgccgacctgagactgaaggcc
aaaaagcacgcggccgcgctgggactgtga
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