Larimichthys crocea (large yellow croaker): 104918039
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Entry
104918039 CDS
T04659
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104918039
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
DSCAM family
104918039
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Interfer-bind
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
104918039
NCBI-ProteinID:
XP_019129946
LinkDB
All DBs
Position
VII:16591974..16684714
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AA seq
2096 aa
AA seq
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MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSVLDSFQSGEVQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFIVSWYRNTEPVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRASQYTLSDGSTVSHVNVSSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKGTLAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELRGLEKFTNYSIQVLAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVTLEFRPKGTWAWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHVTMDSAKQQALSMGHSGLSNLTSSGASSG
GAGGGGGSGSGGVSASSSSSTLPQRTLTMPGSSASVAQSAAAAAAATAAAAGVSSSSSGG
GVAGATGGTPGGASSSSSKMGGSRDSLLDSSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctctacgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatccgccacgttcatgccaacggc
accctccagctctaccccttctccccctccgcctataacagcattatccacgacaacgag
tacttctgcactgctgagaaccaagcgggcaagattcgtagcccaagcatccacatcaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggtaat
gtcgctgtgttcaagtgcctcatcccctcagctgtccaggaatacgtcagcgtggtgtcc
tgggagaaagacaccgtctccatcgtcccaggtaaccgtttcttcctgacctcatttggc
gctttgtatatctcagaagtgcagaaggaagatgctctgtccacctaccgctgcatcaca
aagcacaagtacagtggagagactcgccagagcaatggagccaggctctctgttatggac
cctacggagtccaccccgtcagtgctggacagtttccagtccggtgaggtgcaggtgggg
cacagtgtggagttgccctgcatcgcatctggatacccaaaccccaccatccgatggcta
aaggatggtcggcccttacctgcagactcacgctggacccggcggatcaccggcctcacc
atttccgacttgaggctcgaagacagtggaaactacatctgtgaggtcaccaacagcttt
ggctccaaagaggtgacgggtcacctcaacgtcatagagccactgcgggtcaccttgtct
cccaagaacctgaagacggggatcagcagtacagtcatcctctcctgtgccgtccagggt
tccccccactttatcgtgtcctggtaccgtaacacagaacctgtcctacccgatcagcac
ttttccatccagggggctcacaatgagacattgttcatttccgctgcacagaagagacat
tcaggagcttaccaatgctttgctacgcgcaagggccagactgcccaggacttctccatc
atactgctggaagatggcacaccccgtattgttgcctccttcagtgagagggtggtggtc
ccgggtgaaccgttttccctgatgtgcgcagccaaaggagcccctcctcccaccatcacc
tggacgctggacgacgaacctgtggcccgtgacctgtcacgcgtcagagccagccagtac
acgctctccgacggcagcactgtgagccacgtcaacgtcagcagcccgcagattcgcgac
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagcgccgagtaccaagcgcgc
ataaacgtaagaggtcccccgaggattcggcctatgaagaacattactgcagtggcagga
agaaacacgttcataaactgccgcgtgattgggtatccttattactcaatcaattggtac
aaggaggggcttctgctgcctgacaaccatcgccaggtggtgtatgagaacgggactctg
aagctcagcgatgttcagaaggggatggacgagggggcctatgtctgcagcgtgctcatc
caaccacaactgttcatcacgcagactgtctatgtcacggttaaagttcccccactgatc
cagccatttgactttccaccgacttccattggtaaattgatgtacatcgcctgcgtggtg
tcgtccggagacatgcccatacgcatcacgtggcgcaaggacgggcaggagatcgtgccc
tcatcgggcatcaccatcgacacaaaggagttcatgagctccctccagatatccaaggtg
tcgctcaaacacaatggcaactacacctgcattgccagcaatgatgctgccaccgtcagt
acagaaaggcaactcacagttacagtgcctcctcggtttgtagtgcaacccaacaaccag
gatgggatctatggaaaggcaggaatcctaaactgttctgttgatggatatcctcctcct
aaggtcatgtggaagcatgccaaaggtacactagctggaattgggaatccgcagcagtac
caccctgtgcctctgacgggccgtatccagatcatgaataacggctctctactcatcaga
catgtcctggaagaggatcgtggcttctacctctgtcaggcctccaatggcgtgggttcc
gacatcagcaagagcatggtcctcaccgttaagataccagcgatgatcaccagtcacccc
aacaccaccatggctaagaagggtcacgtgaaggagctgaactgcacagccaggggagaa
tggcccatcatcatccgctgggagagaggcgacacggtcattgaccctgaccgcaaccct
cggtactccattaccaccagtcccaatgagaagacggacgaggtgttgtctacactcaag
ctaaagccagcagagcgtgaggattctgtcttcttttcatgtcatgccatcaactcttac
ggagaaggacgaggtcttatccagctcactgtgcaagaacctccagaccctccagagctg
gaggtgcgagaagtgaaagatcgcagtatgaatctccggtggacacagagatttgatgga
aacagcgtcattacctcctacgacattgaatataagaacaagacagattcctgggagctg
aagcatgccactcgaaacatctcccccactaacaatcaggccaacatagtggaccttcac
cctgcctccgtctacagcatccgcatgtactcctacaacgccataggcaagagcgaagcc
agtaaggagctcaccatcagcacagaggaagcacagcctgatggtcctcccatggaggtg
attctgcagccagtgacctctcagagtatcagggtcacttggaaggctcctaggaaagag
ctgcagaatggtgtgatccggggttaccagattggttacagagagaacggcccgggcagt
aatggccagtacagcattgtggagatgaaggccaccggggatagcgaggtctacactctg
gacaacctgaagaagtttgctcagtatggtgtggttgtccaggcttttaacagagccggc
acagggccctccagctcagagatcaatgctaccacactggaagatgtacccagccagcct
cctcagaatgtgcgagccatttctgtaacatcagacgaggcagtcatcacatgggctgaa
ccccccagaatgacgctgcatggtgtattgaagggatatcgtgtcgtgttctgggctgtc
tttccagatggagaatggggtgaaatgcaaaacatcacaaccaccaaagagcaggtggag
ctcagaggcctggagaagttcaccaactacagcatccaggtcctggcctacacccaggct
ggagatggggtccgtagcaacgtactgtatatccaaacccgtgaagattaccccggaccc
ccagctggcatcaaagctgtgccctcctccgccagcagtgtcgtggtgtcctggttaccc
ccccacaaaccaaatggaatcatccgcaagtacacgatctactgctccagccccgggtca
ggccaaccactgcccagcgagtatgaagccaatcccgagctgctgttctacagaatcact
catctcaaccaccggcagcagtacctgatctgggctgcagccgtcaccaccgcgggcagg
ggtaacttcagcgacaaggtcacggtggagccagcggccaaggctccagctaagatcctg
tcatttgggggcacggtgaccactccttggatgaaggaggtgcgactgccctgtagctca
gtaggagaacctacacctactataaaatggaccaaagacagtgaggacacagccatccca
gtgtctttagatggacagcgtctcattttggccaatgggacgctggtgctgcgctctgtc
aaagctgaagattctggttattacacctgcacggctaccaacacattgggctttgacaca
atcatagtcaaccttttggtacaagtccctcctgaccagccacgtctgactgtgtctacc
acctccacctcctccatcactttggcctggataccaggagacaatggaggcagctctatc
agaggttttgtgctgcagtactctgtggataacacggaggaatggaaagatgttttcatc
agttctagtgagcgctcctttaaattagacaacctacgctgtggcacctggtataaagtg
aagctggctgcaaagaacagtgtcggagccggacgcatcagtgagatcattgaggcaaag
acccacggacgagaacctcagttcaacaaggatcagcctgtcttcacccacattaactcc
agccacgcccgtctcaacctgcagggttgggccagtggaggctgtccaatcagcgctgtc
acgctagagtttagaccaaaaggtacctgggcatggcagaatgtacgtaccaatgcgacc
acagacgtgttcctggcagagctgcgtgaggccacctggtatgagctcaagatgaaagcc
tgtaacagcgctggctgtggcaaccagagctcccagtttgcaaccttggactatgatggt
agcacaattccaccaatcaaatcccccctggaaaagaacgatgacgtcaagaagctgttt
tctattggctgtcctgtgattctggtcactctgggtgttgcactgctcttcatcattcgc
aagaaacgcaaggaaaagaggctgaagagactaagagatgccaaaagcctggcagagatg
ctgataagtaaaaacaaccgcagctttgacaccccagtgaaggggcctcctcagggccca
cgattacacatcgacatccccagagtacagctgctgattgaggacaaagaaggcatcaag
caaatcggtgaagacaaagccactatccctgtgacagacacagagttcaaccaaactggg
aaccctcagagcttctgcacaggtgtgtctgtccatcaccctgccctcatccaaaacaca
ggccctttgattgacatgtcagacatccgaccaggaaccaacccagtgtccaggaagagt
gttaagtcggcccatagcatcagaaaccgctactccagtcagtggactttaaccaagtgc
caggcctccacgccagcccgcactctcacctcagactggcgcacagttggctcccagcat
ggcatcactgtcacagagagtgacagctacagtgccagcctctcacaggacacagataag
ggtcgcaacagcatggtgtcgacggagagcgcctcctccacctacgaggagctggcaaga
gcatatgagcatgccaagcttgaggaacacctgcagcatgccaaatttgagattactgag
tgctttatttctgacagctcatctgatcagatgaccacaggaaccaatgacaatgcagac
agcatgacgtccatgagcacaccgtcagagcccggtatctgccgtttcactgcctcgcca
cccaaaccccaggactatgatcgtggcaagaatgtagccgtgccgattccacaccgcgcc
aagagtgactactgcaacttacccctctacatgaagtcagatcccttcttccgaaagcag
tcggagcatcatgacccatgtccggtggttccaccacgtgaagcctctattcgtggcttg
gcccagcgggcataccacacccagggccgccatgtgactatggactctgcaaagcagcag
gccctaagcatgggccactctggcctgtccaacctcacttcctctggggcttcctctgga
ggagcaggaggtggtggaggtagcgggagtggaggagtgtctgctagctctagcagctcc
acactccctcagaggactctcaccatgcccggctcctctgcctcagtggcccagagtgca
gcggcagctgctgctgctaccgctgcagctgctggggtgtcatcatcctccagtggaggt
ggggtagcaggggccacaggagggactcctggaggtgcctcctcatcctcctccaagatg
ggaggatcaagagactctctcctggacagcagctcctcgggcttaggcagactgcagaag
cagagggatggaggggctggggcctactccaagtcgtacacactggtgtag
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