Larimichthys crocea (large yellow croaker): 104918151
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Entry
104918151 CDS
T04659
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04371
Apelin signaling pathway
lco04514
Cell adhesion molecule (CAM) interaction
lco04517
IgSF CAM signaling
lco04518
Integrin signaling
lco04520
Adherens junction
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104918151
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104918151
04517 IgSF CAM signaling
104918151
04518 Integrin signaling
104918151
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104918151
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104918151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104918151
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104918151
04090 CD molecules [BR:
lco04090
]
104918151
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
104918151
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Major cadherins
104918151
CD molecules [BR:
lco04090
]
Proteins
104918151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
RibLong
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
104918151
NCBI-ProteinID:
XP_019115553
LinkDB
All DBs
Position
XXI:complement(19603470..19608691)
Genome browser
AA seq
748 aa
AA seq
DB search
MSGSLKRMKREWVIPAIDYPENDRGPYPKAMVKIKSSKSQKVAITYKISGPGADQPPEGL
FTLDRRSGVLYVTQALDREKTAEYKLLAHALIESIKAEEPMEVIINVIDQNDNAPEFTQN
PFYGGVSESADIGDSIIKVTAVDKDDPLTNNAIIRYTIKAQTPQTQENMFAINPVSGMIS
VVTEGLDREIQPEYKLIIEAADMEGNGLIATCTAIITVTDSNDNAPLFTISYMSTSVPEN
EAGVEVMRLKVTDKDELGTPTTNTKYSIIKGNEKGYFNITTGSNKMEGILKTAKELDFES
IPVFTLLVVVTNEVQFSGPVSTSTATVSVTVVDKNEPPVFSPAEILVRVLEDVEIGSSVA
NLRAKDPDTERKQSIRYELHNDIVRWLSIDKDTGSVKVKSSMDRESHYVKDSKYTVLVLA
YDNDIVPATGTGTLVVNLLDVNDHRPVIKQRKITLCNRDPFPAQLDIVDLDGPGHSGPFT
VELQGEHKNNWTISTNSTSNMAALAPKRELTPRVYNVLFRIYDVGMLYQDSTLEVEVCHC
QGAVSTCFIPYSAPRLLTSSLATSVLGAIFGLLLLLLLLLLLLRRRGRFEKNVPLLEVIP
RDNILYYDEEGGGEEDQEYDLSQLHRGIDNRPEVLCTEVFPIVQSRPCYRLKLQVNEEIG
KFLEDNLHAADSDPTAPPYDCLLVFDYEGGDSEVSSLSSIDSSDSDEEQDFESPQHWGPC
FRRLADLYIGGIEEDDDTETLPGKTEWV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagtttaaaacggatgaagagggaatgggttattccagcaattgactatcca
gaaaatgacaggggtccatatcccaaagccatggtgaagatcaagtcaagcaaaagccaa
aaggtggcgataacctacaagatcagtggaccaggagctgatcagccccctgaaggtctt
ttcactcttgatcggcgatcaggagtgctgtatgtgacccaggcactggatagggagaag
acagctgaatacaagctgttggctcatgcactaattgaaagcattaaggctgaggagccc
atggaggtcattatcaacgtcattgaccagaatgacaacgctccagaatttacacagaac
cctttctatggtggagtgagtgaaagcgccgacattggtgactccatcataaaggtaaca
gcagtggataaagatgacccgctgacaaacaatgctataataaggtatacgattaaggct
cagacacctcaaacacaagagaacatgtttgctataaacccagtgagtggaatgatcagc
gttgtgacagaaggactggacagagagattcagcccgaatacaagcttatcatcgaagct
gccgatatggagggaaatgggctgatagccacctgcactgctatcattactgtaactgac
agcaatgataatgctccattattcaccatctcatatatgtccacatcagtccctgagaat
gaggctggagtggaggtaatgagactaaaagtaactgacaaggatgagttaggaactccg
actaccaacaccaaatactcaataattaaaggcaacgagaagggatatttcaacatcacc
acaggctccaataaaatggagggaatcctcaaaacagccaaggagctggattttgagagc
atcccggtctttactctgctggtggtggtgacaaatgaggtgcaattttctggaccggtg
tcgacctcgacagccacagtctctgtaacagtcgtggacaagaacgagcctcctgttttt
agtccagcagagatccttgttagagtcttagaagatgtggaaatagggagctctgtggcc
aacctcagagctaaggacccagacacagagaggaaacagagcatcagatatgaactacat
aatgacattgtcaggtggctgagtattgataaagacacaggatcagtcaaagttaaaagc
agcatggacagagagtcacactatgtcaaagacagcaaatacacagtcctagttttggct
tacgacaatgatattgtcccagctacagggactggaactctggttgtgaatttgttagat
gtgaatgaccatcgtcctgtgatcaaacagaggaaaatcactctatgcaatcgtgacccc
tttcctgcccagcttgatatagtggaccttgatggaccaggtcactctggaccgtttact
gtggagcttcaaggagagcacaagaacaactggactattagcaccaattccacaagcaac
atggcagccctagcccctaaacgggagttgacaccaagagtctataatgtgctctttcgt
atctatgatgttggcatgctttatcaagacagcactctggaggtagaagtgtgccattgt
caaggggctgtctctacctgcttcatcccatattctgcccctcgtctgctcacttcttct
ctcgcaacctcagttcttggagcaatctttggtctactgctactgctcttgctgctgctg
ttgttgctgagaaggaggggaaggtttgagaagaatgttcctcttcttgaagtcataccc
agagataatatcctctactatgatgaggagggaggaggtgaagaggaccaggagtatgac
ctgagccagctccacagagggatcgataaccgtcctgaagtcctctgtactgaagtgttt
cctattgtccagagccgcccatgctaccgcctgaagctccaagtcaatgaagagattgga
aaattccttgaggataacctgcatgctgcagacagtgaccccacagctcctccttacgac
tgtcttctggtctttgactatgagggcggtgactcagaggtgagttctctcagttcaatt
gactcctcagactcggatgaagagcaggactttgagagcccgcagcactggggaccatgt
ttcagaagactggctgacctgtacattggtgggatagaggaggatgatgacacagaaaca
ctgcctggaaaaacagaatgggtctga
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