Larimichthys crocea (large yellow croaker): 104918172
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Entry
104918172 CDS
T04659
Symbol
vav3
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X2
KO
K05730
guanine nucleotide exchange factor VAV
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04517
IgSF CAM signaling
lco04519
Cadherin signaling
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104918172 (vav3)
04519 Cadherin signaling
104918172 (vav3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104918172 (vav3)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104918172 (vav3)
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Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
CDC24
MutS_III
SH2_1
PH_10
LZ3wCH
Prok-RING_1
SRA1
ANC1_spectrin
C1_2
Motif
Other DBs
NCBI-GeneID:
104918172
NCBI-ProteinID:
XP_010728121
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Position
XXIII:15715225..15802508
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AA seq
837 aa
AA seq
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MMEYWRQCALWLINCKVLPANHRVTWESAQVFDLAQTLRDGVLLCHLLNNLRPQSINLKE
INLRPQMSQFLCLKNIRTFLAACSEIFGMKKSELFEAFDLFDVRDFGKVMDTLSKLSHTA
ITQQAGIRPFPSEDSVEDEEIYNHLEDLIDEKGVEDEEDLYDCVYDDEDGGEIYEDLMKT
EAIPPPAFQKQAETDIRSCCLTEIKQTEEKYTETLESIEKHFMTPLTMFLTMTEMEKMFV
NIPDLVKVHKCLLLEIQDSVHHRSAQNLYQIFITFKERLLIYGKYCSHVETAIATLDCIC
KDREDVRMKLEECSKRANYGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHEAADKRNLRM
ALDAMKDLAQYVNEVKRDNETLREIDQYQKSIENLNQPLSNYGRPKGDGEVRVTSVDKRA
KQDRHIFLFDAAVIVCKRRGDNYEMKEVIDLHLFKITNNPTSDKENRKWSYGFYLTHNQG
QSGFEFFFKTKELKKKWLEQFGMAISNIRPENATNNFHEFHMHTFERITSCNSCHMLLRG
IFNQGYLCSKCGLGAHKECLGRFGCCGKTDPGSVRTQGKDRDPGLPKMLVIRNYFGVPSP
TSGPALSIQTGDIIELICADLHSPWWQGKILSTKEVGFFPSDAVKPCPCVPKPVDYSTQP
WFAGPMERLQAEAELINRINSTYLVRHRSREYTEYAISIKYNNDVKHIKILTKEGCFHIA
ENKKFRSILELIEYYKHHSLREGFRSLDTTLQFPYREPENAAMHRLNRTGSNMLTPKVIG
VAIARYDFSSRDTRELSLQEGDVVKIYTKSGANGWWRGEVNGRVGWFPSTYVEEGEE
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtattggaggcaatgcgcgctgtggttaattaactgcaaggtgcttccagct
aaccaccgggttacatgggagtctgcacaggtatttgacctggcccagaccctccgggat
ggagtcctcctctgccatctactcaacaacctaagaccccagtccatcaacctaaaggag
atcaacctccgaccgcaaatgtcacagttcctgtgcctgaagaatatcaggactttcctg
gcagcgtgcagcgagatatttggcatgaagaaaagcgagctgttcgaggcctttgacctt
tttgacgtcagggactttggaaaggttatggacacactatctaaactttcccacacagcc
atcacacaacaagctggaatcaggccttttccatccgaagacagtgttgaagatgaagaa
atttacaaccacctggaggaccttatagatgagaagggggtggaggatgaggaggatctg
tatgactgtgtgtatgacgatgaagatggaggagagatctatgaggacctgatgaagaca
gaagccatccctcctccggcatttcagaaacaggcagagactgacatcaggagctgctgt
ttaacagagatcaagcagacggaggagaaatacactgagaccctggagtctatagagaag
cactttatgacgcccctcaccatgtttttaaccatgactgagatggaaaagatgtttgtg
aatatcccggatctggttaaagttcacaaatgtttactgctggaaatccaagactcagtt
caccacagaagtgcccagaacctttaccagatcttcatcacgttcaaagagaggttgttg
atctatgggaaatactgcagccatgtggaaacagccatcgccactctggactgcatctgc
aaagacagagaggacgtacgcatgaagttagaggaatgttcaaagagagctaactatggc
aagttcacactgagagatctgctggtggttcctatgcagcgagtcttgaagtatcacctc
ctcctgcaggagctggtgaaacacacacatgaggccgctgacaagcgtaatctgcggatg
gcattggatgctatgaaggacttggctcagtacgttaacgaagtcaagagggacaacgag
acgttgcgagaaatagatcagtatcagaaatccattgaaaatctgaatcagcctctgagt
aactacgggagacccaaaggtgacggggaggtacgggtgacctcggtggacaaacgagcc
aaacaggacaggcacatcttcctgttcgatgcggcggtgattgtatgtaagcgtcgagga
gacaactatgagatgaaagaagtcatcgacctgcacctcttcaagatcaccaacaacccc
acgtcggacaaggagaaccgaaagtggtcctacggattctacctcactcacaaccagggc
cagagcggctttgaatttttcttcaagaccaaagagctgaaaaagaagtggctggaacag
tttggcatggccatatccaatattcgtcctgagaacgccaccaacaacttccatgagttt
catatgcacacctttgaaaggatcacctcctgcaactcttgccacatgctgctgaggggc
atctttaaccagggctacctgtgctccaagtgtggtttaggtgcccataaagaatgtctg
ggccgctttggctgctgcggaaaaacagatcctggctccgtcagaactcagggcaaagat
cgagatccaggtctgcccaagatgctggtaatcaggaactacttcggtgtgccaagccct
acgtctggtccagcactcagcatccagacgggtgacatcatcgaattaatctgcgccgac
cttcacagcccctggtggcagggcaagatcctatcgacgaaagaggttggcttctttcca
agcgacgctgtgaagccttgcccatgtgtcccgaaacccgtcgattactccactcagcct
tggtttgcggggcccatggagaggctccaggcggaggcggaactcatcaacaggatcaac
agcacctacctggtacgccaccgcagcagagagtacacagagtacgctataagtataaag
tacaacaacgacgtgaagcacataaagatcctgaccaaggagggctgcttccacatcgca
gaaaacaagaagttcaggagcatattagagctgattgagtactacaaacaccactccctg
agagaaggttttaggagtctggacaccacactgcagtttccttaccgggaaccagagaac
gctgctatgcaccgcctcaaccggacaggtagcaacatgttaacgccgaaagtgattggc
gtggcgatcgcgcggtacgacttcagctcacgtgacacccgggagctctcgctgcaggag
ggtgacgtggtgaagatctacacaaagtcaggggccaacggctggtggaggggcgaggtc
aacggcagggtcggctggttcccatccacatacgtagaggagggtgaggagtga
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