Larimichthys crocea (large yellow croaker): 104918210
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Entry
104918210 CDS
T04659
Symbol
spast
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104918210 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104918210 (spast)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104918210 (spast)
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104918210 (spast)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104918210 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
TIP49
AAA_22
AAA_5
MIT
AAA_16
Mg_chelatase
AAA_24
AAA_14
IstB_IS21
NPHP3_N
nSTAND3
DUF815
AAA_2
AAA_33
AAA_19
Motif
Other DBs
NCBI-GeneID:
104918210
NCBI-ProteinID:
XP_010728178
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Position
III:complement(11296591..11301700)
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AA seq
473 aa
AA seq
DB search
MNASKSKDNGEVIKNYHTQAFEYISKALRIDEDDTGDKEQAMQWYKKGIAVLERGIAVKL
TGQGDQYDRAKRLQDKMNENLTMAKDRLVHLDATLASSRRNSDPPKTSNHVHPQPKSVPK
SQPAVRGVSTNIRPSTAVRPPSRPTEPKVTPRVGRAQNGKPAAVKQPTKMKNFKNVDSKL
ANLILNEIVDSGASVSFEDIAGQKLAKQALQEIVILPALRPELFTGLRAPARGLLLFGPP
GNGKTMLAKAVAAESKATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFIDEVD
SLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLRRFAKRI
YVALPDAETRFTLLKNLLEKQGCPLSKNELSTLAKKTEGYSGSDLTSLAKDAALGPIREL
GPDQVRSVAASEMRNIKMKDFEESLKRIKPSVSPATLDMYSKWNKDFGDTTAF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaagtaaaagcaaagacaacggcgaagttattaaaaactaccacacgcaggcg
tttgagtacatctcgaaggcactgaggattgacgaagatgacacaggagacaaggagcag
gcaatgcagtggtacaagaaagggattgctgtgcttgagagggggattgcagtaaagctc
accggacaaggagatcaatatgaccgagcaaagagacttcaagataaaatgaatgaaaac
ctcaccatggcaaaagacagacttgttcatttagatgcaaccttggcgtcatctagaaga
aatagtgatcccccaaagacctcaaaccacgtccatccgcaaccaaagtctgtacctaag
agtcagcctgcagtgcgaggtgtgtccaccaacatcaggccctccactgctgtcagaccc
ccatctagacccactgaaccaaaggtgactccacgggttggaagagctcaaaatggcaaa
ccagcagctgtgaaacagcccacaaagatgaaaaacttcaagaatgtcgacagcaaactg
gccaacttgattctaaatgaaatcgtcgacagtggagcatctgtgtcctttgaagacatc
gcaggacagaaactggccaagcaagcacttcaagagattgtcatcctccctgctttgaga
ccagagctcttcactggcctgagagctccggcacgtggcttgcttttatttggcccgcct
ggaaatgggaaaaccatgctggccaaagcagtcgcagctgaatcaaaagccacattcttc
aacatcagtgctgccagtttgacctctaaatatgtgggagaaggcgagaagcttgtacga
gctctgtttgcggttgccagagaattacagccctccgtcatctttatcgatgaagtcgac
agcttgctctgtgaaaggagggagggagaacacgacgcctctcgtcgattaaaaactgag
ttcctcattgaatttgacggggtgcagtcaggaggggacgacagggtgcttgtaatggga
gcgaccaacagaccccaggagctcgatgaagcagtactaagacgctttgcaaaaagaatt
tacgtggcgttgccggatgcagagacgagattcacactgttgaaaaatcttttggaaaaa
caagggtgtccactgagcaaaaatgagctgtccactcttgcaaaaaagactgaaggatat
tcaggaagtgatctcacgtcgttagccaaagatgctgcactggggccgattagagagttg
ggcccagaccaagttcgaagtgtggctgctagtgagatgcgtaacatcaagatgaaagac
tttgaggaatccctgaagcgcattaagcccagtgttagcccagcgactcttgacatgtat
agcaaatggaacaaagattttggagacacaacagctttttga
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