Larimichthys crocea (large yellow croaker): 104918250
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Entry
104918250 CDS
T04659
Name
(RefSeq) fibronectin isoform X2
KO
K05717
fibronectin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04518
Integrin signaling
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104918250
04518 Integrin signaling
104918250
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104918250
09142 Cell motility
04820 Cytoskeleton in muscle cells
104918250
04810 Regulation of actin cytoskeleton
104918250
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104918250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104918250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104918250
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104918250
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104918250
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
104918250
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
104918250
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104918250
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
104918250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_PBP1
fn2
Fn3_Dep-1_2nd
Fn3_Dep-1_3rd
NDNF
Interfer-bind
Fn3_ROS1
FN3_Tor_3rd
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
104918250
NCBI-ProteinID:
XP_010728230
LinkDB
All DBs
Position
VIII:774541..793823
Genome browser
AA seq
2443 aa
AA seq
DB search
MTGSPLTGLLVALCVSSAVHGSPKSKRQSGQYQVYPELQDRMAVSPVGCEDNGRSYRPNE
QWEKPYRDSTLLCTCNGVAGIKCKTKPEVEESCYDKYNARTYRVGETYERPKDGMMWDCT
CIGSGRGKISCTIANRCHEGGKSYKIGDTWQRPHDTADYMLECVCLGNGKGEWTCKPVAE
RCYDNTAASSYVVGETWEKPYQGWMMLDCTCLGEGNGRITCSSRNRCNDQDTRRSYRIGE
TWTKKDTSGQHLQCQCLGNGRGEWKCERHNAGRALGTCRTDSGVTYYDGQRWFRTQGSKQ
ILCTCLGNGVSCQESEARNTVYGGNSNGQPCAFPFVFMGKTYYSCTSDGRTDGQLWCSTS
SDFEKDQQYSFCTEKNAVVVTRGGNSNGGLCHFPFLYSGRNYTECTADGRRDGMRWCGTT
YDYDTEQRYGFCPMAAHEELCTTSDGVMHRVGDKWDKRHDVMGHMMECTCLGNGRGEWSC
VAYSQLRDQCVVDGLTYEVNQEFSKRHDEGYMMNCTCFGQGRGRWKCDAIDQCQEPQTRA
FHQIGDTWDKVIHNIRYRCYCYGNGIGEMRCEPQQTYQDGHRPVQVIITEAGKQPDSHPI
QWNPPSSVHITQYILKWRIKNSHAPWREATVPGHLNSYTISGLRPGVTYEGQLISILRYG
RREVTRFDFTTTHGSLETSEGETSQPAPVVDTSESVTEITSNSFVVSWTSASSTISGFRV
EYELSEDGAKPKVLDVPRNSNSVTISDLLPGRRYNVNVYELPDQGQPNLILTTSQTTAPD
TPAQHTVNEVGENSIRISWTRPQAPITGYRVVYTPSVEGSSTELNLPESETSVNLVDLRP
GLLYNITIYAVEEDQESEPVFVQVNTVGSATPEEVPAPTELQFYEVTDAKITITWTGPPS
EVTGYRVTFSPIGPDGTEIRPLPLPVSPNAYADITHLQPGTLYRFYIYAINGGVESEPLV
GERATKPDAPTNVRFTDVGHDSALVIWEAPRAIVTGYRLYLSIEGSTPVEKRIPGRVAQY
PLRNLRPDTQYTAVLHSELDNELSEGVTSYFTTTPQMGNAPNFNTEVTDTSIIVSWIPVR
RFSYKLSVLPSQVGESPREATSDTGRVYVSDLIPGTQYTYSVQPIFNGRNRGNPITRNVV
TSLSPPTDLRVESNPDTGELTVHWVASKTPGISGYRVTSTPNNGQRGNSLDEFVTAGQTY
IILESLNPGADYNISVYTTKGHLESVPVSTVITPEIPKPSHIDFVDITDTTIGLRWIPLK
YTTITAYRISVVASGESLPIFQDLVEASTGYYTIHGLEPGVDYDISIFTLTEEGESEPTT
YTKQTQAALPSPTNLQFGGVGPDHIRVTWTVPHVTTPSDISRFVIRYHPVATDDDIKEVN
VGGATNTFLLQNLLPNTEYRVSVVCVYGERESQPVTGTQTTTLDSPTGLDFSDISTNSFT
VHWVAPTSSITGYRIRYQKTSGGRTRDERLPPSRHFFTLTGLTPETEYLVHVYAVNRNQE
SQPLTGTQATISDAPTDLEVTSSTPTSITIRWDAPSVRVNNYRITYGGTSGESPQEFIVP
GTQTTATITGLKPGTDYTITVYAVSTRGDSPASNTPVYITHRTDTESPTNMKLTDVSDNA
ITVRWSPAQGPIRGYRVTSVPKNGLGPSYSEVVGADQTETTFTGLMPTVEYVVSVYALGN
DGQPSSPLVENAITAMDRPKDLTFSDISSTSMRITWDSPDGIVTSYRILYSSPEEGEREL
RPAPRGDQDSVVLRGLRPGTDYTVKVIAFHDRIQSKPLVGTQATVIPAPTNLAITEVGPS
TFTVSWRAPSAGLTGYRVVVNPKNINAPTKELNVAPDTTRVVVPGLMVATTYQIYVYALK
NSVTSRPLEGETTTLEDVSPPRRVRISDVKDTSFTLTWRSKMETITGYLIEARPNSNFYP
TIRKTIPGDSNTYTLTGLQPGTTYYVSLYTLNGNTKSAPFSLTIQTAEPVVQAPTDIRFT
SLTPTSISFTWQPPATHITGYYITYEEAGGGPQELTPRPHAGQNYASISDLRPATEYTIK
IIAIQNTKRSTPLVGKIRTQPDSLLPPPLPDRPGSVGDKLDVPETDLDNQVQVVGNSGQD
GQSGQSQHVEYTEYNNNGDNRYDGSSGSLPSTYGQVREPLVFVPLPDAEGRRLPILKMNV
PIGSTFGNETGVPQEAQTQTSISWKPYRQSNAYLVSCHPLTNLNEKMFQVRLPGTATTAT
LIGLTPGANYNVIVEALLGALKHKILEQVITAGNTIPEGVPSTKDQCYDAFTATYHDVGG
EWERMSETGFKLWCRCLGLGSGHFRCDSSKWCHDNGVNYRIGEKWDRRAENGHLMSCTCL
GNGKGEFKCEPHDSVCYDDGKAYQVGNQWQKEYLGAICTCTCFGGQQGWRCENCRRPGAD
VDASLLQPVRYGDNTLRKNIHCPIECLRPDLLADAHAPPNPLE
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atgactggtagcccactaacagggttactggttgcgttgtgcgtaagcagcgcagtccac
ggttcaccaaagagcaaaagacaaagtggccagtatcaggtgtatcctgagttgcaagac
aggatggctgtttctccagtcggctgtgaagataacggtcgatcatacagaccgaacgag
cagtgggagaaaccctaccgtgatagtactctgctgtgcacctgcaatggagtagcaggc
atcaaatgtaaaactaaacctgaagtggaggagtcctgttatgacaagtacaatgcccgg
acataccgggtcggtgaaacctacgagagaccaaaggacgggatgatgtgggactgcacc
tgtatcggttctgggcgaggcaagatcagctgtaccattgcaaaccgttgccatgaaggt
gggaagtcttataaaattggggacacttggcagaggcctcatgacactgctgactacatg
ctggagtgtgtgtgtcttggaaatggcaaaggagagtggacctgcaaacctgtggctgag
cgatgctacgacaacaccgctgcatcatcatacgtcgttggggagacctgggagaaaccg
taccaaggctggatgatgctggactgcacatgtctgggagagggaaatggacgcatcaca
tgctcctcaaggaaccgttgcaacgaccaggacaccaggaggtcctaccgtatcggagag
acatggacaaagaaggacacaagtggacaacacctgcagtgtcagtgcttaggaaatggt
cgtggagagtggaagtgtgagagacacaacgcaggcagagctttggggacatgccgcaca
gactctggagtcacctactacgatggtcagcgctggttcagaacccaggggagcaagcag
atactctgtacctgtctgggcaacggagtcagctgtcaggagtcggaggccaggaacacg
gtgtatggtggcaactccaatggtcagccatgtgcattcccattcgtcttcatgggaaag
acctactactcctgcacctcagatggacgcacagatgggcagctgtggtgctctacatcc
tcagactttgagaaagaccagcagtactctttctgtactgagaagaatgccgttgtggta
acccgaggtggaaactccaacggtggtctgtgccacttccctttcctctacagtggacgc
aactataccgaatgtaccgctgatgggcgccgtgatggcatgaggtggtgtggtaccacc
tacgactatgacacagagcagcgctatggattctgccccatggctgcccatgaggagttg
tgtaccaccagcgatggagtgatgcaccgcgtaggcgacaaatgggacaaacgtcacgat
gtcatgggtcacatgatggagtgcacatgtctgggtaacggccgtggagagtggagctgt
gtcgcttactcacagctgcgagatcagtgtgttgttgatggcttgacctatgaagtaaac
caggaattctccaagcgccacgatgagggctacatgatgaactgcacctgctttggtcag
ggccgtgggcgctggaagtgtgacgctatcgatcagtgtcaggagccgcaaactagggca
ttccaccagattggagacacatgggacaaagtcatccataacatccgctatcgctgttat
tgctatggcaacgggattggagaaatgagatgtgaacctcagcaaacctaccaagacggc
cacagacctgtccaggtgatcatcacagaggcagggaaacagccagactcccacccaatt
cagtggaaccccccttcatctgtccacatcacccagtacatcctcaaatggagaattaaa
aattcccatgcaccctggagagaggccaccgtccccggccacctcaactcctacaccatc
agtgggctgcgtccaggcgtcacctatgagggtcagttgatcagcatcctgcgctacgga
cgccgcgaggttacgcgcttcgatttcaccactacccatggttctttggaaacatcagag
ggagagacgagccagcctgctccagtggtggacacttccgagtctgtgacagaaatcacc
tcaaacagcttcgttgtgtcctggacgtcagcctcttctaccatttctggcttcagggtg
gagtatgagctcagtgaggacggggccaagccgaaagtcctggacgttcctcgcaattcc
aattctgtcaccatctctgacctcctgcccgggcgcagatacaatgtcaacgtctacgag
ctcccagatcagggacagccaaacctcattcttactacctcacagaccacagctcctgac
acccctgctcagcacacagtcaacgaggtgggagagaactccatccgaattagctggacc
aggcctcaggctcctattactggttaccgtgtggtgtacacaccatcagtggaaggaagc
agcactgagctgaacctgccagagtcagagacttcagtgaacctggttgaccttcgcccc
ggtcttctttacaacatcaccatctatgctgtggaggaggaccaggagagtgagcctgtt
tttgtacaggtcaacactgtaggatctgctacaccagaggaggtccccgcacccacagag
ctgcaattctacgaggttacagatgcaaagatcaccatcacctggaccggtccacccagc
gaggtgaccggttacagggtgaccttctccccaattggcccagacggtactgagattagg
cccctgccactgcccgtctcacccaacgcatatgctgatatcacccacctgcagccaggc
acactgtatcgcttctacatctacgccattaatggtggagtggaaagcgagccgcttgtg
ggagaaagggctaccaaacctgatgcgcccaccaatgtgcgtttcactgacgtcggccac
gacagtgcacttgttatctgggaggccccccgcgccattgtcactggctaccgtctatat
ctgagcatcgaaggctctacccccgtcgagaagaggatcccaggcagggttgcccagtac
cctttgaggaatttacgtccagacacccagtacactgccgtcctccactctgagttggac
aatgagctcagcgagggagtcacttcatattttaccaccactcctcagatgggaaatgct
cctaattttaatactgaagtcactgatacctccatcatcgtcagctggatacctgtccgc
agattcagctacaagctttctgtgctccccagccaggtaggcgagtctcccagagaagcg
acctcagacactggacgtgtatatgtttctgacttgattcctggaactcagtacacatac
agcgttcagcccatcttcaatggacgcaaccgtggaaaccccatcacccgcaacgttgtc
actagcctgtctcctcccactgaccttagagtggagtccaacccagacacaggagagctc
actgtccactgggtagcctccaaaacaccaggcatctcaggctacagagtgacgagcacg
ccaaacaacggccagcgaggaaactccctggatgagtttgtcactgctggtcaaacctat
atcatactagagagcctgaatcctggggcagattacaacatcagtgtctacactaccaag
gggcatttggagagtgtgcccgtgtccactgttatcacaccagaaatccccaaaccaagt
cacattgactttgtcgacattactgacaccaccattggcctacgctggatccctctgaag
tatactaccattactgcttaccggatatcggtagtagcatcaggcgagagcttgccaatt
tttcaagatttggtggaagcatctactggttattacaccattcatggtttggagccgggc
gtggactatgacatcagtatcttcactcttacagaggagggggaaagcgagccgaccaca
tacacaaagcaaacacaagctgcccttccatctcccaccaacctacagtttggaggggtg
ggccctgaccacattagggtgacatggacagttccccatgttaccacaccaagcgacatc
tctcggtttgttattcgctaccaccctgtagccacagatgacgacatcaaggaagttaat
gttggcggagcgaccaataccttcctgctgcagaacctgctgcccaacactgagtatcgt
gtcagtgttgtgtgtgtgtacggtgaacgagaaagtcaaccagtcacagggactcagacg
acaactttggattctcctactggtctggacttctccgacattagcaccaactccttcact
gttcactgggtggctccaacttcttccatcactggctatcgcattcgctatcagaagacg
agtggagggcggaccagagatgagaggctgcccccaagtaggcacttcttcactctgacc
ggactgacaccagagacagagtatctggttcatgtgtatgctgtcaacaggaatcaggag
agtcagcctctgactggcacacaggccaccatctctgatgctcccactgacctggaggta
acatcttccacccccaccagcatcaccattcgttgggacgccccctctgtgagagtgaac
aactacaggatcacctatggaggcacaagtggtgagtctcctcaagagttcatagtccca
ggcactcagaccacagccaccatcactggactgaagcctggtaccgactacaccatcaca
gtctatgctgtttccacaagaggggacagccctgcctccaacaccccggtctacatcacg
cacaggactgataccgagtcccctacaaacatgaaactgactgatgtgagcgataacgcc
atcacagtgcgctggtctcctgctcagggaccaatcagaggctacagggtcaccagtgtc
cccaagaatgggctgggaccctcctactctgaggtggtgggtgctgatcagacagagacg
acgttcacaggtctgatgcccactgttgagtatgtcgtgagtgtttatgctctgggcaat
gatggacaaccctcttcgcccctggtggagaatgctatcactgctatggaccgtcccaaa
gacctgaccttctccgacatcagctccacctccatgcgcatcacttgggacagcccagac
ggcatagtgacatcatatcgcatcctgtactccagcccagaggagggcgagagagagctg
cgtccagcacccagaggtgaccaggatagtgtggtgctgagaggccttcgccccggtaca
gactacactgttaaagtcatcgccttccatgaccgcatacagagcaaaccactggtggga
acccaggcaacagtaatccctgctccgaccaacctggcgatcacagaggtaggtccctcc
actttcactgtgtcatggcgagcccccagtgcaggcctgacaggctaccgtgtcgtcgtc
aaccccaagaacatcaacgcccccaccaaagagttgaacgttgctccggacaccacacgt
gttgttgtaccagggctcatggtggcaaccacataccagatatatgtctacgctctgaag
aactctgtcaccagtagaccactcgagggagagacgaccacactggaagatgtaagtcct
ccaaggcgtgtgcggatctctgacgtgaaggatacttctttcacactgacttggcgctcc
aagatggaaaccatcactggttacctcatcgaggccagacccaacagtaacttctacccc
accatcagaaagactatcccaggagactctaacacatacactctcacaggtctgcaacca
ggcaccacgtactatgttagcctgtatactctgaatggcaacacgaagagcgccccattc
agtctcacgattcaaacagctgaaccagtggtccaggctcccactgacatcaggttcaca
tctttaacccccacctccatctccttcacctggcagccacctgccacgcacatcacagga
tactacatcacctatgaggaggcaggcggaggaccacaagagctcaccccaagaccccac
gccggccaaaactacgcctccatatctgacctgcgaccagccacagagtacactataaaa
atcattgccatccagaacacaaagaggagcacacctctggtcggcaaaatcaggactcaa
ccagattccttgcttcccccgcctctgcccgaccgccctggaagtgttggtgacaagctg
gatgtgcctgaaactgacttggacaaccaagtccaggttgtaggaaacagtggccaggat
gggcagagtggtcagagccagcatgtggagtacacagagtacaacaacaatggagacaac
agatatgatgggagcagtggcagcttaccgtctacctatgggcaagtacgtgagccctta
gtctttgtgccccttcctgatgcagagggccgcagactgcccatcctgaagatgaatgta
cccatcggctccacatttggtaacgagaccggagtgccacaagaggcccaaactcagacc
tccatctcctggaagccttacaggcagagcaacgcctacctggtgtcctgccatcctctc
acaaacttgaatgagaagatgttccaggtccgcctcccaggcacagccaccactgccacc
ctgatagggctcacccctggagcaaactataatgtgattgttgaggctctgttgggggcg
cttaaacataagatcctagagcaggtcatcacggctggaaacacaatcccagagggagtc
ccctccactaaagaccaatgttatgatgcctttactgcaacctaccatgatgttggtggt
gaatgggagcggatgtctgagacaggctttaagctgtggtgcaggtgcctgggcctggga
agtggccacttcagatgtgattcatctaagtggtgccatgacaacggtgtcaactatcga
attggagagaagtgggaccgccgtgcagaaaatggtcacttgatgagctgcacttgtttg
ggaaatggcaaaggagagttcaagtgtgaaccacatgactcagtgtgctacgatgatgga
aaagcttaccaagtaggaaaccagtggcagaaggagtacctgggcgctatctgcacctgc
acatgctttggtggacagcagggctggagatgtgagaattgccgcagaccaggtgctgat
gtcgatgccagtctgctgcagcctgttagatatggagacaacacactacgcaagaatatt
cattgccccatcgagtgcctccgtcccgacctgctggcagacgcacacgctcctccaaat
cctctggagtaa
DBGET
integrated database retrieval system
