Larimichthys crocea (large yellow croaker): 104918253
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Entry
104918253 CDS
T04659
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104918253 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104918253 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104918253 (itgb6)
04810 Regulation of actin cytoskeleton
104918253 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104918253 (itgb6)
04515 Cell adhesion molecules [BR:
lco04515
]
104918253 (itgb6)
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
104918253 (itgb6)
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin beta subunits
104918253 (itgb6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
104918253
NCBI-ProteinID:
XP_010728237
LinkDB
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Position
VIII:complement(713574..725841)
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AA seq
780 aa
AA seq
DB search
MGLLLLSLILRYWINTVEGSCSAGSALTCDKCLQLSSHCAWCTQENFTDWFSVSERCDTL
DILLEKGCARGHLEFPVSKGQILQDHPLGKKTGNVNSTQISPQKMALKLRPGSQVTFQVK
IQHTEDYPVDIYYLMDLSASMTDDLVKIKDLGSTLSKEMANLTSKFRMGFGSFVEKPILP
FIKITEEELANPCSEVGSTCLPTFGYKHVLSLTSNTDKFNEIIAMQRVSANIDIPECGFD
AIMQAAVCEDKIGWRNDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGKCHLDINNEYSMS
TVLEYPTLGQLIDKVVENNILLIFAVTEQQRRNYEKYADLIPGATVGVLATDSRNILELI
VTAYKELRSEIELEVLGDTEELQMSFTAICPNGTVLPDLKRCSNIKPGETVVFNVTVALP
GCLPGVRRFSLKPVGLQDSLEVELESLCSCDCRQPPEANSSQCIEGQGAFQCGVCVCQPG
FLGAGCECNEESALLANCLANNESEICSGQGQCYCGQCACHESSFGRIYGRYCECDNYSC
VRFRGELCGGHGVCDCGECQCESGWTGEYCNCSTSTETCMSEDDALCSGRGRCECGQCVC
SVPGASGDKCEKCPTCGDACSSARTCVECHLEDKDDAELCDQKCSVPKISINTTADYDNS
LSMQCKLMTENECWISFNVVGSEMGTTAYDLQIYGCPEPPNIPMIILGVSLSVVCIGLIL
LGVWKVLVSVHDRKEVAKFEAERSKAKWQSGTNPLFKSSTSTFKNVTYKNTEKVITLDHY
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggggcttctactgctgagcctgattcttcggtactggatcaacaccgtggagggatca
tgttcagctggcagcgctctgacttgtgacaagtgtctgcagctcagttctcactgtgcc
tggtgcacacaggagaatttcacagattggttttcagtcagcgaaagatgtgacacactg
gatatcttactagaaaaaggatgtgccaggggtcatttggagttccctgtttccaaaggc
caaatcctgcaggatcacccactcgggaagaagacgggcaacgttaacagcactcagatc
tccccacagaaaatggcactcaagctgagacctggtagtcaggtgacttttcaggtcaag
attcaacacacagaggactatcctgtggacatctactacctgatggacctgtcagcatcc
atgaccgacgatctggtgaagatcaaagatctaggctccactctgtctaaagagatggcc
aacctaaccagtaaattccgaatgggctttggctcttttgtggaaaaacccatcctgcca
tttatcaagattacagaagaagagcttgccaacccttgcagcgaggtaggctcaacctgc
ctgccaacttttggatataaacacgtcttgtctctgacgagcaacactgacaaatttaac
gagataatcgcaatgcagcgtgtatctgcaaatatcgatataccggagtgtggctttgac
gccatcatgcaggcagctgtttgtgaggataagattggctggaggaatgactcgatgcgt
ttgctggtgtttgtcagtgatgctgactcacactttgggatggacagtaagatggctgga
attgtgatacccaacgatgggaagtgtcatctggacatcaataatgaatattcgatgtcc
acggtgctggagtatccaactcttggtcagctgattgataaagtggtggagaacaatatc
ttgttgatatttgctgtgacagaacaacagaggcgcaactatgagaaatatgcagatctc
atacctggcgccacggttggagtcttggcgacagattcgcggaacatcctggaactgatt
gtaacagcatacaaagaactgcgttcagagatcgaactggaggtccttggagacacagaa
gagctgcagatgtcttttacagccatttgcccaaatgggactgtcctccctgatctaaaa
cgctgctccaacattaaacctggagagacggtagtgttcaacgtgactgtggctctccca
ggatgcctaccaggagtccggcgcttttccctaaaaccggtgggcttacaggacagtttg
gaggtggaactggagtctctttgctcgtgtgactgccggcagcctcctgaagcaaacagc
agccagtgtattgaaggccaaggggctttccagtgtggtgtatgtgtgtgtcagccaggg
ttcctgggagcagggtgtgagtgcaatgaggaaagcgctttgttggctaattgtcttgca
aacaatgagtctgagatatgcagtggtcaggggcagtgctactgtggacaatgtgcatgt
catgaatcgagctttggacgcatctatggacgttactgcgaatgtgacaattactcctgt
gttcgattccgtggggagctctgcggaggccacggagtgtgcgactgcggggagtgtcaa
tgtgaaagtggctggacgggggagtattgtaactgcagcaccagcaccgaaacttgcatg
tcagaggatgacgcactgtgcagcggccgggggagatgtgagtgtggccagtgtgtctgc
tctgtacctggagcatctggggacaagtgtgagaagtgcccaacatgtggtgacgcctgt
agttctgcaagaacctgtgtagagtgccatctggaagataaggacgatgccgagctgtgt
gatcaaaagtgcagtgtccctaaaatttccatcaacacaacagcagattatgacaacagc
ctgtctatgcaatgcaagctgatgacggagaatgagtgctggatctcatttaatgtggta
ggaagtgagatggggaccactgcctacgatctccagatatacggatgcccagagcctcct
aacatccccatgattattctgggggtctctctttctgttgtgtgtatcggcctgatcctg
ctgggcgtgtggaaggtcctggtgtcagtccacgaccgtaaagaggtggccaagtttgag
gctgagaggtcaaaagcaaaatggcagtcggggaccaaccctctattcaaaagctcaaca
tctacattcaaaaatgtaacttataagaacacagagaaggttattacactggaccactac
tga
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