Larimichthys crocea (large yellow croaker): 104918317
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Entry
104918317 CDS
T04659
Symbol
zc3h12d
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104918317 (zc3h12d)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104918317 (zc3h12d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RE_BstXI
Motif
Other DBs
NCBI-GeneID:
104918317
NCBI-ProteinID:
XP_010728334
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All DBs
Position
XI:18302655..18312796
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AA seq
603 aa
AA seq
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MNQKVRRILQTDSPETTEVRKHCESASTMDHQQQHAKVERFLKLGYTHSDILRVLESLHH
DAQTNDILEELIKTCHTRTYTNKSVPNSPKLVPRGCSPCPSQPRPGPERESAAGFRPVVI
DGSNVAMSHGDKKVFSCQGLQLAVNWFWDKGLRDITVFIPLWRKEQPRPEALITDQHILH
ELERRKILVYTPSRCVNGKRVVCYDDRYIVKLAFDSDGIIVSNDNYRDLQTENPQWKKFI
EERLLMYTFANDKFMPPDDPLGRNGPTIDDFLRKKPWTPDNKLQHCPYGKKCTYGVKCKF
YHPERANQSQLSVADELRALRDRAKNFSPKPSLQDTHSCPAVYQPEHGYTSSTPPPLSIE
DQSHRASPSEQLIYQRDSSSPRSHPNTSLHHCPSPDVDEAFSSMESSMSRLYIQDVPHSM
ERSPYSYSSGVASYSLSYDDYSHSGSFGCNTQRPCLSGGGYYAHHNGSVSCERPMCSQCR
CGQQQARMSPHHQPAWGSCPAMPPHNGEYPGHYSEKQYFRQPCNRQTHSLPKDPWGQGRL
SDGRMSGQTKSPSSEQRKGLRSQLSTLFPQSTVDQVMNAYPHVSDMSELITLIQSNRTSH
ISF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaaaggtgaggaggattctccagacagacagtcctgagacgacagaggtgagg
aaacattgtgaatcagcatccacgatggaccaccaacagcagcatgccaaagtggagcga
tttctcaagctgggctacactcacagtgacatcctaagggtgctggagagcctccaccac
gacgcccagaccaacgacatactggaggagctgataaaaacctgccacactcgcacttac
accaacaaaagcgtcccaaacagtcccaagctggtgcccagaggctgcagcccctgtccc
agtcaacccagacccggaccagagagagagtcagctgccggcttcagaccagtggttata
gatggaagcaacgtggccatgagccatggcgacaagaaagtgttttcgtgccaaggactg
cagttggccgtgaactggttctgggacaaaggcctgcgggacatcactgtgttcatccca
ctgtggaggaaggagcagccgcgacccgaagcactcattacagatcaacatattctccat
gagctggagaggaggaagatcctggtgtacacgccgtcccgctgcgtaaacggtaagagg
gtggtgtgctacgatgaccgctacatcgtcaagctggccttcgactcagacggcatcatt
gtgtccaacgacaactaccgcgacctgcagacggagaacccccagtggaagaagttcata
gaggagaggctgctgatgtacacctttgctaatgacaagttcatgcctccagacgatcct
ctggggagaaacggtcccaccattgatgatttcctgcgtaaaaagccgtggaccccggat
aacaagctgcagcactgtccctacggaaagaagtgcacttatggggtcaagtgcaagttc
taccacccagagcgggccaaccagtcacagctatctgtggccgatgaactgagagcgttg
agagacagagccaagaacttctctcctaaaccgagcctgcaggacacacacagctgcccc
gctgtgtatcagccagagcacggctacacgtcatccacccctccgcctctcagcatagag
gatcagtcccacagggcctcacccagcgagcagctcatctatcaaagagacagcagcagc
ccgagaagccaccccaacacaagcctccaccactgcccgagcccggacgtggacgaggcc
ttcagctccatggagagctccatgtccaggctctacatccaggatgtgccccacagcatg
gagcgctcaccctacagctacagcagcggcgtggccagctacagcctgagctacgacgac
tactcccactccgggtcattcggctgcaacactcagaggccgtgcctgagtggaggaggt
tactacgcacaccataacggttcagtgtcctgtgagcgccccatgtgcagccagtgcagg
tgcggtcagcagcaggccaggatgtcgccccaccaccaaccagcgtggggctcctgccca
gctatgccaccacataacggggagtatcctggccattattcagagaagcagtacttcaga
caaccctgcaacagacagacccacagcttaccgaaggacccgtgggggcagggccgtctt
tctgatggcaggatgagcggccagaccaagagcccgtccagcgagcagaggaagggcctg
aggagtcagctgagcaccctcttccctcagagcacggtggaccaagtcatgaatgcttac
ccacacgtctctgacatgtccgaactgattactctcatccagagcaacaggaccagccac
atctccttctag
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