Larimichthys crocea (large yellow croaker): 104918327
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Entry
104918327 CDS
T04659
Name
(RefSeq) calpain-2 catalytic subunit isoform X2
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
lco04210
Apoptosis
lco04217
Necroptosis
lco04218
Cellular senescence
lco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104918327
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104918327
04217 Necroptosis
104918327
04218 Cellular senescence
104918327
09144 Cellular community - eukaryotes
04510 Focal adhesion
104918327
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104918327
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
104918327
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C2: calpain family
104918327
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
CAPN13-like_C_EFh
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
104918327
NCBI-ProteinID:
XP_010728350
UniProt:
A0A6G0HMS5
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Position
III:complement(12104824..12113731)
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AA seq
699 aa
AA seq
DB search
MTSTAGRLAHQQKGEEGIGSNERAVKFSNQEYETLHQQCLMNGHLFEDNCFPAESKSLGY
NELGPYSSKTRGVVWKRPKELCSEPKFIDDGATRTDICQGALGDCWLLAAIASLTLDQRI
LARVVPQGQSFTENYAGIFHFQFWQFGEWVDVVVDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYAKVHGCYEALSGGSTIEGFEDFTGGISEVYVLDKAPPNLFQVMQKALHLGSLLGC
SIDITSSYETEAVTARKLVKGHAYSVTGATEVNFRGRLVQLVRIRNPWGQVEWTGPWSDG
SNEWDYVSDDEKSKLNHVAEDGEFWMSFSDFIRQFSRLEICNLTPDTLLSDDVGHWNSYQ
FEGMWRVGSTAGGCRNHAATFSSNPQFVVRLEDVDDDPMDGEDGCTFLVGLMQKGGRQKK
RLARDLETIGFAIYEVPDQYKGRSNVHLGPDVLLRQRAVAMSSNFINTREVCDRFRLPPG
EYAIIPSTFQPHKNGSFILRVFSEKQAATSPLEEDIDAQIEEEEVSESDVDPHFKHLFKQ
IAGDDMEVSVFELVRILNNVVSHRGDIKTNGFSLETGRQIVSLLDKDESAKLGLIEFHLL
WNKIQKYLEIFKHHDSDNSGTMSSHEMRGAATEAGFSVNSAVLQAVVSRYADAQYAIDFD
SFVGCLIKLESLFKIFKALERPDGKIALDMQQWLCLAIH
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacggcaggtcgactggcccatcagcagaagggtgaagaaggcattggcagc
aatgagcgtgcagtgaagttctcaaaccaggagtatgagactctgcatcaacagtgtctg
atgaatggacacctgtttgaggacaactgctttccagctgagagcaaatcactgggctac
aatgagctgggaccatactcatctaagacccggggtgttgtctggaaaagaccaaaggag
ctgtgctcagaaccaaagttcattgatgacggagcgacaaggacggacatttgccaagga
gctctaggtgactgctggctactggctgcaatagcctctctgactcttgatcagcggatc
ctggctcgtgtcgtgcctcaaggacagagtttcactgaaaattatgccgggatatttcac
ttccagttctggcagtttggtgagtgggtggacgtggtggtcgatgaccgtctacccacc
agagatggaaagctactgtttgttcactcagctgagggctctgagttttggagtgcactg
ctggagaaggcctatgcaaaggttcatggctgctatgaagccctttcaggtggaagcact
attgagggttttgaggatttcacaggaggaatctcagaagtatacgtcttagacaaggct
ccaccaaacctcttccaagtcatgcagaaggccctgcacctgggctcgctgctaggttgt
tctattgatatcaccagttcctatgagacagaggcagtgacagctcgcaaacttgtcaaa
ggacatgcatactcagtcactggtgcaacagaggttaattttcgaggcaggctcgttcag
ctggtccgcatcaggaacccatggggccaggtggagtggactggtccgtggagtgatgga
tccaatgaatgggactatgtcagtgatgatgaaaaatcaaagttgaaccatgtagctgaa
gatggagagttctggatgtccttttcagatttcatcaggcaattctccagactagagatc
tgcaacttaaccccagacacgctcttgagtgatgatgttggccactggaacagctaccag
tttgaaggcatgtggagggtcggctccacggcaggtggctgccgcaatcatgcagccaca
ttttcatccaaccctcagtttgtggtgcgtttggaagatgtggatgatgaccctatggat
ggggaagatgggtgcacctttctggtggggctgatgcaaaagggtggacggcagaagaag
aggcttgcccgtgaccttgagactattggttttgccatttatgaggttccagatcagtac
aaaggccgcagcaatgtccaccttggcccggatgtcctgctgcgacagagagctgtggcc
atgagcagcaacttcatcaacacacgggaggtgtgtgaccgcttcagacttcctccagga
gaatatgccattattccctcgaccttccagcctcacaagaatggcagcttcattctcagg
gtgttctcagagaaacaggctgcaacaagtccactggaggaggacattgatgctcaaata
gaggaggaggaggtatctgagagtgatgtggatcctcatttcaagcatctcttcaagcag
attgctggagatgacatggaggtgtcggtctttgaactggttagaattctgaacaatgtt
gtctctcaccggggtgatatcaaaaccaatggcttcagccttgagacaggtcgccagatt
gtcagtctgctggacaaagatgaaagtgccaagttaggactgatagaatttcacttgctt
tggaacaaaatccagaaatatctggagatcttcaaacatcatgactcagacaactctggc
accatgagctcccacgagatgagaggcgccgccaccgaagcaggtttcagcgtcaacagt
gctgttctgcaggccgttgtcagtcgttatgcggacgctcagtatgccatagactttgac
agttttgtaggctgtctcataaaactggaatcgctcttcaaaatatttaaggctttggaa
agacctgacggaaaaatcgcgctggatatgcaacagtggctgtgcctggcaatccactaa
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