Larimichthys crocea (large yellow croaker): 104918357
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Entry
104918357 CDS
T04659
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104918357 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104918357 (xpc)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104918357 (xpc)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
BUD22
NifQ
Motif
Other DBs
NCBI-GeneID:
104918357
NCBI-ProteinID:
XP_019126392
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Position
XV:complement(231193..241004)
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AA seq
960 aa
AA seq
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MAKRRECAETEADTKKAKQVLKAKSSGARATTARKKKDAGNDITEEEENLERKVKPKPRS
TTKRAASTTSTAVKTSKYFQSPVKEEETDSEDDFDMVTSPPRERKGKAAKKTEKEEKKEE
EEEDSEEDFDMLTSPPRTWKAKKTEQEEEEEEEEEEDSDEEEDDWEEVEELTGPLGPVEP
PDLVLPSQPVEIEIETPEVRKKKKKQAEFEMYLRRMMNRYKKDLLEDTHKVHLMCLIASG
MFRNRLCNEPDLLAITLSLLPTHFGSVAKERIDQNYLSGLLKWFRATFTLNPDLSYEERP
DLRALLERRLASLSARNHQEMTHLFLLVLRSLQLFCRLVLSLQPIPLKLPSAKGKTSAGG
PEKSSTSQGTSKNSPTEPKVSPGTKRTAGREKTRGDRGGKKAKRKEINEEEEEKAVTSVG
QRPKNSKRRSIASKVSYKEESNSEGEKEEEEGLSDEEEYQATSEEEDSAESDSGAKSTKM
KQKNKTKVSNSKSTAAPKRRSGGGKKQVKEEEEEGEEEEEENKGEGRLSNGTKRRSGKKK
EGPGADVWLEVYVEKTSSWICVDVEHGVGMPQLCSQNATAPVTYVISVDGNGFLKDLGRK
YDPTWMTSSRKRRVDEDWWEDTLEPFLGPDDDRDKQEDKELENKLLNKPLPVSVGEYKNH
PLYALKRHLLKYEAIYPPTATVLGYCRGEPVYSRDCVHTLHSKDTWLKEARTVRLGEEPY
KMVKGFSNRSRKARMVSEQKDQNDLPLFGEWQTEEYQPPLAVDGKIPRNDYGNVYLFKPC
MLPVGCVHLRLPNLHRVARKLDIDAAPAVTGFDFHGGYSHAVTDGYIVCEEHEEILRAAW
VEEQELQKQKEKEKREKRVTSNWALLVKGLLIREKLKQRYGKKSQGLAQEEETGGLSSDE
EAVEGGSPGAKTASETLAMSWPQNRQAEEDGGSVSGLKKKTTTKREKKGQEKHLFPFEKV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgaagagagtgtgcagagacagaggccgatacaaagaaagcgaagcaggtg
ctgaaggcgaagagcagcggagcaagagcaacaacagcgaggaagaagaaagatgccggt
aatgacattacagaggaagaggagaaccttgagaggaaggtcaaacccaaaccgcgttcc
accacaaaacgagcagcatccacaacctccactgctgttaaaaccagtaaatacttccag
tcaccggtgaaagaggaggagactgacagtgaggatgactttgacatggtgacctcacca
ccacgtgaacgtaaaggcaaggcggctaagaaaactgagaaagaagaaaaaaaagaggag
gaggaggaggacagtgaggaagactttgacatgttgacctcacctccacgtacatggaag
gctaagaaaacagagcaagaagaagaggaggaggaggaggaggaggaagacagtgatgaa
gaggaggatgattgggaagaagtggaagagctgactgggccactgggtccagttgaacca
ccagacctcgtcctgccatctcagcccgttgagatagagattgagactccagaagtcagg
aaaaagaaaaagaagcaggcagagtttgagatgtatctgaggcggatgatgaaccgatac
aagaaggatctgctggaagacacacacaaggtccacctcatgtgtctgatagccagcggg
atgttccgcaaccgtctgtgcaatgaaccagacctgctggccatcactctgtcactgctg
cccacccactttggctcggtcgctaaggaacgcatcgaccagaactacctctctggactg
ctcaaatggtttagagcaacgttcaccctcaatcctgatctttcctatgaggagcgtcca
gatctccgggctctgctggagaggcggctggccagcctatcagccagaaaccaccaagag
atgactcatctgttcctgctggtcctgaggtccctgcagctcttctgccgattggttctt
tctttgcagccgattcctctcaaactcccatcagccaagggcaaaacatctgctggtggc
ccagaaaagagcagcacaagccagggaacctccaagaacagccccactgagccgaaagtt
tctcctggtaccaagagaacagcaggaagggaaaagaccagaggagacagaggagggaag
aaagcaaagaggaaagaaatcaatgaggaggaagaggagaaggctgtaacgtccgtgggg
cagaggccaaagaactcgaagcgccgcagcattgcctcaaaagtcagctacaaggaggag
agcaacagcgagggggaaaaagaggaggaggagggactaagtgatgaagaggaatatcag
gcgaccagtgaggaggaggacagtgcagagtcagacagtggggctaaatctacaaagatg
aaacagaagaacaaaaccaaagtatccaacagcaagagtaccgcagctccaaagagaagg
agtggtggagggaaaaaacaggtaaaagaggaggaagaggagggggaggaagaggaggaa
gaaaataaaggagaaggaagactgagcaatggaacaaaacgaagaagtgggaaaaagaaa
gagggccctggagcggacgtgtggttggaggtgtatgtggaaaaaacttcctcctggatt
tgcgttgatgtggagcacggtgtcgggatgcctcagctctgctcccagaatgcaacagcg
cctgtgacgtatgtgatatcggtggacgggaacgggtttctcaaagacctgggaaggaag
tacgacccaacctggatgacatcatccaggaagaggcgggtggatgaagactggtgggag
gatacgcttgaaccgttcctgggacctgatgacgacagggacaaacaggaggacaaggag
ctcgagaacaagctgctgaacaaaccgctgccagtctcagtgggggagtataagaaccac
ccgctgtacgccttaaagagacacctgctgaaatatgaagctatctaccctccaacagcc
actgtactgggatactgcagaggagagccggtctactccagggattgtgtgcacaccctc
cactccaaagacacatggctgaaagaagcacgaactgtcagactaggagaggagccatac
aagatggtgaagggcttctctaatcgttcccgtaaggccaggatggtgtctgagcagaaa
gaccagaatgacctacctctgtttggagaatggcagactgaagagtaccagccgccttta
gctgtggatggaaagattccccgtaacgactacggtaatgtctacctgtttaagccctgt
atgttaccggtgggctgtgttcacctcaggctacccaacctgcaccgtgtagccagaaag
ctggacatcgatgctgctcctgcagtcaccggcttcgacttccacggaggatactcgcat
gctgtgactgacggttacattgtgtgtgaggagcacgaggagattcttcgagccgcctgg
gtggaagaacaagagcttcagaagcagaaggagaaagagaaaagagaaaagagggtgact
tccaactgggctctgctggtgaaggggctcctaatcagagaaaaacttaaacagcgctat
ggcaaaaagagccagggcctcgctcaagaagaggagactggtgggctttcgtctgatgag
gaggcggttgagggtggaagtcctggtgctaaaactgcgtctgaaactctagccatgtcc
tggccccagaacagacaagcagaggaggatggtgggagcgtcagtgggctgaagaagaag
acgacgacaaaacgggaaaagaaaggacaagagaaacatctgttcccctttgagaaagtg
tga
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