Larimichthys crocea (large yellow croaker): 104918361
Help
Entry
104918361 CDS
T04659
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104918361 (soga1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104918361 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Rsa3
TSC22
Motif
Other DBs
NCBI-GeneID:
104918361
NCBI-ProteinID:
XP_027144135
LinkDB
All DBs
Position
XV:680087..773452
Genome browser
AA seq
1917 aa
AA seq
DB search
MTKTKEVDVHNSPTHLFFASPKERRLHLRQKMESGGGTEGSDSGQAQHAVAGQQQQNPRP
ETAELSAALPAQTPGEKKKINRAPSPARPKDVPGWSLTKIRGGIGTPTLSVKPGAIHLGS
RISRRSPVGSLAAKDGKADKSGVGKPAGKSSFSAAALSKTSATKVAKSTGGRRKVSDASI
GSDDLSKDSGCATGKLSPTDSSSELSDCASEENKLSTDAVSSDAESRSSRGGGPDGDKPA
RDGALADRASQQATAKTTCSSAEKDYKDRLSVGVETGEGSISPGEERSVTSFDSRVPAST
SLAFSDLTEEFMDGMQEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYMEEDVYQLQ
ELRQQLEQANKTCRILQYRLRKAERRSLRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHS
QLDTVEKKRSRLEQENEELRVRLQDLEVAKQVLQQEIDKNSQKKRGARPNNKPDKKLGAQ
EDSSDLKCQLHFAKEESALMCKKLTKLVKDSEAMKEELAKYRSMYGDVNASLTVEEVADS
PHTREAEIRVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKGPQDGPQELTGVGGGL
GAGLGLGGGAMVLGGGASSENVMELQRHLQFVEEEAELLRRSLIEMEEQNKLLMNEINRY
KSELPPPTSTLSSNSLTSLTDGLLNDSPVHSIQEGAVLISTDAPTQEEELRLARLQIGEL
SGKVKKLQYENRVLLSNLQRCDLASYHAPSSSSSSLRLALETDAEAGDSAECLPTSPPHR
KEPVGGENDALEIKERKKKIEDNADAPTSLPGCLGQKDHDALLAMRDQARLVSTAIQLLT
SPESNCLSSSPSIYHKVCSNEAAEPCDLEKPQPHSQISELSDLADRPLVGALTSRLQALH
TQLQAFVEQVDNLGKPPAGGRDPQVEGASPLASPCTSLPCSGDGQDGVNTAEEKQPDYRD
PSEPEVKGQTEENSQSDINETQMQENNQLEQREKEADDALPAQSTDHQAQLSNAEESALG
PQEELEKERSAQRETTLKLTQLQGEHQKALLRRDFQLQSLGLQARLQQKLWSQERTLLVQ
ESQHLKQALLLLSLKLRCFLKQWRLGCKKDTEWKNILEMNSLKDLYLLLEEENLTSPAHQ
TDKRAAADEQPLSPTIKSSAVSSTLADLKVALQDLSGELRQERQGSQELTQQFAKAKASW
EVERTELKSLITQLETKTGKAAAAAALTTTDALEPPDLKVALKREREEHQHLLADSYAAV
MDLTKQLQIGERNWGREKMELLERFSQERAQWEQRLREVTAQQGKSKSLGGESSADTVVA
NGTGSPRTKSTPELDGPEVNGTANQEEKIQSAVPPLLICPELGDLSRKNWTYLTNETPDV
VDTCKTWDGPSGSCSSLVGSELDLESVQRSYTAPDRTGIRIYYSPPAVRRNQEGKELQQD
QNGSSSLGLSGSDVGMAAVETLEVQQPPSSFSSSYEQWLSSLSKQHRELLESRSGCITGS
IPSVVNNGFGGSANSLVDGMTPSSAFHSLEIGEISANLSDDMKEMTNCVRQAIRSSSLER
KSTKEPGSQVVGMSTRATQTASQYVSIGLQTDNLPGSRGAGLHSKAWSPRPSATTTSSLA
SARTRQISTSLDKVHSRIERPCCSPKYGSPKLQRRVSSGSTSRLDGSTSSRDRSLWSLQQ
RSISGGGGSAWARSTTTRDSPVLSGLTDGLSSLFSVVEHAGSTESLWRGDGGASQGASPA
RHPPAAGKPSGAAVCGSEPGTQRYGGLVQEFFRNVCSSRAQGGLTMPGERAQRDSLGVLG
SVDEPKPECVSAGIGGHGALAGLGGGNDNVTRIVNKRFMRQTAGEEMVSIMGGGKETISN
GGAAGSGTEDAPCDCAAQSSSFARPSRTATRHSLGQCKHRPHESPAATEEKGDACNE
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccataactctccgactcacctcttcttcgcctcg
cccaaggaacggagactccatctccggcagaagatggaaagcggaggcgggacggagggc
tcggacagcgggcaggcgcagcacgcggtggccgggcagcaacagcaaaacccccgaccc
gaaaccgcagagctctctgcggcgctgcccgctcagactccgggcgagaagaagaagata
aaccgggcaccgtccccggccagaccgaaggatgtacccgggtggtcgctcacgaagatc
cgcggagggattgggaccccgaccctgagcgtcaagccgggagcaattcacctgggcagc
cgcatttctaggcgcagccccgtggggagtcttgctgctaaagacgggaaagcagacaag
agcggtgttggcaaaccggccggtaaatcctccttctccgccgccgcgttgtccaagacc
tcagcgaccaaggtggccaagagcaccggagggcggaggaaggtgtcggacgccagcatc
ggatccgatgatttatccaaggattccggctgcgccaccgggaaactctctccgaccgac
agcagctccgagctatcggactgcgcctctgaggaaaacaagctctccacggacgccgtg
agcagcgacgcggagtcgaggagcagccggggcggagggccggacggggacaagccggcc
agggatggcgcgttggcggacagagctagccagcaagccaccgcaaagaccacctgctcc
tccgcggagaaggactacaaggaccggctctcagtgggcgtggagaccggggaagggagc
atatctcccggcgaggaacgctcggtcacctcgtttgacagcagagtgccagccagcaca
tccctggctttctcagacctcacagaggagtttatggacggcatgcaggaggagtttgtc
cgggagatagaagagctgagatctgagaatgattacctcaaagatgagatggaggagctg
aggtctgagatgctggagatgagggacatgtacatggaggaagatgtctaccagctgcag
gaactacggcaacagctggagcaggcaaacaagacctgccgcatcctgcagtaccgactg
aggaaagcagagcggcgttctctccgcgtagcccaaacgggacaggtggatggagaactg
atacgaacgctggagcaagacgtcaaagtggcgaaggatgtgtccatccgtctccacagc
cagctggacaccgtggaaaagaagaggagtcgtctggagcaggagaatgaggagctcagg
gtccgtctgcaggacctggaggtcgccaaacaggtcctgcagcaggagattgacaagaac
tcccaaaagaaacgaggagcacgacccaacaacaaacctgacaagaagcttggtgcacag
gaggacagttcagacctgaagtgtcagctccactttgccaaagaggaatcagccctgatg
tgcaagaagctgaccaagctggtgaaggacagcgaggccatgaaggaggagctggccaag
tacaggtcgatgtacggagacgtcaacgcctcgctcacagtggaggaggttgctgactca
ccccacacccgcgaggcagagatcagggtccacttgaagctggtggaggaggaggccaac
ctgctgagtcgacgcatcgtggagctggaggtggagaacaggggcctccgagctgagatg
gatgatatgaaaggaccacaagatggtcctcaagaacttactggtgttggtggtggtctg
ggggcgggtcttggtctagggggaggcgccatggtactcgggggaggagcttcatctgaa
aatgtcatggagctccagagacacctccagtttgtggaggaggaggcggagctactgagg
aggtctctaatcgagatggaggaacagaacaaactcctgatgaatgagatcaaccgatac
aaatctgaactcccgccaccgacgtccacgctgtcatccaactcattaacgtcgctgacc
gacgggctgctcaacgacagcccggtgcactccatacaggaaggggcggtgcttatcagc
acagatgccccgacccaggaggaggagctcagattggcgaggcttcagattggagaactg
agtgggaaggtgaagaagttgcagtacgagaaccgagtgctcttatccaacctgcagcgc
tgtgatctggcctcctaccatgctccttcctcctcttcctcctcactacgactggctctg
gagactgacgccgaggctggagactcagccgagtgtctccccaccagcccgccccaccgc
aaagagccagtcggaggtgagaacgacgccctggagatcaaagaacggaaaaagaagatc
gaggacaacgctgacgcaccaacctcactccctgggtgcctggggcagaaggaccatgat
gccttgctggccatgagggaccaggctcgcttggtttccacggcgatacagctcctgacc
tcccccgagtctaactgcctttcctcctccccttccatctatcacaaggtctgcagcaac
gaggcagcagagccatgtgacctggagaaacctcagcctcacagccagatatcagagctg
tctgacctggcggaccgccctctggttggtgctctgaccagcaggctacaggctcttcac
acccagctacaggcctttgtagagcaggtagacaacctgggtaaaccaccagcaggtggg
agggaccctcaggtggagggagcatctcccctggcctcaccctgcacctccctcccctgc
tctggagacggccaggatggagtgaacactgccgaggagaagcagcctgattatagggac
ccatcagaaccggaggtgaaaggtcaaactgaggagaacagccaatcagacatcaatgag
actcaaatgcaagaaaacaaccagctggaacagcgagagaaggaggcagatgatgcgctg
cccgcccagtccactgaccaccaggctcagctatccaatgcagaggagtctgctctcgga
cctcaggaggagctggagaaggagaggagtgctcagagagaaaccactcttaaactcaca
cagctccagggggagcaccagaaggctctgctccgccgggacttccagctgcagagtctg
ggcctccaggctcggcttcagcagaagctgtggagtcaggagaggactctgcttgtccag
gagtctcagcatctcaaacaggccctgttactgctcagcctcaaactgcgctgcttcctc
aaacagtggcggctcggctgcaagaaggacacggagtggaaaaacatcttggagatgaac
agcctgaaggacctctacttgctgttggaggaggagaacctgacgagccccgcccaccag
actgacaagagggctgctgcagatgaacagccgctcagccccactatcaagtctagcgcc
gtgagcagcaccttggcagacctgaaggtggcgctgcaggatctgagcggagagttgcgt
caggaaagacaaggctcccaggaactcacccagcagtttgcaaaggccaaggcatcatgg
gaagtagagaggaccgaactaaagagcctcatcacgcagcttgagaccaaaacaggcaaa
gcagcagcagcagcagctctgactaccactgatgcactggaacctccggacctgaaggtg
gcgctgaaaagggagcgtgaagaacaccagcacctcctggctgattcttatgcagctgtg
atggacctaactaaacagcttcagattggagagaggaactggggcagagagaagatggag
ctgctggagaggttcagccaagagagagctcagtgggagcagagactgagagaggtcact
gcacaacagggcaagtcgaagtcattaggtggcgagtcctctgcagacacagtcgttgct
aacggcacaggatcaccacgaacgaaatccacaccggagctggacggcccagaggtcaac
ggaacagccaatcaggaggagaagattcagtctgcagtcccgcctcttttgatttgccca
gagctgggcgaccttagcaggaagaactggacctacctgactaatgagaccccagacgtt
gtggacacttgtaaaacctgggatggtcccagcggctcctgcagcagcttagtgggatca
gagctcgatctggagtctgtccagaggagctacactgctccagatcgcactggcatccgg
atctactacagccctcccgctgtaagaaggaaccaggagggcaaagagctacagcaggac
cagaacgggagctcatccctgggactgagtggctcggatgtaggcatggctgcggtggaa
accctggaggttcagcagcctccatcctctttctcgtcctcttacgagcagtggctgagc
tcactgtccaagcagcacagggagctgctggagagcagaagtggctgtatcaccggttcg
atccccagtgtcgtcaacaacggatttggaggttcggctaacagtttggttgatgggatg
acgccctcgtcagctttccacagcctcgagatcggggagatttcagccaacttaagtgat
gacatgaaggagatgaccaactgtgtccgccaagccatacgctcttcatctctggagagg
aaatccaccaaggaacctgggagtcaggtggtcggcatgtccaccagggccacgcagact
gcttcacagtacgtcagcattgggcttcaaaccgacaaccttcccggcagcaggggggct
gggctacactccaaagcctggtctcctcgcccctcagcaacaaccacctcatctctagcg
tcggcccgaacccggcagatatcaacatcactggataaagttcatagccgcattgagagg
ccttgctgttcacccaagtatggatcaccgaaactacaacgcagagtctcttctggttcc
acctccagactggacgggtctacctcctccagggatcggagcctttggagtctccagcaa
agatccatcagtggaggaggaggctcggcttgggctcgctctaccaccaccagggacagc
cctgttctgagtggtctcaccgacggcctctccagcctcttcagcgttgtggaacacgct
ggaagcacagagtctctctggaggggtgacggaggagccagccagggtgccagtccagca
cggcaccctcctgctgcagggaaaccctctggtgcagcagtctgtggatctgagcccggc
actcagcggtatggaggcctggtccaggagttcttcaggaacgtctgcagcagccgtgcc
cagggaggactcaccatgcctggggagagagcccaaagagactccctcggtgtcttgggc
agcgtggatgagcccaagccagagtgcgtgtcagcagggattggaggacatggagcgctg
gctgggctgggtggaggcaacgacaatgtgaccaggattgtcaataagaggtttatgaga
cagacagccggggaggagatggtcagtatcatgggaggagggaaagaaaccataagcaac
ggaggagctgcaggatctgggactgaggatgcaccctgtgactgcgctgcccagtcttcc
tcctttgcccgaccatcgagaaccgcaactcgccattcgctcggccagtgcaagcaccgc
ccacacgagtctcctgcagcaaccgaggagaagggggacgcctgcaacgagtga
DBGET
integrated database retrieval system
