Larimichthys crocea (large yellow croaker): 104918406
Help
Entry
104918406 CDS
T04659
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lco03400
]
104918406 (ascc3)
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104918406 (ascc3)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104918406 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
AAA_19
IstB_IS21
YxiG
Motif
Other DBs
NCBI-GeneID:
104918406
NCBI-ProteinID:
XP_027141830
LinkDB
All DBs
Position
XIII:29220351..29363971
Genome browser
AA seq
2204 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDFTEQLYDLKTKRLKRRELFAKEGLTWQKIVRFCSEHQDK
AKQQAASHELKSLLLAAKQIVGAEHGQEAIESAAVFLFETFHNKDHVGTEDTRAIKQMFG
PFPSSGAEASCASVARMVSSLGESHVEDFIQTQSARHNPQRGSTFGCNIAFSYECYTLDP
LEDLPSSGVREEKVSLDFINFLNNQSGRKIAGEEEMSTSGRSLSSGDGTILRREVEKYLE
GGNMISSSPEELCTSLFEMLASRKSDDELQNELFELLGPEGLEMISTLLQQRAAIVDSLL
AMPPDRTGYLPDVGRKVSGEVAKPAYGCQVTIHSEQEKQMMKMYRREEKRERKRGKGTDD
GESSDAVMPFDPREMRAQREQALLNARREPVFSRERVYERVRYPNVYDSYAEATKSPAFV
GGARLLLPEGIRRENSKMYEEVEIPPNEPMPIGFEEKPVYISELDEIGQLVFKGMKRLNR
IQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKIVYVAP
MKALAAEMTNYFSKRLEPLGITVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVGD
VALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDVA
SFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKTTNKIQQLHDMEEVCYNKVLEQVKAGHQV
MVFVHARNATVRTAMGLIEMAKNHGEICFFQPDQGPDYGQCEKQIQRSRNKQMKEMFPEG
FGIHHAGMLRSDRSLMESMFSKGHLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGTL
VDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLDSLADNL
NAEVALGSVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPALELYRKELVVESG
RKLDKARMIRFEERTGYFASTDLGRTASHFYIRYNTIETFNENFNSQRTEADILSIVSKA
EEFEQLKVRDEELDELDQLLSNYCELPAAGGVENSYGKINILLQTYISRGEVDSFSLISD
LSYVAQNAARIVRALFEIALRKRWPTMTYRLLTLCKVIDKRLWGFAHPLRQFPNLSHIVL
NRLEEKNLTVDKLKEMRKDEIGHMLHHVNVGLSVKQCVHQIPSITMEATIQPITRTVLRV
RLLVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVTGEPQHIVFTIP
IFEPLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNREY
ESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPTSKVVYI
APLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRSW
QNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALANARD
LADWLGIGQVGLFNFRPSVRPVPLEVHISGFPGQHYCPRMASMNKPTFQAIRSHSPAKPV
LIFVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATVRDSNLKLTLAFGIGM
HHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKSRRYVDY
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLTVLSDHLNAE
IAAGTISSKQDAMDYITWTYFFRRLVMNPSYYNLEDISHESINKFLSNLVERSLRDLECS
YCIDIKEDDRTIEPLTYGRIASYYYLKHQTVRTFKERLKAELPIHELLSVLTDAEEYAEL
PVRHNEDQLNSQLAQQLPLQVNPHSYDSAHTKTHLLLQAHFSHAQLPCSDYTTDTKTVLD
NAIRVCQAMLDVAASEGWLVTAISICNLVQMIVQGRWLHDSSLQTLPHVEQQDLYLFRKW
AQRKGRSDAGGFSGPIEGLPELIAACNGKESVFAAIVGQEFQSSQIAQAWSFLSHLPVLE
VQISMKGWWEDSQEQTEHRLPAAGANLREERSWLDVHADQEYVLQVSLRRINTGQQRRKQ
DSKAQAPRFPKAKDEGWFLVMGEVDRRELLAVKRIGYVRNYTTVSVAFYTPEKTGKCIYT
LYLMSDSYLGLDQQYDIHLNVKPASIAAQVNTEVSDATSDLSLS
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccacggctgacaggtgcactgcgatccttctccaatgtcagcaagaaggag
gacttcaccgaacagctctatgatctgaagaccaaacgtctgaagaggcgggagctgttt
gccaaagagggcctgacatggcagaagattgtccgtttctgctccgagcatcaggacaaa
gctaagcagcaagctgccagtcatgagctgaagagcctccttctggccgctaaacagatt
gtgggggctgagcatggtcaggaggccattgaaagtgctgctgtctttctgtttgagacc
ttccacaacaaagaccatgtgggcacagaagacacccgggccattaagcagatgtttggc
ccctttccatcatctggagctgaagcttcatgtgcctccgtggctcggatggtgtcttca
ctcggagaatcccatgtcgaggactttatccagacacagagcgcccgtcataaccctcaa
cgaggctccacttttgggtgcaacattgccttctcatatgaatgctacacattggatcca
ctggaggatctgccttcctctggtgtccgtgaggagaaagtgagcctagactttataaac
ttcctcaacaaccagagcgggaggaagatcgccggtgaggaagagatgtctacctcagga
agatctctgagctctggggatggaactatactcagaagagaggtagagaaatatctggaa
ggaggcaacatgatctcatccagcccggaggagctgtgcacctccctctttgaaatgctg
gcctcccgcaagagcgacgatgagctgcagaatgagctgtttgagctgctgggcccagag
gggttggagatgatctccactctactccagcaaagggcggccattgtcgactccctcctc
gccatgccacctgacaggactggctacctaccagatgtgggtcgaaaagtcagtggcgag
gtggccaagcccgcctatggatgccaggtgacaatccattcagagcaggagaaacagatg
atgaagatgtaccgcagggaggagaagagagagaggaagagaggcaaaggaaccgatgat
ggcgagtcttcagacgccgtcatgcccttcgaccccagagagatgagagctcagagggag
caagccctgctgaatgcacgacgtgaacctgtgttcagcagagaaagagtgtatgaacgt
gtccgatatcccaatgtctatgacagctatgcagaggccacaaagtcccctgcatttgtt
ggaggagccagattgctgctacctgagggaatccgcagagaaaacagtaagatgtatgaa
gaggtggagatcccacccaatgaacccatgcctatcggctttgaagagaaacctgtctac
atctctgaactagatgagatcgggcagctggtttttaagggcatgaagcgtctgaacagg
atccagtccttggtgtttgagacggcctacaacaccaacgaaaaccttctcatctgtgct
ccaaccggcgccggcaagaccaacatcgccatgctgaccgtcctccatgagattcgccag
catctgcagcctggaggtgtcatcaagaaagatgaattcaagattgtatatgtggctcct
atgaaggccttggcagctgagatgactaattacttcagtaagcgattggagccattgggc
atcactgttaaggaactcactggagacatgcagctaaccaaaggagagatccttcgaaca
cagatgttggtgactactcccgagaagtgggacgtcgtgaccaggaagagtgtcggagac
gtggctctgtctcagattgtgcgtctcctgatcttggatgaagttcaccttctccatgaa
gaccgaggaccagtgctggagagcttggtggcgaggaccatcagacaggtggagtccacc
cagagcatgatcaggatcctgggactgtcagccaccctgcccaactatctggacgtggcc
agcttcttacacgtcaacccctatattggcctctttttctttgacagccgcttcagaccg
gtgccccttggacagacatttgttggcatcaaaaccaccaacaagatccagcagcttcat
gacatggaagaggtttgttacaacaaagtcctggagcaggttaaagccggtcatcaggtg
atggtgtttgtccatgctcgtaatgctacagtgaggacagccatggggctgatcgagatg
gcgaagaaccacggagaaatatgcttctttcaaccagaccaaggtccagactatggccag
tgtgagaagcagatccagcgctccagaaacaagcagatgaaggagatgttcccagaaggc
tttggaatccaccatgctggcatgttgcggtctgaccgcagcctgatggagagtatgttc
tccaaaggtcacctcaaggtgctggtctgtactgccacgctggcgtggggagtgaacctg
ccagctcatgctgtcatcatcaagggtactcaaatctacgatgctaagcgaggtactctg
gtggatctgggcatcctggacgtcatgcagattttcgggcgagcgggtcgtccccagttt
gacaagtacggcgagggcaccatcatcaccacccatgacaaactgagccactacctgacc
ctgctcacccagcagaatcccatcgagagccagttcttggacagcctggccgacaacctc
aacgctgaagttgctctggggtcagtcaccaacgtggaggaggcagtaaagtggctcagt
tacacttacctctatgtccgcatgagggccaacccgctggcatacggcatcaaccacaag
gcttatcagatggatcccgccttggagctgtacaggaaggagctggtggtggagtcgggc
agaaagctggataaggccaggatgatccgcttcgaggagcgcactggctactttgcgtcc
actgacctgggcaggaccgccagccacttctacatccgatacaataccatagagaccttc
aatgaaaacttcaactctcagcgaactgaagctgacatcctcagtattgtgtccaaggct
gaagagtttgaacagcttaaggtccgcgatgaggagctggatgaactcgatcagttgctg
agtaactactgtgagctgccggctgcaggcggagtggagaacagctacggcaagatcaac
atcctgctgcagacctacatcagccgaggagaggtggacagcttctccctgatctcagac
ctgtcgtacgtggcacagaatgctgctcggatcgtcagggctttatttgagatcgctctg
agaaagcggtggccgaccatgacatatcgccttctcaccctctgtaaggtgatagacaag
cggctgtggggctttgcccatcctctccgtcagttccccaacctgagccacatcgtactg
aaccgcctggaggagaagaatctaactgtggacaaactgaaggaaatgaggaaggatgag
atcggtcacatgctgcaccacgtcaacgtggggttatcagtcaaacagtgtgtccaccag
atcccttcgatcacgatggaggccaccatccagccaatcacacgcaccgtcctgcgcgtt
cgtctcctggtcacgcctgactttcgctggaacgatcaggtccacgggtcagtgggtgag
ccgtggtggttatgggtggaggatcctatcaatgatcacatctatcactccgagtacttc
ctcctgcagaagaaacaggtggtaacaggagagcctcagcacatagtgttcaccatcccc
atctttgagcccttgccttctcagtactacatcaaggcagtgtctgaccgctggctcggg
gctgaggccgtctgcatcattaacttccagaacctcatcttacccgagagacacccccca
cacactgagctgctggacctgcagccgttgccagtgacagctcttggtaatcgggagtac
gagagtctgtacaagttcactcacttcaaccccatccagactcagatcttccacacgctg
tatcacaccgacaccaacgtcctgctgggggccccgacaggctccggtaaaactattgca
gcggagatggccatgttccgggtcttcaacaagtatccgacctctaaggtggtgtacatc
gcccccctgaaagctctggtcagagagaggatcgaggactggaagatcagaattgaggag
aaactggggaagaaagtggtggaactgacaggtgatgtgactccagacatgagagctata
gctcaggctgacctcatcgtcaccacaccagagaaatgggatggagtgagcagaagctgg
cagaaccgaagttacgttcagaaagtcgccattctcatcattgatgagatccacctgctg
ggtgaggacagaggtcctgtgttggaggtcattgtgtccaggaccaacttcatctcatct
cacacgtctaagagcgtcagagtagtcggtctgtccacggctctggccaacgctcgagac
ctcgctgactggctgggaatcggacaggtgggtttgtttaacttccgtccgtctgttcgt
cctgtaccgctggaagttcacatcagtggctttccaggtcaacactactgcccccgcatg
gccagcatgaacaagcctaccttccaagcgatacgaagccactcgccagccaaacctgtg
ctcatttttgtgtcatcacgacgacaaacccgactgaccgccctggacctcatcgcctac
ctagccacagaggacaaccccaaacagtggctgcaccaggacgagagagagatagaggat
atcattgccacagtaagagattccaacctgaagcttacgctggcctttgggattggcatg
catcacgcaggcctgcatgagagagacaggaagactgtggaggagctgtttgtcaactgt
aagatccaggttttgattgccaccagtactctggcctggggcgtgaacttccctgctcac
cttgtggtcgtcaaaggaactgaatactatgatggcaaatccaggcgctatgtggactac
cccattacagatgttctgcagatgatggggcgagcaggtcgccctcagtttgatgaccag
ggtaaagcagttattctcgtccacgacatcaagaaggatttctacaagaagtttctctat
gaaccattccctgtggagtccagcctcctcactgtgctgtcagaccatctgaacgctgag
atcgctgcaggaaccatctcatccaaacaggatgcgatggactacatcacctggacgtac
ttcttcaggcgcctggtgatgaaccccagttattacaaccttgaagacataagccatgag
tccattaacaaattcctgtccaacctggtggagagaagcctgcgggacctggagtgctct
tactgcatcgacataaaggaggacgaccggactatcgagccactgacgtacggtcgcatc
gcctcctattactacctgaagcatcaaactgttcgcacgtttaaagaacgactgaaggcc
gagctgcccatccatgagctgctctctgttctgacagatgcagaggagtatgccgagctg
cccgtcagacacaacgaggaccagctgaacagccagctggctcagcagctccccctgcag
gtcaacccccactcctacgacagcgcccacaccaagactcacctgctgctgcaggcccac
ttcagccacgcccagctgccgtgcagtgactacaccaccgataccaagacggtgctggac
aacgccatccgagtctgtcaggcgatgctggatgtagctgccagtgaaggttggcttgtt
acagccatcagtatctgcaacctggtccagatgatcgtccagggccgctggctgcacgac
tcctcattacagacgctgccacatgtagaacaacaagacctctatctgttcaggaaatgg
gcgcagaggaaggggaggagcgacgcgggaggcttcagcggcccaattgaaggacttccc
gagctgatcgctgcgtgcaatggaaaggagagtgtctttgctgctattgtcgggcaagag
tttcaatcaagtcagatcgcccaggcgtggtccttcctgagtcatctcccggtgctggag
gttcagataagcatgaagggctggtgggaggacagtcaggagcagacagagcaccgcctt
cctgcagcaggagctaacctgagggaagagaggagctggctggacgtccacgctgaccag
gagtatgtcctgcaggtgtcactgagacgcatcaacacgggccagcagaggaggaagcag
gacagtaaggcccaggctcccaggttccccaaggcgaaggatgaaggctggttcctggtc
atgggggaggtggatcgcagggagctgctggctgtcaaacggattggatacgtacgcaac
tacacaactgtgtctgttgctttctacacaccggagaagactggaaagtgtatatacaca
ctgtacctgatgagcgacagctacctgggtctggaccagcagtacgacatccacctgaac
gtaaaacctgccagcatcgccgctcaggtcaacacggaggtgtccgacgcaacaagtgac
ctgtccctcagctga
DBGET
integrated database retrieval system
