Larimichthys crocea (large yellow croaker): 104918457
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Entry
104918457 CDS
T04659
Symbol
atf6
Name
(RefSeq) cyclic AMP-dependent transcription factor ATF-6 alpha
KO
K09054
cyclic AMP-dependent transcription factor ATF-6 alpha
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104918457 (atf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918457 (atf6)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
CREB
104918457 (atf6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
ZapB
bZIP_Maf
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
104918457
NCBI-ProteinID:
XP_010728529
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Position
XVII:complement(18407903..18438442)
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AA seq
645 aa
AA seq
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MASDLTLHFDNHRQFPAMDGETGVISIDQGGEWDISLFDELDNLGDADELLEALENNGFA
SEGPDLDFDIDIPLWNAVETSSIYTDGEVSVDSLSPAHTLSSVPSPSSVEALSPYSLQDE
ALSPQSQLSPVSVCSESSGISVISPPAKRAPKRTSQAARAKQAAPVKRPIQIGPKVSIQP
KPVITAVPLAHAAAPLQAKTIIIQPLQTTVLPMVKPAPVNIQPAPPPGHPIVLSQPSQVL
QIQAPQAVTSNVVSMATLRQDRPVPVAAPPVVSVTLLSPSSDDDSKMSQRQQRMIKNRES
ASLSRKKKKEYLLSLEARLKMALSENEALKCENGNLKKQLEGLLSENTGLNAKVPKRRAV
CLMVVLVFLMLNVGPMSLFQGGSKNDVYSPQHSGRHLLDFSSEAETEVVMDPEPVSSGPS
EIVDSSEDKALMVVKDPVFLRPPPPCQPPVNRTKCLELAHELRGWVHRHEVQQTKFRRMS
NSNHKPTRTILKTDNKEAESAQIVTVQYTETPEEKDPGSELQVYYAPHHTYGDFFDELNR
RGDTFYIVSFRRDHLLLPATNHNKGSRPKMSVVLPAININDSIIRDKEYEVMMQIDCEVT
DTRILHIRSSTIPPLLRVNRTDTFYQHSPTENQAAPPVGVLMGSA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacctaacgctacactttgacaatcatcgacagtttcctgcgatggacggc
gagacgggcgtcatctccatcgaccagggaggagagtgggacatcagcctgtttgatgag
ctggacaatctaggagatgcggatgagctactcgaggccctggagaataatggctttgcc
agtgagggtccggacctggactttgatatcgacataccgctgtggaacgcggtagaaacg
agcagcatctacacagatggcgaggtgagcgtggactctctgtcacctgcccacactctg
agctctgtcccctctccttcgtctgtggaagccctgtccccatattccttacaagatgaa
gccctgtccccacaatcgcagctctctcccgtttcagtctgttcagagtccagtggcatc
tccgtaatctctcctcctgctaagagagctccaaagaggaccagtcaggctgcacgagcc
aaacaagctgcgccagtcaagagaccgattcagattggcccgaaggtttccatccaaccc
aaaccggtgattacagctgtgcccttggctcatgcagcagctcccctgcaggccaaaaca
atcatcatccagcccctgcagaccactgtgctgcctatggtcaaaccagctccagtcaac
atccaaccagcgccccctccaggacatcccatagtgctgtctcagccaagccaggtgcta
cagatccaggcaccgcaggctgtcaccagcaatgtggtctccatggcaacgctcagacag
gacaggcccgtccccgttgctgctcctccggtggtctcagtcacactcctaagcccttcg
tcagacgatgattcaaagatgtcccagaggcaacagcgcatgataaagaaccgcgagtcg
gcatccctgtctcggaaaaagaagaaagagtatctgctctcactggaagctcgcctgaaa
atggcattgtctgagaatgaggcgctcaagtgtgagaatggcaacctcaagaaacagctg
gagggcctgctgagtgagaacacagggctgaatgcaaaggtccccaagaggagagccgtg
tgcctcatggtggtgttggtgttcctcatgcttaatgttggaccaatgagtctgtttcag
ggtggctccaagaatgacgtctattccccgcagcacagcggcagacacctgttggatttc
tcctctgaggcagaaactgaggtcgtgatggaccccgaacccgtcagcagtggcccctct
gagatcgtggacagctctgaggataaagcactgatggtggtgaaggatcccgtcttcctt
agaccacctcccccttgccagcctcctgttaacaggaccaagtgcttagagttggctcat
gagttgagaggttgggtccaccgtcatgaagtacagcagaccaaattcaggcgcatgagt
aacagcaatcacaaacccaccaggaccattctgaaaacagataataaggaggctgagagt
gcccagattgtgacagtacaatacacggaaactccagaggaaaaggatcctggcagcgaa
ctgcaggtatactacgcacctcaccatacctacggtgacttctttgatgagctcaatcgt
cgtggcgacactttctacatagtgtctttccgcagggatcatcttctacttcctgccacc
aaccacaacaaaggaagtcgacccaagatgtctgtggtgttgccagccatcaacataaat
gacagcatcataagggacaaagagtacgaggtgatgatgcagattgactgtgaagtaacc
gacaccaggatcctccacatcaggtcctccaccatcccacctttgctcagggtcaatcgc
acagacacgttttaccagcactctccgactgagaaccaggctgcacctcctgtcggtgtg
ctcatggggtctgcttaa
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