Larimichthys crocea (large yellow croaker): 104918458
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Entry
104918458 CDS
T04659
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X4
KO
K08526
retinoid X receptor gamma
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03320
PPAR signaling pathway
lco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
104918458
03320 PPAR signaling pathway
104918458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918458
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lco03310
]
104918458
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
104918458
Nuclear receptors [BR:
lco03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
104918458
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
104918458
NCBI-ProteinID:
XP_019135110
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Position
XVII:18445087..18470323
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AA seq
457 aa
AA seq
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MDSNDPYLHLNSTGPMSTAHTHPSHMGGMVGHSSVISTSRPLPSPMSSLVSPMNGLASPY
PVITSSLGSPSISLPSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGLQNLGNINYQCTS
PGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNR
CQYCRYQKCLAMGMKREGVCTAVQEERQRGKERGESEVESTSSFNEEMPVEKILDAELAV
EPKTETYSDGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKT
ELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLLRLPAL
RSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaatgatccatatttacacctcaattctacagggccaatgagcacagcccac
acacacccttctcacatgggtggcatggtcggccactcgtcagtcatcagcacctctagg
cccttaccgtccccgatgtcctccttggtttcgccgatgaacggactggcttcaccttac
cccgtcattacatcttctctgggttcgccctctatatctctgccgtccacacccaacatg
aactttggaccactcagcagtccacagatgaattctatgaacagtgttagcagctcagag
gacatcaagcctccacccggcctacagaacctgggaaacatcaactaccagtgtacgagt
cctgggggaatgtcaaagcacatctgctccatttgcggggaccgatcctcagggaagcac
tatggcgtgtacagctgcgaaggatgcaaaggcttcttcaagaggaccgtccgtaaagat
cttacctacacgtgtcgagacagcaaggagtgcctcattgacaaacgccagcgaaaccgc
tgccaatactgtcgctaccagaagtgcctggccatgggcatgaagagagaaggtgtgtgt
acagcggtgcaggaagagagacagcgtgggaaggagcgaggagaaagcgaggtggaatca
actagcagtttcaacgaggaaatgcctgtggaaaagatcctggatgctgagttagctgtg
gagcccaaaacagagacgtacagtgacggcagccccagcaactcaaccaatgaccctgtc
accaatatctgccaagcagcagacaagcagctcttcaccttggtcgagtgggccaaaagg
attccgcacttttccgaacttccgctcgacgaccaggtcatcctactacgagcaggctgg
aacgagctccttatcgcttcattctcgcatcgctcagtcacggtaaaagatggcatcctg
ttggcaacaggcctccacgtccacagaagcagcgcccacagtgctggagtgggctccatc
tttgatagagtcctgacagagctggtatccaaaatgaaagatatgcaaatggataagacg
gagcttggctgtctgcgagccatcgtcctcttcaacccagatgcaaaaggtctttcaaat
ccaccagaggttgagggcctgagggaaaaagtttacgcctcattggagtcgtacacgaaa
cagaaatacccagaccagcctggcaggtttgccaagctgctgctccgcctgcccgccctg
cgctccatcggcctcaagtgtctggagcatctgttcttcttcaagctgatcggagacacg
cctatcgacaccttcctgatggagatgctggaggcaccgcatcagatcacatga
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