Larimichthys crocea (large yellow croaker): 104918529
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Entry
104918529 CDS
T04659
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X2
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104918529 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104918529 (vps54)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104918529 (vps54)
Membrane trafficking [BR:
lco04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
104918529 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
zf-Tim10_DDP
Motif
Other DBs
NCBI-GeneID:
104918529
NCBI-ProteinID:
XP_010728613
LinkDB
All DBs
Position
X:29249082..29267927
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AA seq
986 aa
AA seq
DB search
MASSHSSSPVPRAGRDRIFLKERDPSPPRCRSIRSLPDVCPKEPTGGGRGLCDGPSVVAE
HDRWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREHFGPY
LQEMAQRERIHERCKTICPNKDDVDAVSSVTTNHDKSRAELEQVPKIFMKPEFALEDPAT
FNTVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQ
HELQDRLQETQQAVAVLRGRTADIDRVMCQGPLRALRTALTRNNCVKLHNKLKLMAAVHQ
TQPTVQLLLSTSEFVGALELISTTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMVEDF
SMYARSDLSRSLKDEPQVLEKERLESLVFGLLRQRKLDFLDIYSDEMIMAAKAIVTQCVA
ESVLHIEEIDTEVVTKLADQMRVMTFPQWFELLKNVFESFLLFLQRIKATLNVIKNVVLE
VLASNQRNRLLEEASSGASCQEASHSQSLLQGEAELAYLTHEGLFISDALNEAQQQQQQQ
QQQQQQQAGVQDQSSVVGSRTQQSRTEAGGSDSAFGTTETSVSREQSFMSAENMMPTDHE
LNRVINNIQELLHSASDISHDRCVKVLTARAKDGSLERLSSAEFVCLSQAVEGFVRDTEE
LCGRRSVSLRGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIADG
RISLPERKIPGPEERKPTEFLLVNGQKYAVVGTVLLLIRIFLEYCQCVNDIPSIATDMLT
RLSDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPIIRAHFETK
LQPKQFSVLRHFDHITKDYNDHIAEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVC
KQMSKMHEAIYELLPEEQTQMLFLRINASFKMHLKRQLARLGVVNDGGPQHGLVVVDVAF
YTENVQALKSLERLDLNMAEIWEQKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacagctcctctccagtgcctcgtgcaggccgagatcggatctttctg
aaggagcgggatccctccccccctcgttgccggtccatccggtccttgcccgacgtctgt
cctaaggagcccaccggcggggggcgaggtctgtgtgacggcccgtccgtggtggcagag
cacgacaggtggacggtgtacagctcgaaggtcaacctccccgctgcgctgaacgacccg
cggctcgcaaaaagggagtccgactttttcaccaaaacatggggcctggacttcgccgag
acggaggtgatgccctccttctacctccccaacatcaccagggaacacttcgggccctac
ctgcaggagatggctcagagggaaagaatccacgagcgctgcaagacgatctgtcccaac
aaagacgacgtggacgccgtctccagtgtcaccaccaaccacgacaaatccagagcggag
ctggaacaagtcccgaagatcttcatgaagcctgagtttgctctggaggacccggccact
ttcaacactgtcctgccctggtcgcacttcaacagtgccggaggaaagagcagcagagac
gtggcatcgtccaaactactgcaggagaagctaagtcactacctggatgtggtggaggtg
agcatcgcccggcagatctctctgcgctctgaggcgtttttccacgccatgtcctctcaa
cacgagctgcaggaccggctgcaggagacgcagcaggccgtggccgtcctgcggggccgg
acagccgacattgacagggtcatgtgtcagggacctctgcgggccctccgcaccgccctg
acccgcaacaactgtgtcaagctgcacaataagctaaagctgatggcggcggtgcatcag
acgcagcccaccgtgcagctgctgctctccacctccgagtttgttggagcgctggaactc
atctccaccaccaaggaggtgctgcagcaggagctccaaggaatccacagcttcagacat
ctgggctcccagctgtgtgagctggagaagctgatcgataaaatgatggtggaggatttc
agcatgtacgcccgcagcgacctgagccgcagcctgaaggacgagccccaagtcctggag
aaggagcgtctggagtctctggtgttcggcctgctgcggcagaggaaactggactttttg
gatatttacagcgatgagatgattatggctgctaaagccatcgtcactcagtgtgtagca
gaaagtgttttgcacatagaagaaattgacactgaagtcgtcactaagctagctgaccag
atgcgtgtgatgacgtttcctcagtggtttgagctgctgaaaaacgtctttgagagtttc
cttctcttcctgcagaggatcaaggccactctgaacgtgatcaaaaacgtggtcctggag
gttctggcctcaaaccagaggaaccggctcctggaggaggccagttcaggggcttcatgt
caggaggcttctcacagtcagtcgctcctgcagggggaggctgagttggcctacctcact
cacgaaggtctgttcatcagtgacgctctgaacgaggcccagcagcagcagcagcagcag
cagcagcagcagcagcagcaggcaggggtccaggatcagagctctgtggtgggctcccgg
acgcagcagagccggacggaggctggcggcagcgactctgcctttgggaccacagagacc
tccgtcagcagggagcagagcttcatgtccgctgagaacatgatgcccacagatcacgag
ctgaaccgtgtgatcaacaacatccaggagctgctgcactcggcctccgacatcagccat
gaccgctgcgtcaaagtcctcacagccagagccaaagacggctctctggagcgtctgagc
tcggcggagtttgtgtgtctctcccaggccgtggagggtttcgtcagggacacagaggag
ctgtgcggcaggcgcagcgtctccctgcggggagcgctgcagagccaggccaaccgcttc
gtccaccgcttccatgaagaacgcaagaccaaactcagcctcctcctggataatgagcgc
tggaagcaggccgaggttcccgctgagtttcaggatctggtgaactccattgctgacggc
agaatatcactaccagagcgcaaaatcccaggtccagaggaaaggaagcccactgagttt
ctgctcgtcaacgggcaaaaatacgccgttgttgggacggttctgctgctgatccggatc
tttctggaatactgtcagtgtgtcaacgacatcccatccatcgccaccgacatgctgacg
cgtctatcggacctcctcaagcacttcaactctcggagctgccagctggttctgggagcc
ggagctctgcaggtggtcggcctcaagaccatcaccaccaaaaacctcgcattagcttcc
cgctgcctgcagctggtggttcactacattcccatcatcagagctcattttgagaccaaa
ctgcagcccaaacagttcagcgtcctccgacacttcgaccacatcaccaaggactacaat
gatcacatagcagagatttctgctaagctggtggccatcatggacagtctgttcgagaag
gttttatcaaagtatgaagtgaaagctccgatgccttcggcctgcttcagaaacgtctgt
aagcagatgtcaaagatgcacgaagccatttatgagcttttacctgaagaacagacacag
atgttgtttctgaggattaatgccagttttaagatgcacctgaagaggcagctggctcga
ctcggggtcgtgaatgacggaggacctcagcacgggctggtggtggtggacgtcgcgttc
tacacggagaacgtccaggcgctgaaaagcctcgagcggctcgacctgaacatggccgag
atctgggagcagaagaggtga
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