Larimichthys crocea (large yellow croaker): 104918699
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Entry
104918699 CDS
T04659
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04120
Ubiquitin mediated proteolysis
lco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104918699 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104918699 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104918699 (mgrn1)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104918699 (mgrn1)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104918699 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
104918699
NCBI-ProteinID:
XP_010728831
UniProt:
A0A0F8CI83
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Position
XII:9221938..9229821
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AA seq
549 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTPVEEGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKIDF
CEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGLGGDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTMLSSSPAPTDATATEDVAESLSPDDEDR
MHVGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcaggatcgctggtgtggaggatatcgatatccaggccaac
tcggcctatcggtttccaccgaaatctgggaattattttgcgagccacttcttcatggga
ggagagaagtttgacacaccgcatcctgagggataccttttcggagaaaacatggacctg
aactttcttggaaataggccagtgcagtttccgtatgtgacacctgcaccgcacgagcct
gtgaaaaccctgaggagtctggtcaacatcaggaaggactccctgcgtttggtcaggtac
aaagatgactctgacactccggtggaggaaggtggaaagccaaaggttcagtatggtgtg
gagttcacctttgatgctgacgctcgggtggccatcaccctctactgccaagcatttgag
gagttctccaatgggatggcagtgtacagcccaaagaatccatcactggtctctgaaacg
gtgcattacaagcgaggggtgagccagcagttctccatgccatctttcaaaatagatttc
tgcgagtggaaagaggaagatctgaactttgaccttgacagaggagtgtttcctatggtc
atccaagctgtggttgatgaaggagacgattgcctcggacacgctcatgtacttttggca
gcctttgaaagacatgtggatggcagcttctccgtcaagcctctgaagcagaagcaaatt
gtggaccgtgtcagctacctcttgcaggagatctatggcattgagaacaaaaacaaccaa
gaaaccaagccatcggatgacgagaacagtgacaacagcaacgagtgtgttgtctgtctg
tcggacctgcgagatacactcatcctgccctgcagacatctgtgtctctgcaactcctgt
gcagacacgctgcgttaccaagccaacaactgtcccatctgcaggctgcccttcagagcc
ttgttgcagatcagagctgtgaggaaaaagcccggtgctctttcccccgtgtccttcagt
cctgttctggctcagacaatggaccatgacgagcactcgagcacagactcggttcctccc
ggctttgaacccatctcactgttggaggctctgaatggtctgcggtcagtgtctcccgcc
atcccgtctgcccccctctatgatgaaatcaacttctcaggaggtctaggaggtgacagc
agacagctgagctccccagagcatttaagtgacgggagtctgcaaaagggcaaagtcagc
aagtcacctgacagcacccttaggtctccatcttctcccatccaagaggaagatgaggag
aagctgtctgagatgtctgatgctcagccacacacaatgctgtccagcagccccgccccc
acagacgctactgcaactgaggatgtggcagaatctctgtccccagatgatgaggacagg
atgcatgttggaggagacatcctacaggactgcagcagtgaacacagcagtttgaccaaa
acagagagcgacccaccgggcgatttgtccctgccagggtcatcagagtcaacagaaagc
ctgaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacgagcagcctt
catatggaggatgagcacctcaacccctga
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