Larimichthys crocea (large yellow croaker): 104918839
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Entry
104918839 CDS
T04659
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918839 (srebf1)
04131 Membrane trafficking [BR:
lco04131
]
104918839 (srebf1)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
104918839 (srebf1)
Membrane trafficking [BR:
lco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104918839 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
104918839 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
104918839
NCBI-ProteinID:
XP_010729007
LinkDB
All DBs
Position
XII:complement(22441101..22454040)
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AA seq
1182 aa
AA seq
DB search
MNSLSFDDPSLDNLDPTLSLNDPSDIDTALLNDIDDMLQLIGNQDMEFGGLFDSPPYSVP
PPIQELPVLTQTITTAAPPTTPTPPPSTPSSSILSSSPHLDALLGPPINRRSSKTCLQPT
TFQQSPLAQVPSSTQRQQPASPQQQPQSLRQPQVEQPQPILSPTAPAQAASPHGSPGPSP
AFSSTPQALFTTPVPQTSPQPQTPLQVQTQPQQAPTTYSNSFTVGSPCSLSQPTTSLSSS
PPSVQPVTIQAHIQGLTSTSSLLATTASTTAQTITSHVQQVPVLLQPQFIKAESLLLTTL
KHDPCIVTTVSSPTTLATTTTPVQSTSLQAFMGGGTILTTVPVMVDTDKLPINRIAISGK
MAGQPPKGEKRTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKAIDYIRYLQ
QSNQKLKQENMALKMAAQKNKSLKDLVAMEVDGAADVKNELPTPPASDVGSPTSFSHCGS
DSEPDSPMVEEIKPNLGMPDRPAAGGSAGGMLDRSRMALCAFTFLFLSLNPLAALLCSSG
SSSAVNPAATAPHHAGRTIQGLDITVDSWGWMDWMLPTILVWLLNGVLVSGVLIRLLVYG
EPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLACAAL
WSLLRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSNRDAALVYHRLHQLHMTGKLNGS
HLSAVHMALSAVNLAECAGSCLPVASVAEVYVSAALRIKASLPRILHFTSRVFLSSARQA
CLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTVDPLAQVTQAFREH
LLEKALYCVAQPSGEKIPSQGEGEYADALEYLQLLISASDAAGATSQSFAIGSNMATVTG
CDPHSKWWSSVTVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKACLNTFRAVRA
LLSKPENCQLSLSYSDKASTLLRDSLNLGPHCHSSSLDKVVQLLLCDLLLVMRTNVWRLQ
QQQGAGPAGSGSTGASVPAGVHQASPPELQGFQQDLSSLRKLAHSFKPAMRRLFLHEATA
RLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYLPPSFLSAP
GQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctgtcgtttgacgatccttcgctggataacctggatcccacactgtcgctg
aatgaccccagcgatattgacacggccctcttgaacgacattgacgacatgttgcagctg
attggaaaccaggacatggagtttggaggactgtttgacagccctccatactcagtgccc
cctcccatccaagagcttcctgttttgacccagaccatcacaacagcagcccctccgacc
acccctaccccacctccgtctacaccctcctcttcaatcctaagcagtagcccccacctg
gatgcactcctgggccctcccatcaaccgtcgttcctccaagacctgcctacagcctaca
accttccagcagtcccccctggcccaggtgcccagctccacccaaaggcagcagccagcc
tccccgcagcagcagcctcagagcctcagacagccccaggtggagcaaccccaacccatc
ctcagtccaactgccccggcacaggcagcttccccccacggttcaccgggaccgagccca
gcttttagctcaacgccacaggccctctttaccacgcccgtaccccagacttcacctcaa
ccacagacaccacttcaggtccagacgcagcctcaacaggccccaaccacctacagcaac
agcttcacagtcggctctccttgcagtctgagccaacccaccaccagtttgtcatcctca
cctccaagtgtccagccagtgaccattcaggctcatatccaagggctgaccagcacgtcg
tctctcctggccacgacagcaagcacgacagcccaaaccatcacatcccacgtacagcaa
gtacccgttttgctgcagccccagttcatcaaggctgagtcactgctgctgaccactctg
aagcatgacccctgcattgttacgacagtgtcctctcccactaccctagccaccaccacc
accccagtacagagcacttcactgcaggcctttatgggcggtggcaccatcctgaccacg
gtgcccgtcatggtggatactgacaagctgccaatcaaccgcatcgccatcagcggcaag
atggccggccagccaccaaagggagagaagcgcacggcccacaacgccatcgagaagcgc
taccgctcctcgatcaatgacaaaatcatcgagctcaaagatctggtggccggcactgag
gccaagctcaacaaatctgcagtgctgaggaaagccatcgactacatccgttacctgcag
cagagcaaccagaaactcaaacaggagaacatggctcttaaaatggcggctcagaaaaac
aagtctctcaaagacctggttgccatggaggtggacggggcagctgatgtgaagaatgag
ctgcccacccctccggcctctgatgtcggctcccccacctctttctcgcactgtggcagc
gactcagagcccgacagtccgatggtggaagagatcaagccaaatttgggcatgccggac
aggccggcagcaggggggagcgccggtggcatgttggaccgttcccgcatggcgttgtgc
gccttcaccttcctcttcctctccctcaaccctctggctgccctgctctgctcatcaggc
agcagctcagcagtaaatcctgcagccactgccccccatcacgcaggaaggaccatccag
ggtctggatattacagtggactcgtggggctggatggactggatgctaccaactatactg
gtgtggcttctgaacggcgttctggtgtctggagttctgatccgtctgttggtgtatgga
gagcccgtaaccagaccacactctggatcttctgtcttgttctggaggcaccgcaagcag
gctgacctggacctagcgagaggagatttcgcccaggccagtcagaacctgtggacctgt
ctaaaggcccttggtcgtcccttgcccacctcacagttggacctggcctgcgctgcactc
tggtccctgttgcgattctgcctccagcgcctctgggttggccgatggctggccgcccgt
gctggaggcctgcgatctgaccgccccctgcaggaggatgcctgcaagagcaaccgtgac
gccgccctggtttaccaccgcctgcaccagctacacatgacaggtaagctgaatggtagc
cacctgtcagccgtgcacatggctctaagtgcagtgaacctggcagagtgtgctggctcc
tgcctgcccgtagcctctgtggccgaggtctacgtctccgcagctctacggatcaaagcc
agcctgccaaggatcctgcatttcacctctcgtgtgttcctgagcagtgcccgccaggca
tgcctgtcatccagtggcagtgtgcctccagctatgcagtggctctgtcacccgctaggt
caccgcttctttgtggacggggactgggctatccgcagcactcctaaagaaagcatctac
agccaggctggcaatactgtggatcctctggcccaggtgactcaggcgttcagagagcac
ctcctggagaaggctctgtactgcgtggctcaaccttctggagagaaaatccccagccag
ggcgagggggagtatgctgatgccctggagtaccttcagctgttgatcagtgcatcggat
gcagccggtgccacctcccagtcctttgcgatcggctccaacatggccacggtgaccggg
tgcgacccccattccaagtggtggtcctcggttaccgtggtgatcatcaactggctccag
ggagacgatgccgcggcggagaggctgtatccgaccgtcgagcacttgccgcgcagtctg
cagaacgcagagagtcttctgcccaaggcatgtctgaacacgttcagggcggtgcgggct
ctgctgtccaagccagaaaactgccagctgagtctgagctacagcgacaaggccagcacc
ctgctccgagacagcctcaacctaggaccacactgccacagctccagtttagacaaggtc
gtccagttgctcttgtgtgatctcctgttggtgatgaggaccaatgtgtggcgtctgcag
cagcagcagggggccggtcctgctgggtcggggtcgacaggcgccagcgtccccgcgggg
gtccaccaggcctcgccgccagagctccaaggcttccagcaagatctgagctccttacgc
aagctggcgcacagcttcaaacctgcaatgcgaagattgtttcttcacgaagctacagcc
aggctaatggcaggggccagtcccacccgcacacatcagctcctggatcgctcgctgcga
cgcagagcaacgcccggggccaagacagaggagtgcgagactcggccaggccagcgggag
caggcggaggccgtgatgctggcttgccgctaccttcccccctccttcctgtcagctccc
ggccaacgggtgggcatgctggcggacgcggcccgcaccctggagaagctgggagacaag
aggaccctccacgactgccagcaaatgatcatcaagctgggcagcggcacgactgtcacc
aacagctag
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