Larimichthys crocea (large yellow croaker): 104918868
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Entry
104918868 CDS
T04659
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104918868
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104918868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
104918868
NCBI-ProteinID:
XP_027141322
LinkDB
All DBs
Position
XII:22427673..22440756
Genome browser
AA seq
2329 aa
AA seq
DB search
MQETRGTTALTIIISLSLLLLPLHLPAFRTPNPPFPPFPSHLTSPSLLWLQTERVMQSFR
ERSGGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGPGHTRSGYE
AHSLANPTSMPPAGGPGSGGGPKDCYSQQAYPGYPGSGGGNGSGNGSSAPSQAKKTYRGS
KVPPPSAGQHLQGPGGYGNPMGSGNYSAQYMSEGHLQQKWEDPAQLAQYEQEMVGRMEAS
GTPAPGSSQYIDQNMLGHSQTQCHQPSTPAYTSPHHQPHPPNPAPSPLMYPQSHLHYPQH
SPSPSPYMEKCSPMPHCYKGYNMPPNSQYGRQMSSHSSLKPGGYRPTQNSYGYQQPPSRG
YEQQPPLQALTNPQEPHPKYQHYNQPQQNYCLSELSVRSPEQYYQTCSPSSSHSPARSVG
RSPSYSSTPSPLMTNPESFQYGQPPMTPGTASSSSSSSAGMQEQASTNTMLMPPRSHPSP
NVPHAAPHSYTTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEALV
ANKKGSKRNSGGSNSSAGSGASSKKGEEYKSPPYPDGGGGSSVGGGPMQDPYSTPQHQPM
PMELHEGGYSSSSDEQLERGYYYCSQGRSPAQAPSNTQLSLDTASSCSMTSPDDMSTRSG
DSGLHNLTPDPTRCQSGQGRDDISTPVKSIGDERSPTSITIPSPMKQERDSPSDIQHINE
PVKENFEESAWTEKSADKEEVTEKKPDCERDSDITTENLEKWSDEEKCPALYNKVNKGVT
EKSYCYKETEYQEVQSKYDPDARDSVEQSPAALSDSSHKEHFGQEMKREAFKSESPTASE
SSVKTLPFISRVDLEQDQYSTEKEDSSENTSPTPQVEVLDESNSDKRESRDEEDEEEGEG
EEEADDEEEDEIQKQTQHTLSPPLSAEIREELGEGEKVSQSSTEEHMNNRDGPEKPPGDL
CSRTESQSTEHHTDNESAGAPVHPNAAAATAAPDVSTRESAIGDTAPQPQSAMPVFSALN
DKATPPASGSRDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDMEPGIS
CASAMTPLAKPEPVAPSAQPRAFGRKHARGRRRIMHSGVGIRRQLSLEQDGEKEEEGAHL
PTQKPCMPPSKTVIFSDQMDLAHRESIVSQTPKMLNDGFRSRMCTRSFNAPDLPPKIEPH
VKRKPGPKPGSKPGLKPGPKPGPKPGTKPGAKPGPKPGPKPGIKPGPKPGPKAGPKPGPK
PVLHEPELTQKIEPPVKRKPGPKPGSKPGPKPGTKPGPKPGTKPTLKPGPKPGPKPGPKP
ADTPDTVPIKAPVGRPKGSVSKAKLVQQEETIQPLIGLQSRGRKSLKATISQENQDVKPI
NQEEKQTNHEAKAPEKEGKNMVLRSRKPSQEKLSKEKEKIIEEDILPQTLTEIEASEVSP
NVLESVTVEQTLTPIPNAVKNTDVPVDPPAPLASPIPTEQSEEKTSLSLKRKPSPELSTM
PVKKKRGPKPKPKPLPPQPPILEQVVSTPKEKAVRGPKRKRGPPKKVSVVTPLSKDTPPS
ISETDITDVPVVPPQCPTKTKVLPPRKGRGQKYEAMVQKITSPSSKKHIPIPQIDSNLTD
DVTTKVLSQHVLKEGETSMLVNSTEMIEGEVKSIECRQEGVKQQRKEEVTQERGKQVKVN
QEVPTPEEVRQGVEEEVVKKKETRQESIKQGTQQDVGSDKVWSSIEAPLEVRAPGKWAQP
ASEGVSFVVTKSARTKRKRWAMVESTDASVVALEAGSLIVTTPRLAKQRAIKNNHEMHLK
QRRKKRKGQAPLVEAETVEETNIETAEQQQERVEEKVTPTESTVPLPISPDEITEAPQLT
STELIQKSRRGRKPSANPTKRKRGKASSEQIPGKPMKVHKKPGPKPGMKDAIEVIEAVVR
AAGCEQDETEERQKDEMERREGEKTEDQETCIVGPVVTISEKQTETISVKRFRRKTVHQN
SKLSFCPYVRINNSRDFSSWCAIVNKPEDAVIFQRRRKKGILRMRNPFTVAKVVPHTAAM
LQGPLVNRNLSESRCLTCSLCGKPANYRDLGDLCGPYYTEDGIPRKILTIRHRESLREES
QKTTDDNSSSSEEPGSSSKDEVEGSTEKEGKTETCTQEGSSSRHHHWHYRRTERTERIGQ
EGGPRRLTLRERFRRMKQLQAISTGASSNQEGSDSTFQRLQVEAEAKEHWAHENCAIWTK
GVIMVAGRLYGLKEAANNSAQTSCYKCQIVGASLSCCWRGCSHKYHYVCAKEIGCTFHED
DFSIKCPKHESLLPLSTGPVRYSTSSTTSQQVKHHLSSKANENAVLTAT
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaacccgaggcacaactgcactaaccatcataatttctctctctcttctcttg
cttcccctccatctccctgccttcagaacccctaacccccccttcccccctttcccgtct
cacctcacctccccctccctgctctggctacagacggagagagttatgcagtccttccgt
gagcggagcggtggttaccacagcaaccaaccctgctaccagcaggaaccccatgaatta
tcccgcctggagacctaccggcaacacccgcatcatccccacccccagcacccacaccca
ggacccggtccacatccaggccctgggccaggcccggggcacaccaggtcaggctatgaa
gctcactcactggcaaaccccacgagcatgcctccagcgggaggaccaggaagcggagga
ggacccaaggactgttacagccagcaagcctaccctggatacccaggcagtggtggaggg
aatggaagtggaaatggaagctcagcaccctcacaggcaaaaaaaacctacagaggaagc
aaagtgcccccaccgagcgccggtcagcacctacagggtcctggaggctatggtaacccc
atgggttctgggaattactcagcccagtatatgagtgagggccacctccagcagaaatgg
gaggaccctgcccagttagcacagtatgagcaggagatggtgggacgtatggaggctagt
ggtacccctgcacctggctcgtcccaatacatagaccaaaacatgttgggccactcccag
acgcaatgccaccaaccatccacccctgcctataccagtccccaccaccaacctcaccct
cctaaccctgccccgtcccctctcatgtacccccagagtcacctgcactacccccagcac
tcaccctctccatcgccatacatggaaaaatgcagccctatgccccactgttataaaggg
tacaatatgccccccaattcccagtatggcaggcaaatgagcagccacagcagtttgaag
ccggggggttacagaccaacccagaacagttatggctaccagcagcctccctccagaggt
tatgagcagcagccccctttacaggccctgaccaacccccaggagccccatcctaaatac
caacactacaaccaacctcaacaaaactactgtctctcagagctgtctgtcagatcacca
gaacagtattatcagacttgtagtccctcctcaagccactcccctgcgcgttctgtagga
cgctccccctcgtacagctccaccccttcaccactaatgaccaacccagagtcattccaa
tatggtcaacctcccatgacccccgggacagcctcctcttcttcatcctcttcagctggt
atgcaggagcaagccagtaccaacaccatgttaatgcccccacgctcacatccctcaccc
aatgtgccacatgcagcccctcacagctatactaccacaccgcaggtccccaccatgaaa
gaacgcttctcagagaagttgttgtccaaccccagcttgtggagcctgaatgccctcacc
tctcaggtagagaacatctctaataatgtccagcagctgctgctttcagaggccctggtg
gctaataagaaaggcagtaagcgcaacagtggagggagcaacagcagtgctggaagtgga
gcatcctccaaaaagggtgaagagtacaaaagtcctccatacccagatggtggtggtggt
agtagcgttggtggaggtcccatgcaggacccttactctaccccacagcaccagccaatg
cctatggaactccacgagggaggctactccagcagtagtgatgaacaactggagaggggt
tactactactgtagccagggcagaagtcctgcacaggcccccagtaacacacaactcagc
ctggatacagcctcttcatgctccatgacatctccagatgatatgtccaccagatctggg
gactcaggtttgcacaaccttactcctgaccctactagatgtcagtcagggcagggaaga
gatgacataagtactccagtgaagagcattggtgacgagaggtctcccacaagtattaca
atccccagtcctatgaaacaagaaagggactctccttcagatatacagcatatcaatgag
cctgtcaaagaaaactttgaagaatcagcctggacagagaaatcagctgacaaagaggag
gtgacagaaaaaaaacctgactgtgagagagattcagatataacaacagagaatctggaa
aaatggtcagatgaagagaaatgcccagctctctacaacaaagtaaacaaaggggtgaca
gaaaaaagctattgctataaggagacagagtaccaagaggtccagagcaaatatgaccct
gacgcaagagactcagtcgaacagtccccagctgccctctctgactccagccacaaggag
cactttggccaagagatgaaaagagaggcattcaaatccgagtctccaactgcttccgag
agctcggtgaaaacattgcctttcatttctagggttgaccttgaacaggatcaatattcc
actgagaaggaagacagctcagagaacacctctccaaccccccaagttgaggtcttggac
gagagcaactcagacaagagagagagcagagatgaggaggatgaagaggagggggaagga
gaagaggaggcagatgacgaagaagaagatgaaatacagaaacaaacacaacatactctc
tcgcctcctctgtctgcagagattagggaggaactgggggaaggggaaaaagtgagtcag
tcatcgactgaggagcacatgaataatagagacgggccagagaagcctcctggagatctc
tgcagcaggacagagagtcagagtactgagcatcacactgacaatgagtctgcaggggcg
cctgtccatccaaatgcagcagcagcaacagcagcaccagacgtttctacaagagaatca
gccattggtgacactgctcctcagcctcagtctgctatgccagtcttctcagctctcaat
gataaggcaacacctccagcttcaggctccagagatcatattgatcacagtgatgctaaa
gtgctggagccagactctcctcagcttccagggaagtcaatacttccctcagccccctcc
tgggcagacacaccaccctctccaaaaaaaggtgatgaggacatggagccaggcatcagc
tgtgctagtgccatgacccccttggccaaaccagagcctgtggccccatctgctcagcca
agggcattcggacgtaagcacgcaaggggcagaagaagaataatgcattcaggtgtagga
atcaggcgacagttaagcttggagcaggatggtgaaaaggaagaagaaggagctcacttg
cctacacagaaaccctgcatgccccctagcaaaactgtgatattctcagatcaaatggat
ctagctcatcgggaatctattgtgagccagactcctaaaatgctaaatgatggtttccgt
tcgagaatgtgcactcgttcatttaatgcaccagatttgccacccaaaattgagcctcat
gtgaagagaaaaccaggcccaaaaccaggttcgaagcctgggctcaaaccagggccaaaa
ccaggaccaaaaccagggacaaaaccaggagcaaagccaggtccgaaaccaggtcctaaa
ccaggcataaagcccggaccaaagcctgggccaaaagctggaccaaaaccaggaccaaaa
cctgtgctacatgaaccagagctgacacagaaaattgagcctcctgtgaagcgtaaacca
ggacccaaaccaggttcaaaacctgggccaaaacctgggacaaaacctggaccaaaacct
gggacaaaaccaactctaaaacctggtccaaaaccaggacctaagcctggacccaagcct
gcagatacacctgacactgtacctatcaaggccccagtgggtcgccccaaaggctctgtt
tctaaagcaaagctggtacaacaagaggaaaccatccagcctctgataggattacaaagc
aggggcaggaaaagcctaaaagctacaatatcacaagaaaaccaggatgtaaaaccaatc
aaccaggaagaaaaacaaacaaaccatgaggccaaagcaccagaaaaggagggtaagaac
atggttttgagatccagaaagccctcacaagaaaaactgtcaaaggaaaaagaaaaaatc
atagaggaagatattctaccacagacactaacagaaattgaagccagtgaggtttctcct
aatgtactggagtctgttacagtggaacaaactctaactccaattcctaatgcagtcaaa
aacacagatgttccagtagacccacctgcaccacttgcttcaccaatcccaactgaacaa
tctgaagaaaagacatcactttcactaaaacgaaaacctagcccagagctctcaacaatg
ccagtaaagaaaaagaggggtccaaagcccaaaccaaagcccctaccaccccaaccccca
atactggaacaggttgtgtctacacctaaagagaaagctgtccggggcccaaaaagaaag
cgagggccacccaagaaagtctctgtggtcactccactatccaaagacacccctcccagc
attagtgaaactgacatcactgatgtccctgtggtgcctcctcagtgcccaactaaaaca
aaagttctcccaccacgcaaaggcagaggacagaaatatgaggccatggtgcagaaaatt
acatctcctagctcaaagaagcacatcccaattccccagatagatagcaatctaactgat
gatgtgacaaccaaggttttgtctcaacatgtcttaaaggaaggtgagacatctatgctc
gtaaacagcactgagatgatagagggagaggtgaaaagcatagagtgtcgacaagaagga
gtgaaacaacagagaaaagaggaggtgacacaagaaagaggaaagcaggttaaggttaat
caagaggtaccaacgccagaagaggtgagacaaggagtggaggaagaggtagtaaaaaag
aaggaaacaagacaagaaagcattaaacaagggacacaacaggatgttggatctgacaag
gtttggagctcaatagaggccccattagaagtcagggctccaggaaagtgggcacaacca
gcctcagaaggtgtatcttttgttgtcactaagtctgccagaactaaaagaaagagatgg
gccatggtggagagtacagatgcctcagtagttgccttggaagcagggagcctaatagtt
acaactccaaggctagccaaacagagggccattaaaaacaaccatgaaatgcacctaaag
cagagaaggaagaagagaaaaggccaagccccactggtagaagcagagacagttgaggag
acaaatattgaaactgcagaacaacagcaggagagggtagaggagaaagtgacccccaca
gagtccacagtacctctgccaatcagtccagatgagatcacagaagccccccagcttacc
agcacagaactcatccagaaatctaggagaggcagaaaaccatcagcaaatccaaccaaa
aggaaacgaggcaaagcctcatcagagcagattcctggcaagccgatgaaggtccacaaa
aagcctgggccaaaacctgggatgaaggatgccattgaagttattgaagctgtagtaagg
gctgcaggatgtgaacaggatgaaacagaggaaagacagaaagatgaaatggaaagaagg
gaaggagaaaagacagaagatcaggagacatgtattgtgggtcctgtagtgacaatatca
gaaaaacagactgaaaccatttctgtgaaaagattcaggcgcaagacagtccatcaaaac
tctaaactgtctttctgtccttatgtgcggattaacaactccagagacttttcttcttgg
tgtgccatagtcaacaagcctgaggatgcagttatatttcagagacgtagaaaaaagggc
atactcagaatgaggaatcccttcacagttgcaaaggtagtaccacacactgctgccatg
ctacagggacctttggtaaatagaaatctaagtgaatctaggtgtcttacatgtagcctt
tgtggaaagccagcaaattacagagacctaggtgacctgtgtggaccgtattacacagag
gatggtattccacggaagattttgacgatcaggcacagagaatccctcagggaagagtca
cagaagaccaccgacgacaacagtagcagcagtgaagaaccaggcagctcctcaaaggat
gaggttgagggcagcacagaaaaggagggcaaaacagaaacatgcactcaagagggcagt
agtagcaggcaccatcactggcactaccgacggacagaaagaacagaaagaataggtcag
gagggtggtccacgaagattaactctccgagagaggttcaggagaatgaagcagctccaa
gccatcagcacaggggcctccagcaaccaagagggcagtgacagcacgttccaaaggcta
caagtggaggcagaagctaaggagcactgggcacatgaaaactgtgccatctggaccaag
ggggtaattatggtagctgggaggctatacggactgaaagaggctgccaacaactcagcc
caaacgagctgctacaagtgccagattgtgggggcgtccctcagctgctgttggagaggc
tgctctcataaataccactatgtctgcgccaaagagataggctgcacattccacgaggat
gacttctccatcaaatgtcctaaacatgagtctctcctccctctttctacaggacctgta
agatattccacctccagcaccacatctcagcaagttaagcatcacctatccagcaaggca
aatgaaaatgctgtcctgacagccacctag
DBGET
integrated database retrieval system
