Larimichthys crocea (large yellow croaker): 104918902
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Entry
104918902 CDS
T04659
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104918902 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104918902 (gspt1)
03012 Translation factors [BR:
lco03012
]
104918902 (gspt1)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104918902 (gspt1)
Translation factors [BR:
lco03012
]
Eukaryotic type
Release factors
104918902 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104918902
NCBI-ProteinID:
XP_010729084
UniProt:
A0A6G0HZI1
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Position
XVI:complement(11807843..11817572)
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AA seq
585 aa
AA seq
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MDPRDTAPDSWELEEDAEAPAAAAGLPTAFAALNVNAKPFVPNVNAPVFVPSFLQASAVE
MPPPEGAPDPVACMEVAETVAPVENGGTEADMTTEEETWEQKEEPGGGGGGGGEEHLGSG
GACQEGAARKEDEEMMEEEEEEMPMPKVVPATPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLINKMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKDPVP
ECPWYTGLPFIAHLDSLPNFTRSNDGPVRLPIVDKYKDMGTVILGKLESGCISKAQQLIM
MPNRHTVEVLSLLSDDVETDDAAPGENLKLRLKGIEEEEILPGFILCSPDNLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCI
ARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgccgcggcggggctcccgacagccttcgccgcccttaatgtcaacgccaagccgttt
gtcccaaacgtcaacgccccggtgtttgtaccgagcttccttcaagccagcgccgtggaa
atgcctccacccgagggtgcccctgatccagttgcctgcatggaggtggcagaaacagtc
gctcctgtggagaatggaggcacagaggcagacatgaccacagaggaagagacgtgggag
cagaaggaggagccggggggaggtggaggaggcggaggagaggagcacctgggttcagga
ggagcctgtcaggagggcgccgcgaggaaagaggatgaggagatgatggaggaggaagag
gaggagatgccgatgcccaaagtggttcctgcaactccggacgcgcccaagaaagaacac
gtgaacgtggtctttatcggtcacgtggacgctggtaaatcaactattggaggacagatc
atgtacttaactggaatggtggacaagcgaaccctggagaaatacgaaagagaagcgaaa
gaaaagaacagggagacatggtacctgtcgtgggctctggacacaaaccaggaggagagg
gacaaagggaagacagtcgaggtcgggagggcttactttgagactgagaaaaaacacttc
actatcctggacgcccccggacacaagagctttgtccccaacatgattggtggagcgtca
caagccgacctggcagtcctggtgatttcagcgagaaagggggagtttgagaccggcttt
gagaagggtggacagacacgcgaacatgccatgctggctaaaacagcaggagtcaagcat
cttattgttctgatcaataagatggatgaccccactgtcaactggagcctagagagatat
gaagagtgtaaggagaagctggtgccgtttctaaaaaaggtgggcttcaaccccaaaaag
gacatccactttatgccttgctctggactcacaggtgccaatctcaaggaccccgtgcct
gaatgcccctggtacacgggtttgccatttattgcccatctggacagtttgccaaacttc
accagatccaacgatggaccagtcagactacctattgtagacaagtacaaggacatgggt
acagtcatcctcgggaagctggagtctggatgcatcagcaaagcccagcagctgatcatg
atgccaaacaggcacacggtggaggtcttgagcctgttgagcgacgatgtggagacagac
gacgcggctcctggggagaacctgaagttgaggcttaaaggcatcgaggaagaagagatc
ctccctgggtttatcctctgtagccctgacaacctctgccactctggccgcaccttcgac
gcacagatcgtcatcattgagcacaaatcaatcatctgtcctggttacaatgcggtcctt
cacatccacacctgcattgaagaagtgcaaatcacagccttaatctgtctggtggacaag
aagtcgggcgagaagagcaaaacccgaccacgctttgttaagcaggaccaggtgtgcatc
gccaggctccgggcagcaggagtgatctgtttagagaccttcaaagacttccctcagatg
ggacgattcacactgagagacgaaggcaaaactatcgccatcggcaaagtgctgaagctg
gtgccagaaaaggactaa
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