Larimichthys crocea (large yellow croaker): 104919052
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Entry
104919052 CDS
T04659
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104919052 (smarcal1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104919052 (smarcal1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DUF7480
ERCC3_RAD25_C
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
104919052
NCBI-ProteinID:
XP_010729269
LinkDB
All DBs
Position
XVIII:11296475..11310080
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AA seq
911 aa
AA seq
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MSNQLTAEQQRKIEENRRKALERRAQRLAQSSSSSTSVQVQPPKHNANPDTATLTHHRDI
PTSAPVPKRFAPPFKKDSQSLHNQNQDPNQERLFGCKVNQSTLCNSAASRPIQIIDPLPQ
TRNQPVSSPVLSSFGVKPAHPKPDLTSTSSSTSSSSSSSSSSGGAVGSFYKQNTKPVAQL
PSNSSTLNAVPAKKPAISARGKCVAHAEGRFRVEVGYHVELIAVFKSIPSKSYDPATKMW
NFSLEDYRQLMEQAAGIASVSLRPLEGMDAIDVAAATSAARDGVALGALLKLCNGWQKPG
AVLQGQCVLVSQTKFEVDVGYHVDVIAAFKQMPTKNYDMKTRKWSFSLEDYKRLMDLLSG
IAAVEVEPLPRAIIQAFSARFDGTEARSLDVPEADLSSIDHSLTRSLMPFQREGVNFAVS
KQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWAEAFRRWLPSLSPDSI
NVVVKAKDNLRSGLVNVVSYDLLSRMDKQQSGKPFSVLIMDESHFLKNMKTARCKAALPL
LKAAKRVILLSGTPAMSRPSELYTQILAVKPTLFPRFHEFGMRYCDAKQLTWGWDYSGSS
NLGELKLLLEECLMLRRLKSDVLSQLPAKQRKVVTITIDGVNTRTKAALSAAAKQLAKGK
SNKKEEKEALLVFYNHTAEAKLQAIMEYITDMLEGGREKFLVFAHHKLVLDHIITELGKK
NVTFIRIDGATPSAERQLLCDKFQYSTQTCVAVLSITAANMGLTLHSADLVVFAELFWNP
GVLIQAEDRVHRIGQTSNVNIHYLVAKGTADDHLWPMIQEKMNVLEQVGLSESNLSDNAL
NASFHSKDPKQRSIMEMFQRSFTEDDDIDEAILLEAADDWEDTPPENRSAEHHGMVRQSP
SKKSIKDFFGR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcagctgaccgcggagcaacagcgaaagattgaggagaacagacggaaagct
ttggagagaagagcccaaagacttgcacagagcagcagcagcagtacttcagtgcaggta
cagccccctaaacacaatgcaaacccagacactgccaccctcactcatcacagagacata
cccacctccgctcctgtgcctaaaaggtttgctccacccttcaagaaagactcacagagc
ctccacaaccaaaaccaagaccccaatcaggagcgcttatttggctgcaaagtcaaccag
agcactctgtgtaactctgctgcttcgagaccgatacaaatcattgacccccttcctcaa
acgagaaatcaaccagtgagcagccctgtcttgtccagctttggcgtgaagccggctcat
cccaaaccagacctcacctccacctccagctccacctccagctccagctccagctccagc
agctctggcggcgcagttggctcgttctacaagcaaaatactaaacctgtggcacagctt
ccctcaaactcatcaacgttgaatgctgtacctgcaaaaaagcctgccatctctgcaaga
gggaaatgtgtagctcacgcagagggccgctttagagtagaagtgggctaccatgtggag
cttattgcagtttttaaatccatcccctcaaagagctatgaccctgccacaaagatgtgg
aacttcagtctggaggactatcgacagctaatggagcaagcagctggtattgcctctgtg
tctttgaggcctctggagggaatggacgcgatagacgtcgcagcagccaccagtgcagcc
cgtgacggcgtggcactgggggcgctgctgaagctttgtaatggctggcaaaaacctgga
gccgttctccagggccagtgcgtcctggtgtctcagacaaagtttgaggtcgacgtcggt
taccatgtcgatgtcattgcagctttcaagcagatgccgacaaagaattatgacatgaaa
acaagaaagtggagcttttcacttgaggattacaagagactcatggatctcctcagtggg
atagcagcagtggaggtggagcctctgcccagggcaataatccaggctttctctgccagg
tttgacgggaccgaagccaggtctttagacgtccctgaggcagacctctccagcatcgac
cactcgctcacccgcagcctcatgcccttccagagggaaggagtcaattttgcagtgtct
aaacaaggccgcctcctcctagctgatgacatgggcctgggaaagacggtgcaggccatc
tgcatagcagcctattacaggaatgaatggcccttgctggtggtcgctccctcctctgtg
cgattcacctgggctgaggccttcagacgctggctcccctccctgagtcctgacagcatc
aacgtggtggtgaaagccaaagacaacctgcggtctggtttggtcaacgtcgtcagctac
gacctcctgagcaggatggacaagcagcagtcaggaaaacccttcagtgttctcatcatg
gatgagtctcactttttgaagaacatgaagactgcgcgttgtaaagcagcgttgcctctg
ctgaaggcagcgaagagagtgattcttctatctgggacccctgccatgtccagaccctct
gagctctacacccagattctggctgtcaaacccacactcttccctcgcttccatgagttt
gggatgcgctactgcgatgccaaacagttgacttggggttgggactactcaggctcatct
aacctcggggagctgaagctgttgctggaggagtgtctgatgttgcgccgcctcaagtcc
gacgtcctctcccagctccctgcgaaacaacgcaaggttgtcacaataaccatagatggc
gtcaacacccgcacaaaagctgctctgtcagctgcagccaagcagctagccaaaggaaag
agcaataaaaaggaagagaaggaagccctcctcgttttttataaccacacagcagaagcc
aagctgcaagccattatggagtacatcacagacatgctggagggcgggagggagaagttt
ctagtgttcgcccatcacaagttagtcctggatcacatcatcaccgaactgggaaaaaag
aatgttactttcatccgtattgacggagccactccatcagctgaacgacagctgctgtgt
gacaagttccagtactcgacccagacctgtgtggctgtactgtctatcactgcagctaat
atgggtctcaccttacactctgctgacctggtggtgtttgctgaacttttttggaacccc
ggggttctcattcaggcagaggacagggtgcaccgtattggacaaaccagtaatgtgaac
attcactacctggttgccaagggaactgctgatgatcacctgtggccaatgattcaggag
aaaatgaacgtcttggagcaagtgggtctgtctgagtcaaacctctcagacaatgccctg
aacgccagcttccattctaaggaccctaagcagaggagcatcatggagatgttccagagg
tctttcactgaggatgacgacatagatgaagccattttactggaggctgcagatgactgg
gaggacaccccgcctgaaaaccgctctgctgaacaccacggcatggtcagacaaagcccc
agcaaaaagagcatcaaagacttttttggcagatga
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