Larimichthys crocea (large yellow croaker): 104919094
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Entry
104919094 CDS
T04659
Symbol
clock
Name
(RefSeq) circadian locomoter output cycles protein kaput isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104919094 (clock)
03036 Chromosome and associated proteins [BR:
lco03036
]
104919094 (clock)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104919094 (clock)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104919094 (clock)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104919094 (clock)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_NPAS4
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
104919094
NCBI-ProteinID:
XP_027145892
LinkDB
All DBs
Position
XVII:12313148..12339357
Genome browser
AA seq
906 aa
AA seq
DB search
MTSSIDRDDSSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMD
KSTILQKSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYASESVTSLLEHLPSDLVDQNLLNFLPMGEHSDVYKALSSHIMEGETLTPEYLKTKN
QLEFCCHMLRGTIDPKEPPVYEYVKFIGNFKSLNNVPNCTRNGFEGVIQRSLHSAFEDRV
CLIATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEESQPEITADKQSQDSGSESQLNTSSLKEALERFNHSR
TPSASSRSSRKSSHTAVSDPASSQMKLQGDRSTPGRQSVSAVEMTSQRRSSISSQQSMSS
QNTGQNMASSMVSQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQVQTSQSMVQFCSQLE
AMQNLKEQLEQRTRMIEANIQRQQDELRQIQEELQRVQGQSLQMFLQKGAAGLNLSSVQM
AQGNAVQQGGTLSMQGQVVSAGPLQNSIQQQHAVQPQSQQQTLLREQSTALSQSQRSSLT
LQPQQNQLPASLYNTMMIPQQSPSNVVQITTSLAQNTGPNTPAVATFAQDRAAQIRFPAG
PQLLTKLVTGQMACGAVMVPTTMFMGQVVTAFAPQQGQTQTISISQQPQQQQQQQQQQQQ
QQQQQQQQQQQEQQVQQQSQVTAMQPGQAPLAQQQTQFLQAPRLLHGNQSTQLILQAAFP
LQQQGSFTATTQQQQQLQQQQQQLQHQQQHQQQQQQQQQKQLQQQKQQLGPHRADSLSDR
SASQPQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagcattgaccgggatgacagcagtatctttgatgggttaatggaagaagat
gaaaaggacaaagcaaaacgtgtgtcccgtaacaagtccgagaagaaacgcagagaccag
ttcaatgtcctcatcaaggagctgggtaccatgttgccgggcaacacccggaagatggac
aagtccactattttgcagaagagcatcgactttctgcacaaacacaaagaaatcgctgct
cagtcagagtcgactgagatcagacaagactggaagcctccttttcttagtaatgaagag
ttcactcagctgatgttggaggcattagatggattcttccttgcaattatgactgatggg
aatataatctacgcctctgagagtgtgacgtccctactagagcacttaccttctgatctc
gtggatcagaacctgttgaacttcctgcccatgggggagcattcagacgtgtacaaagct
ctgtcctctcacatcatggaaggagagacgctgacgcctgaatatctgaaaacaaaaaat
cagctcgagttctgttgccacatgctccgagggacgatcgaccccaaagagccgcctgtg
tacgaatatgtcaagttcattggaaacttcaaatccctgaataatgtgcctaactgtacc
cgtaacggcttcgaaggagtgatccagcgatcgcttcactctgcctttgaagacagagtg
tgtctcatagcaactgtgaggcttgccaaaccgcagtttatcaaggagatgtgcactgta
gaggagcctaatgaggaattcacctccagacatagtttagagtggaagtttctcttcttg
gaccacagagctccacctataataggttacctcccttttgaggtcctgggtacatcagga
tatgactactaccatgtagatgacctggagacgctggccaaatgccacgaacacttaatg
caatacggcaagggaaagtcatgctactacagattcctcaccaaagggcagcagtggatt
tggcttcagacccactactacatcacctaccaccagtggaactccagaccagagtttatc
gtctgcacacacactgtagtaagttacgctgaagtaagagcagaacagcgcagagagctc
ggaattgaagaatcacaacctgagatcacagcagacaagcagtcccaggattcaggctcc
gagtcccagctcaacacgtccagcctgaaggaagctctggaacgcttcaaccacagccgg
acaccgtccgcctcgtcccgcagctcacgcaaatcctcgcacaccgccgtgtctgacccg
gcctcgtcacagatgaagcttcagggtgacaggagtacgccgggacgccagtctgtctct
gctgtggagatgacgtcccaacggaggtcatctatcagcagtcagcagtcgatgagctcc
caaaatacaggacagaacatggcatcatccatggtttcacaacaacaacaacagcagcag
cagcaacaacaacagcagcagcaacaacagcagcaacagcagcaacaacaacagcagcag
cctcaacagcaacaagttcagaccagccagtcaatggtgcagttctgcagccagctagaa
gccatgcagaacctgaaagagcagctggagcagaggacgaggatgatcgaggccaacatt
cagcggcagcaggatgagctgcgtcagatccaggaggagctgcagagagttcagggacag
agcctgcagatgttcttgcagaaaggagccgcgggactgaatctgagctctgttcagatg
gcccaggggaacgctgtgcagcaagggggaacactcagcatgcagggccaggtggtgtct
gcagggcctctgcagaacagcatacagcaacagcacgctgtccagccccagtcccagcaa
caaacactcctacgggaacagagcacagcgctctcacagtctcagcggtcgtctctcact
ctgcagcctcaacaaaatcaactgcctgcgtctctgtacaacacaatgatgatccctcag
caaagcccctctaacgtggtccagatcaccactagcttggctcagaacaccggacccaac
actcctgctgtggctacatttgctcaggaccgtgcagctcagattaggtttcctgctggt
cctcagctgctcaccaagctagtgacggggcagatggcgtgtggggcagtcatggttccc
acaaccatgttcatgggccaagtggtaacagcctttgctcctcagcaaggccagacccaa
accatcagcatttcccagcagccgcagcaacagcagcagcaacaacagcagcagcagcag
caacagcagcagcagcagcagcagcagcagcaggagcagcaggtacagcagcagtcacag
gtcacagccatgcagcccgggcaggctccactggcccagcagcaaacacagttcttacag
gctcctcgacttctgcacggaaaccagtccacccagctgatcctgcaggcagcgttccct
ttgcagcagcagggttccttcactgccaccacccaacagcagcagcagttacaacaacag
caacagcagttacaacatcaacaacaacatcaacaacaacaacagcaacagcagcagaag
cagttgcagcagcagaaacagcagctgggccctcacagggcggacagtttgtccgatcgc
tctgcctcgcagccacagtag
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integrated database retrieval system
