Larimichthys crocea (large yellow croaker): 104919151
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Entry
104919151 CDS
T04659
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X2
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104919151 (sox6)
Transcription factors [BR:
lco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104919151 (sox6)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104919151
NCBI-ProteinID:
XP_010729387
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Position
VIII:11970957..12105152
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AA seq
780 aa
AA seq
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MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEESAEAHGTPQLPLHSL
LHGKSHPDEMQPLSSVPPESDWDSLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDDSSCMEKLLSKDWKEKME
RLNTSELLAEVKGTPESLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQ
QGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPP
LPQPLNTSGPISPSSLKNDKSSSSPITHVKEEGTQPLNLSARPKTTELVKSPTSPTQNLF
LGSKSSPNSLLSKGGIPSPLGGGLGRGSSLDILSSLNSTALFGDQDTVMKAIQEARKMRE
QIQREQLQHHQQGMEAKLSALTSVGLNNCRIDKERAHFESIGHHLGKLGEEGKIGHRVID
LTRPEDLDGGAGSTEARVFREARGRNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNS
NISKILGSRWKSMSNQDKQPYYEEQARLSKLHLEKYPNYKYKPRPKRTCIIDGKKLRIGE
YKQMMRSRRQEMRQFFTVGQPPQIPITTSASMVYPGAITMATTTPSPQMTSECSSASASP
EPSIPVIQSTYNMKLEPSTMANNSEPVNGEDEMDMYEDFEDEPKSDYSSENDTQEPVSAN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtcatgtcttccaagcaagcc
acgtctccttttgcctctgtggttgatggggatgatgccatgagtcaggagcacttgtct
tgggagaaagaggagagcgctgaggcgcatggcacaccacagctacccctgcacagtctg
ctccatggaaaatcccatcctgatgaaatgcagccgcttagcagtgtaccgccagagagc
gactgggacagcctggtgtcagcccaacagcgcatggaatctgacagcaataaagtatgt
tccctgtactccttccggaacaattccacttccccacacaagccggaggagggggcccgg
gagcgaagtgacctgctgagcggatcagcgtttggaactccggagcgccgcaaaggaagc
ctggcagacgtagtggacacgctgaagcagaagaagctggaggagatgacaaagacagag
caagacgactcctcatgcatggagaaacttctttccaaagactggaaagagaagatggag
aggcttaacaccagtgaactgcttgcagaagtcaaaggtactccagagagcctggcagaa
aaggaacaccagctctccacaatgatcacccagctgatcagcctgcgagagcagcttctg
gctgcccacgacgaacagaagaagctcgccgcctcacagatggagaaacagaggcagcaa
atggagttagctcgtcagcagcaggagcagattgcaagacaacagcagcagcttctacag
cagcagcacaaaatcaacctcctccagcaacagatccaggtccagggtcacatgcctccg
ctcatgatccccatttttccacacgaccaacgcactctggcagcagcagccgccgcccag
caaggctttctcttccctccgggaatgtcttataagccaggtgataactacccggtgcag
ttcattccatccacaatggcagctgcagcagcgtcaggactcagccccctccagcttcag
caactgtatgccgcccagcttgccagcatgcaggtctctcctggagccaagatgcctcca
ctcccccagcccctcaatactagtgggcccatctctccctcctctctgaagaatgacaag
agttcctccagccccatcactcacgtcaaggaggagggaacacagccgctcaacctgtct
gctcggccaaagacgacagaactggtcaaatcccccacatctccgacacaaaacctgttc
ctcggcagtaaaagcagccccaacagtctcctcagcaagggtggtatccccagccctctt
ggaggaggcttgggccgtggctcgtctctggatattctgtccagcttaaactctaccgcg
ttgttcggggaccaggacacagtgatgaaggccatccaggaggctcggaagatgagggag
cagatccagagagaacagctgcaacatcaccagcagggcatggaggcgaagctgtctgcc
ctcacttcagtgggcctcaacaactgcagaattgacaaggagagggcgcattttgagagc
atcgggcaccacctcggcaagcttggtgaggaaggaaagatcggccacagagttattgac
ctcaccaggccagaggatcttgatggaggtgctggatctaccgaagcgcgagtcttcagg
gaagctcgaggaaggaacaacaacgagccccacattaaaaggccaatgaatgccttcatg
gtgtgggctaaagatgaacgccgcaagatcctccaggcgttccccgacatgcacaactcc
aacataagcaagattttgggttctcggtggaagtccatgtctaaccaggacaagcagcca
tactatgaggagcaagcccgtctgagtaagctccacctagagaagtacccaaactacaag
tacaagccacgacctaagaggacctgcattattgacggaaaaaaactccgcattggagag
tacaagcagatgatgcgttcacggcgacaagagatgaggcagttcttcactgtgggacag
ccaccacagatccctatcacaaccagcgccagtatggtctatcctggggccatcaccatg
gcgaccaccacaccctcacctcaaatgacgtcagagtgctcgagtgcctcagcgagtcct
gagccatccattcctgtcatccagagcacctacaacatgaagctagagcccagcaccatg
gcaaacaacagcgagccggtcaatggcgaggatgagatggacatgtacgaggattttgag
gacgagcccaaatcagactatagtagtgaaaatgacacacaagagccagtcagcgccaac
tga
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