Larimichthys crocea (large yellow croaker): 104919182
Help
Entry
104919182 CDS
T04659
Name
(RefSeq) calpain-5 isoform X2
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104919182
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C2: calpain family
104919182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
104919182
NCBI-ProteinID:
XP_010729423
LinkDB
All DBs
Position
III:complement(40273419..40325520)
Genome browser
AA seq
642 aa
AA seq
DB search
MFTSVKAFEGQQYSTLKRQCLQSGLLFEDPRFPATDDSLFYQGNRIGRVVWKRPRELCED
PHLFVDGISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDTEKPDSYAGI
FHFRFWRFGEWVDVVIDDRLPTVDNQLVYCHSNDSNEFWSAMVEKAYAKVYGCYEALDGG
NTADALVDFTGGVSEPVDLLEGQMATDEVARNQLFERVLKVHNRDGLISCSIRATTVEDM
EARLDCGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLHMIRMRNPWGEKEWSGPWSDSSE
EWNKVSKSEREKLGVTVQDDGEFWMTFDDFCQYFTDLILCRLINTSYLSIHKTWEEEVMR
GSWIHRQDPLRNRSGGCINHKATFLQNPQYVFDVKKVEDEVLICLQQKEKRATPKEGKGE
NLAIGFDIHRVELNRKYRMHSAQQKVAGSIYINSRCVFLRKELKEGRYVIIPTTFDPGQQ
GDFLLRVFTDVPSDCKELTLDEPPQTCWTGMCGYPQLVTQVHVLNAEGLQGQDSNGAVDP
YVIITCEGERVRSPVQKDTRCPNFDIKGLFYRKKPKDGIHIEIYNKNMIVDTFLGQVIMF
SDPNERQEQHTLHLRDKGNRQDNDLPGTLTVRLITSTTLTNI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcagtgaaggccttcgaggggcagcagtactccaccctgaagaggcagtgt
ttgcagagtggcctactctttgaggacccccgcttccccgccaccgacgactcactcttt
taccagggcaacaggatcggacgtgttgtctggaagaggcctcgggagctgtgtgaagac
cctcacctgtttgtagatggcatcagcgcacacgatttacatcagggacagctgggtaac
tgctggttcgttgctgcatgctccagcttggcctccagagagtcactatggcaaaaagtc
attcccgactggaaggagcaggagtgggatacagagaagccagactcctatgccgggatt
ttccactttcgtttctggcgttttggtgagtgggtggacgtggtgattgacgaccgatta
ccgacggtggacaaccagctggtctactgccactccaacgacagcaacgagttctggagt
gccatggtggagaaggcctacgccaaggtttatggctgctatgaggctttggatggggga
aacacggccgacgcactggtggatttcacaggtggtgtttcagaaccggtggacctgttg
gagggtcagatggcaacagacgaggtagcccgtaaccagctgtttgaaagagttctcaag
gtccacaacagagacggtcttatcagctgctccatcagggcaaccacagtagaagacatg
gaggcgcggttggactgcggtctggtcaaaggccatgcctacgctgtgactgacgtacgg
aaagtgcggctaggtcacggactgctggccttcttcaaatcggagaagttgcacatgatc
cgcatgaggaatccctggggagagaaggagtggagtggcccctggagtgacagttcagag
gagtggaacaaggtcagcaagagcgagagagaaaaactcggtgtcactgtgcaggacgac
ggcgagttctggatgacatttgacgacttctgccagtacttcacagacctaattctgtgc
cgcctcatcaacacctcctacctgagcatccacaaaacctgggaggaggaggtgatgagg
ggctcctggatccaccgccaggacccccttcgcaaccggtccggaggctgcatcaatcac
aaggccaccttcctgcagaaccctcagtacgtgtttgatgtgaagaaggtggaggatgag
gtgctgatctgcttacagcaaaaagagaagagagccacacccaaagagggcaaaggggaa
aaccttgccataggttttgatattcaccgggtggagctaaatcggaagtaccgtatgcac
tcagcccagcagaaagtagctggctccatctacatcaactcgcgttgcgtcttcctcagg
aaggagctaaaagagggccgttacgtcatcattcccacaacctttgaccccgggcagcag
ggcgacttcctgctccgtgtcttcactgatgtgccttcagactgcaaagagttgactctg
gatgagcctcctcagacatgttggacggggatgtgtggctaccctcagctggtcactcag
gtccatgtactgaatgctgagggtctgcagggacaggactccaatggagctgtagatccc
tacgtgatcatcacctgtgaaggagagagggttcgttcaccagtccaaaaggacacacgt
tgcccaaactttgacatcaaaggcctgttctaccgcaagaaacccaaggacggcatccac
atcgagatctacaacaagaacatgatcgtggacaccttcctgggtcaggtgatcatgttc
agcgaccccaatgagcggcaggagcagcacacgcttcacctccgtgacaagggcaaccgc
caggacaacgacctcccgggcacgctcactgtgcgcctcatcacctcgaccacgctcacc
aacatctga
DBGET
integrated database retrieval system
