Larimichthys crocea (large yellow croaker): 104919234
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Entry
104919234 CDS
T04659
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
104919234 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104919234 (cdh15)
Cell adhesion molecules [BR:
lco04515
]
Cadherins
Major cadherins
104919234 (cdh15)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
104919234
NCBI-ProteinID:
XP_019109460
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Position
VIII:10561678..10578163
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AA seq
800 aa
AA seq
DB search
MAVRMLMVCVLGTLLCQVWSSAEPQSNEEELHVRTLYPWRNKGNGVVRVKRDWIIPPIRV
LENSKQVPEDLVQIKSDKIFTGEVIYKLEGPGVDQEPKNLFEIDDKTGVIRSKRPLDREK
YSSFTLKAFALSPSGERLENPTTIEIVVLDQNDNRPAFTQSQFVGTVPEFSVPGTSVMSV
SATDKDDPMTENAFLSYSIIGQESIPANAVTKTMFGINNETGAIYTRDVGLDREVVKGFR
LKLQIADMGGMGLTSEGVAIIHISDINNHAPQFSPDSYNMIAVENRKDYEIGRVNVTDKD
DHGTRNWEAKYFISNDLDGKFAISTDPATNEGVLTVVQPLDFEAQNEYTLILLVENVNPL
SNKAPNHPVSSATVVVTVVNENEAPHFKEDPIRIVVPESVDPGTLLKSNIAIDPDNSDLR
YEISRDPERWLDINRDTGDITTRRAFNMRSPHVRNNIYNAVVKVTDADGVSTTATLIITL
KETNDFPPQIFPLSGSVCRDTGRTSSGLIVTAVDEDFPPHAAPFTFEIPDYLPINWTINP
VNGTHAMLQPLVELEAGEYAVTVLVSDSGSPVMSAYAQVNVTVCLCDSFGDCKSEAGALL
GSSVGISFIALIIIMACIALLLLLLLLAVAVTTCGRRHHIKKGTGLLVGESEDDIRDNVF
NYDEQGGGEEDENAFNIDLLWNPHDAPSTPGLYYPGVPRGKQPLRKDAPHNLPSPTYPRR
PPADPTDIEDYINDGLEAADNDPNVPPYDTALIYDYEGEGSLAGSLSSIASGSSDGDQDY
DYLNDWGPRFKKLANMYDPR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggatgttgatggtgtgtgtgctgggcacactgctttgtcaggtgtggagc
tctgcagaacctcaaagcaatgaggaagagctgcatgttcggaccctttacccatggagg
aataaaggcaatggagtggtcagggtgaagagggactggatcatccctccgatcagagtg
ctggagaatagcaagcaggttcctgaagaccttgtccagatcaaatcggacaaaatcttt
acaggtgaggtgatctacaagttagagggaccgggggtggaccaggagcctaagaatctg
ttcgagatcgatgataaaacaggagtaatcaggagcaagcgaccgctggacagagagaaa
tacagcagcttcacgctgaaagcttttgcgctgtcccccagtggagagagactagagaat
cctaccaccatcgagatagtggtcttggatcagaacgacaacagacctgccttcactcag
agtcagtttgttggcactgtccctgagttctcagtcccaggcacgtcagtgatgtcagtg
tcagccactgataaagatgacccaatgacagaaaacgcttttctgagctactctatcatt
ggccaggagagcattcctgccaacgctgttaccaagactatgtttggtatcaacaacgag
acaggagccatctacacaagagatgtaggcctggaccgagaggtggtgaagggtttccgg
ttaaaactgcagattgctgatatggggggcatgggactaacaagtgaaggtgtggcaatc
atacatatatccgatatcaacaaccacgccccacagttcagccctgactcgtacaatatg
atagcagtggagaacaggaaggactatgagattggccgggtgaatgtgacggacaaagat
gatcatggaacacgaaactgggaggccaaatacttcatttcgaacgaccttgatggaaaa
tttgccatcagtacggatcctgccaccaacgagggtgttctgacggtggtgcagcctttg
gatttcgaggcacagaatgagtacaccctgattttgttggtggaaaatgtcaatcctctg
agcaacaaggctcccaaccacccagtgagcagcgccacagtggtggtgactgttgtgaat
gagaatgaagcaccgcatttcaaagaagaccccatacggattgtggtgcctgagtctgtg
gatcctgggactttactgaaaagcaacatcgccattgaccctgataactctgacctgagg
tatgagatcagcagagatcctgagagatggctggacatcaacagggatacaggagacatt
actaccaggagagcctttaacatgcggtctccacatgttagaaacaacatctacaatgct
gttgtcaaagttacagatgctgatggtgtgtcaaccactgccacactgatcatcacactg
aaggagaccaatgacttcccccctcagatcttccctctcagtggctctgtgtgcagggat
acaggacgaacaagttctggtctgattgtaactgctgtggatgaagactttcctccacat
gctgcaccctttacctttgaaatacccgattatctgccaatcaactggactattaatccc
gtcaatggaactcatgccatgcttcaaccccttgtggagctggaggcaggagagtatgcg
gtcacggtgcttgtgtcagactctggcagtccagttatgagcgcttatgctcaggtcaat
gtcactgtgtgcctgtgtgactcctttggagattgtaagtctgaggcgggagctctcctc
ggctcgagtgtgggaatcagcttcattgctctcatcatcatcatggcctgtattgcactc
ctactgctgctgctcctgctggctgtggcggtgaccacctgtggaagacggcaccatatc
aagaaaggaacaggtctgctcgtcggggaatcagaagacgatatccgtgacaatgtcttc
aactatgatgagcaaggagggggcgaggaggatgagaacgcctttaacatcgaccttctg
tggaatccccatgatgcaccttcaaccccggggctctactaccctggtgttcctcgggga
aagcagcccctcaggaaggatgccccgcataacctgccctcacctacctacccacggagg
cctcctgcagatcccactgacattgaggactacatcaatgatggcctggaggctgcagac
aacgatcctaatgtgcctccatatgacacagccctgatctatgactatgagggagagggc
tcactggcaggcagcctcagctcaatcgcttcaggcagctctgatggagaccaagactac
gactacctcaacgactggggaccacgctttaagaaactggccaacatgtatgacccacgt
taa
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