Larimichthys crocea (large yellow croaker): 104919282
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Entry
104919282 CDS
T04659
Symbol
smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104919282 (smarcad1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104919282 (smarcad1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HDA2-3
DEAD
HHH_3
Motif
Other DBs
NCBI-GeneID:
104919282
NCBI-ProteinID:
XP_019115418
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All DBs
Position
III:31518775..31529292
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AA seq
1054 aa
AA seq
DB search
MFNLERFRFDKKSATTATNKEQDGGSKSPESEKENKPAKMKPVKAPPKSHARGVVFEEVL
TIDLEEDELLSETKTKISLTRKSTNHKGKSNSNGEAYHTDEEDDEQEKKSSRLLEMFPQL
TRTDVMEVIGSTGTLDGAVAACLLKFGDKEGKGKKRKQDGSSSSQDSAETQPSKKRRPSV
VSDEEDDEGKEPSWEKQEAMVRRLQKKFPDQDKEELRMVLHEHDWNVEDALQVLQMFSDP
DNTSFSSPEREEKKSSKSKSKDKSNRDHRESKHHKDHRDNKKRRARSETEESVDESDASK
DSEDSDSEDGEDSKKINPLSTWLKKSSDSVSSSSSVKKTTTSSFTKPSSSTSTAQMLSRF
ASGTSIAKKQAAESKRKARASDERVSSEGESDNEEDTVSSEFEDSDEELYSKGGMTEMKK
EIITFFQNASIDELSLIAWCSVKKAQKIVELRPYDSWESLKEVFHKDNGLSEDLLSGCRV
VLKERKVVLGLMSKCETISSKMVKQVTEVMEKGTGAMKQPRILNSQFQLKPYQLIGLKWL
LLLHEHNLSGILADEMGLGKTIQAIAFLSELYQNGIEGPHLITVPSSTLDNWVRELKVWS
PSLKVLVYYGSIEDRRYLRHDILNNDVEFNVIVTTYNLAIGNDSDRSLFRKLRLKYAVFD
EGHMLKNMNSLRYRHLMAINAQRRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTTQLSK
MFSMKSHEEQSVFERDRISQAKLIMKPFILRRVKSEVLKQLPAKEDKVESCSMSEKQQVL
YQNLFKKLKGSTNGEKRELCNVMMQLRKMANHPLLHRQYYTTEKLKAMSKLMLKEPTHFD
ADAALIQEDMEVMSDFELHRLCQQYSSISSYQLETDLLLDSGKFHHLTKLLGSLKNKGDR
VVLFSQFTMMLDIVEVLLKHLKHRYVRLDGSTPIADRIVLIDEFNTDPDIFVFLLSTRAG
GLGINLTSANVVILHDIDCNPYNDKQAEDRCHRMGQTKTVQVVKLISKDSIEDCILQLGQ
KKLKLEQDMTAAEQGGEGTIPEDMASLLKASLGL
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacctggagcgttttcgttttgacaagaagtcagcgacgacagcgacaaacaaa
gagcaggatggcggctccaaaagtccagagtctgagaaggagaacaagccagctaaaatg
aaacccgtcaaagccccgccaaagtcccacgccagaggagtggtgttcgaagaagtcctg
actattgacctggaggaggacgagctcctctccgaaacaaagaccaaaatatcactaacc
aggaaatccacgaaccacaaagggaaatccaactcaaacggcgaagcgtatcacacggac
gaggaagacgatgaacaggagaagaaatcgagcaggctgttggagatgtttcctcagctg
acgaggacggacgtgatggaggtcattgggagcacgggcacgttggatggtgctgtagcc
gcatgccttttgaagtttggcgataaagaaggcaaaggcaagaaaagaaagcaggacggg
tccagcagttctcaggacagtgctgagactcaacccagcaagaagaggaggccgtcagtg
gtttctgatgaagaagatgacgaaggcaaagagccaagctgggagaagcaggaagccatg
gtcagaagactgcagaaaaagtttcctgaccaggacaaggaggagctgcggatggtgctg
cacgaacacgactggaatgtcgaggacgctctgcaggttttacagatgttctcagaccca
gataataccagctttagctcacctgagagggaagaaaagaaatccagcaaatcgaagagc
aaagacaagtcgaacagggatcacagagagtcaaagcaccacaaagatcacagagacaat
aaaaaaaggagagctcgtagcgagacagaggagagtgtagatgaatcagatgcttcaaaa
gacagtgaagactccgactcagaagatggtgaagattccaaaaagataaatcctctctct
acatggcttaaaaaaagttcagattcagtatcctcatcctcctctgtcaagaaaacaact
acctcttccttcacaaagccgtcctcctctacctctactgctcagatgctgtccaggttt
gccagtgggaccagtatagctaaaaagcaggccgccgagagcaagaggaaggcacgcgcc
tcagatgaacgcgtcagctccgagggggaaagtgacaacgaagaggacacggttagcagc
gagtttgaggactctgacgaggagctgtactctaaaggtggcatgacggaaatgaagaag
gagattatcacgttcttccagaatgcgtcgatagatgagctgtcgctgatcgcttggtgc
tctgttaaaaaggcccagaagattgtggaactgagaccctatgatagctgggaaagcctg
aaagaagtctttcacaaggacaatgggctgtctgaggacttactgtcgggctgcagagtc
gtcctcaaagagcggaaggttgtcctggggctcatgtccaagtgtgagaccatttcctca
aaaatggtcaaacaggtcactgaggtgatggagaagggcacaggagccatgaaacaacca
cgcatactcaacagccagttccagctaaagccctatcagctgattggcctgaagtggctg
ctgcttctgcacgagcacaatctgagcggtatcctcgctgacgaaatgggtttggggaaa
accatccaggctatagcatttttgtccgagctataccagaatggaatcgaaggtcctcac
ctcatcactgtgccgtcctccacactggataactgggtcagagagctgaaggtgtggtct
ccaagcctcaaagttctagtctattatggatctatagaggaccgccgctacctcagacat
gacatcctcaataacgatgttgaatttaacgtcattgtgaccacgtacaacttggccata
ggaaatgacagcgaccgtagccttttccgtaaactgcgtctgaagtatgctgtgtttgat
gaaggtcacatgctgaagaatatgaactctctgcgctaccgccacctcatggctattaac
gcacagcgccgcttgttgctgacaggaacccctttacagaacaacctcctagagctgatg
tctctcctgaacttcatcatgccctctatgttctccagctccaccacgcagctctccaaa
atgttttctatgaaatcccatgaggagcagagcgtctttgagagggatcgtatttctcag
gccaaactcatcatgaaaccttttatcctccgtcgagtcaagagcgaggtcctcaagcag
ctgccagccaaggaagataaggtagagtcttgctcaatgagtgagaagcagcaggtcctc
taccagaacctctttaagaaactcaagggttccaccaatggcgagaagcgcgagttgtgt
aacgtgatgatgcagctcaggaagatggccaaccacccactgcttcatagacagtactac
accacagaaaagctcaaagccatgagcaaactcatgctcaaggagccaactcacttcgat
gcagatgccgctctgatccaggaggacatggaagtgatgtcagactttgagctccaccgt
ctgtgtcagcagtactcctccatcagctcctaccagctagaaaccgacctcctgctcgac
tctgggaaattccaccacctcacaaagctcctgggctcacttaaaaacaagggtgacaga
gtggtactattcagtcagtttaccatgatgctggacattgtggaagtgctgctgaaacat
cttaagcatcgttatgtcagactggatggatccacacccatagctgacaggattgtgttg
attgacgagttcaacacggatcctgacatatttgtgttcctgttgtcaacacgtgccggc
ggcctcggcatcaacctcacctcagctaatgttgtcatcctgcatgacatcgactgcaat
ccctacaatgacaaacaggcagaggacagatgtcaccgtatgggccagaccaagaccgta
caggtggttaagctgatcagtaaggacagcatagaggactgcatactgcagctgggccag
aagaaactaaaactggagcaggacatgactgctgctgagcagggtggtgaggggaccata
cctgaagatatggcatctttgctcaaagcttcactgggactgtga
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