Larimichthys crocea (large yellow croaker): 104919304
Help
Entry
104919304 CDS
T04659
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00280
Valine, leucine and isoleucine degradation
lco00650
Butanoate metabolism
lco01100
Metabolic pathways
lco04146
Peroxisome
Module
lco_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
104919304 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
104919304 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104919304 (hmgcl)
Enzymes [BR:
lco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
104919304 (hmgcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
104919304
NCBI-ProteinID:
XP_010729592
LinkDB
All DBs
Position
XXIV:15303057..15307031
Genome browser
AA seq
337 aa
AA seq
DB search
MAAVMRLVNRSTLSSAMGQQYLAFSSAPKVQTAGVRASQALPEKVKIVEVGPRDGLQNEK
TIVPAETKIHLIDMLSQSGLTVIEATSFVSPKWVPQMADQVEVMKGISRKPGVSYPVLTP
NLKGFQAAVKAGASEVAIFGAASELFSKKNINCSVEESLQRFDEVMKAAKEAGVPVRGYV
SCVLGCPYEGKVAPEKVAHVAKRLYSMGCYEISLGDTIGVGTPGSMTEMLEAVSQEVPVK
ALAVHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGL
GIQTGVDLSKLMDAGAFICRTLNRKTSSKVAQATCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtcatgaggcttgtcaacagaagcactttaagctcagccatgggtcaacaa
tacctggcgttcagctccgcgccaaaggtccaaacagctggtgtacgagcaagtcaagct
cttccagaaaaggttaaaatagtggaggttggacccagagatggccttcaaaatgaaaag
accatcgtcccagccgagacaaagattcacctgattgacatgttgtcacagtcagggctg
actgtcatcgaggccaccagctttgtatctccaaaatgggttccacagatggctgaccag
gtggaagtgatgaaggggatctctaggaaaccaggtgtgtcttacccggtcctcaccccg
aacctcaaaggtttccaagctgctgtgaaggcaggagcttcagaggtagccatatttggt
gctgcgtctgagctgttcagtaagaagaacataaactgctcagtggaagagagtttacaa
cgctttgacgaggttatgaaagcagccaaagaggccggtgttccagttagaggttatgtg
tcatgtgtcctcggatgtccgtatgaaggcaaggtggcacctgaaaaagtcgcacacgta
gctaagcgtctgtactccatgggctgctatgagatctccctcggtgatactattggagtg
gggacaccaggcagcatgactgaaatgctggaggcggtgagccaagaggtgccagtcaaa
gctttggcagtgcattgtcacgatacctacggccaggccttggctaacatccttgtggcc
ttgcagatgggaatcagtgtggtagactcgtcagtagcaggactgggcggctgtccatat
gcccagggagcttctgggaatgttgccactgaagatgtagtctatatgctgcatggactt
gggattcaaacaggagtggacctctcgaagctgatggatgctggagctttcatttgtcgt
accctcaacagaaagacgagctccaaagtggctcaggcaacctgcaaactgtaa
DBGET
integrated database retrieval system
