Larimichthys crocea (large yellow croaker): 104919369
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Entry
104919369 CDS
T04659
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00310
Lysine degradation
lco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104919369 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104919369 (prdm2)
03036 Chromosome and associated proteins [BR:
lco03036
]
104919369 (prdm2)
Enzymes [BR:
lco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104919369 (prdm2)
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104919369 (prdm2)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104919369 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
104919369
NCBI-ProteinID:
XP_027135001
LinkDB
All DBs
Position
VI:complement(12783741..12800341)
Genome browser
AA seq
1705 aa
AA seq
DB search
MMAITGGTVETLEEIPAHVWKGLPDSLSLRPSAINQSRIGVWATQLIPKGKRFGPFVGEK
KKRSQVTSNVYMWEVYFPARGWMCVDATDPVKGNWLRYVNWARSSEEQNLFPLEINRAIY
YKVLKPIGPGEELLVWYTVEDNPEITAALEEERASSLNRKNSPRAKRARRKLLEKARQAG
LGGFKKTSVSILTVKEMWDGEEGLREEDERPLASQELQEARPMGSTDHREDMSAVMTGRG
NGEEEEEDEEEEEEDDLEEPSEVQQQTAQCSAATVPSQKSKQPGLSLTCGEESHKDSQVK
SESSSLEGQEPEVDPDLDLDPDPDGDLEVDPHGESYPCQHCERHFSTRQGLERHNHIHAI
TNQQTQLFKCRYCSKSFGSQVGRRRHERRHESGPKKRPGSLAGTASLLSPVVQTDASSPD
CTSPSSHYIAIGSQFTGGSLHNSEVQRKELGPHADRPYILDENGESKELHPCKYCNKAFG
THTNMRRHQRRIHERHLLPKGVRRKGMLLQEASVKQQQQPDESPSTSPPTVYVPSADTED
EADRDDYTVDISKNISENLSFYIDGKIVSTSSVSTCEVIEVDSRSAALFGLDTVIISPNQ
ISQALKVEARTSAAKQASTIGQPAGKRRTSTPPLVPSLKVETETASSSSSSSSTSSSSNL
LVGGLFQQAADSSAFQREKTVYLSPKLKQLLQTQDIQKSAITLITESHRLASPLSVTPLP
GASGRFKRRTASPPSSPQLSPACKTESCKAEVVSSYALKVPKLENRSVSPLGSLHDKEDS
DSQSLSGNNTHGQTSSNSGGNSCNQQPLDLSNSVSRKCDSLNKVHGDSALDLSLHRKSSI
EPELKGSPAPQPLTKKKKPNTSMLEKVLMNEYVGLGEEGPAVLANLSCFHSRSPNVASES
AHPSPPSLTPVTMNPSSPSASSVTSPTPPPPVLPTIPSPPTMPSSPLSQPSDSAALRPLP
VLSPKMSPRSMEHKSLSDSEEILSAEENGEEEESHNPEPLDSPKTSLEDPLNFSVTSSPP
ESVSVDLPTAGDVSLTATCSSLLNGKMNQNLESVTKKSPAALSSQPESSSSSSSPPPTSH
DPPPSVVSHPQIKIKEEPQHCVDELSVMNHAPQDSVESTPHPSAPDKPSDKTSEAEDMDS
SYCKTFVCNVCEDPFNSIKELSGHITEHAADWPFKCEFCVQLFGDAPALLTHRTTLHGVG
RIFVCSVCSKEFAFLCNLQQHQKDLHPNETCSHTTVESGKLRPQNYTDPSRAKEESSPSS
PAPEMTDEAAPHNDSDLAKEEPDLNGNHAEEGAEDPNEELYTTIKIMASEGAKPKGPDVR
LGINQHYPSYKPPPFPYHSRSHAASVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPEL
HQHILACANASDKKRYTPKKNPIPLKQIVKSPNGVVSPSAATAGQSAFRRMGQPKRLNFN
QDTGKTKMSALSKKKNQLVQKAISQKNKAATFAKKGTVKVEEELPSNVCPHCSREFTYPA
SLSKHMVFSCPMKPVVKKGRKGLAEVKKEDRNTNLRKKALDYDIQQRETEQKPLGKTRAR
SSGASDPEPSQPSKGKTAATLGRLKRPASFPAPVSVSKKTKKGHVQSLPPTPSALDTPSD
TAQQRPAIRMQRMGKEAAPKRLAEAKSPPSQQLKKEERFSLRTRDRVGGPVTRSLQMANA
APSAEVKTEDPPIQEPKETQEVLMK
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgatggccattactggagggacggtggagactctagaagaaattccagctcatgtgtgg
aaaggtttgcccgactctttgagtcttcgaccttctgctataaatcaaagccgtattggt
gtttgggccactcagctcattcctaaaggcaaaagatttggtccatttgttggagagaag
aaaaaaaggtcccaggtgacgagtaatgtttacatgtgggaggtttatttcccagcacgg
ggctggatgtgtgttgacgccacagaccctgtgaaggggaactggctgcgatatgtgaac
tgggcacgctccagtgaagagcagaatcttttccccctagagattaacagagccatttac
tacaaagtgttaaaacctatcgggcctggagaggagctgctggtgtggtacactgtggaa
gacaaccctgagataacagctgcactggaggaagaaagagccagcagtctgaacaggaaa
aattcacccagggcgaaacgagccagaaggaagctgctggagaaagccagacaggctggt
ttgggtggattcaagaagactagtgtaagcatacttactgtcaaggagatgtgggatggg
gaggaaggtctgagggaggaggatgagaggccattagcctcacaggaactccaggaagcc
cgtcccatgggaagcactgaccatagagaagacatgtcagcagtcatgacaggcagggga
aatggggaagaggaggaggaagacgaagaagaggaggaagaggatgatttggaggaaccg
agtgaagtacagcagcaaactgctcagtgttcagctgcgactgttcccagtcaaaaaagt
aagcagcccggcctgtcgctgacctgcggggaagaaagccataaagattcacaggtaaag
tcggagtcttcctctcttgaagggcaagaaccagaggttgatcctgatcttgaccttgac
cccgaccccgatggtgaccttgaggttgatccccacggagagtcctatccctgtcagcac
tgtgagcgccacttctccactaggcagggtctggaacgtcacaatcacattcatgccatc
actaaccagcaaactcaactgttcaagtgccggtactgcagtaaatccttcggctcacag
gtggggcggcggcggcacgagaggaggcacgagagcgggcctaagaaaaggcctggctct
ctggccggtactgccagtctactcagtcctgtggtgcagactgacgcctcaagtcccgac
tgcaccagcccaagtagtcactatatagccattggctcccagtttacaggaggatctctg
cacaactctgaggtgcagagaaaggagttggggcctcatgctgaccgtccctatatacta
gatgaaaatggggagtctaaggaactccacccctgcaagtactgtaataaagcatttggc
acacacaccaacatgcgcagacaccaacgcagaatacacgagcggcacttgttaccaaag
ggagtccgcaggaaaggcatgctgctgcaagaggcatcagtgaagcaacagcagcagccc
gatgagtcgcccagcaccagccctccgaccgtctacgtgcccagcgcggacacggaagat
gaggcggacagggacgattacaccgtcgatatatccaaaaacatttcagagaatttgagc
ttctacattgacggaaagattgtgtccaccagttcggtgagcacctgtgaggtaatagag
gtggactccagatctgcagctctgttcggtctggacacagtgatcatcagcccaaatcag
atcagtcaggcactgaaggtggaggcgagaacaagtgctgcaaagcaagcctctaccatc
ggccagccagcaggaaaaagaagaacgtctacgcctccacttgttcccagccttaaagtg
gagaccgaaacagcatcttcatcgtcttcatcctcctctacatcttcctcgtccaacttg
ttagttggagggctgttccaacaagctgcagattcatcagcatttcaacgagagaaaacc
gtttatctttcacctaagctcaaacagctccttcagacacaagacattcagaaatcagcc
attaccctgataacagaaagccatagactggcctcgccgctgtcagtcacaccgctgcca
ggagcatcgggcaggtttaaaagaagaacagcctctcctccgtcttctccccagctcagc
cctgcatgtaaaacagagagctgtaaagctgaggtggtgagctcatacgcccttaaggtg
ccaaagctggaaaaccgcagcgtgtcacctcttgggagcctacatgacaaggaagattca
gacagccagagcctttctggaaataatacgcatggccaaacgtcttccaatagcggcgga
aactcctgtaatcagcagcccttggatctgtcaaactctgtcagtaggaagtgtgacagc
ttgaacaaggtgcacggggattcagctcttgatttaagcttgcatcggaagagcagtatt
gagcctgagttaaagggaagtccagcaccacagccactgacaaaaaagaaaaagcctaac
actagcatgcttgaaaaggtgctaatgaatgagtatgtaggtctaggagaagagggccct
gcggtgttggcaaacttaagttgttttcattctcgctctccaaacgttgcatcagagtcg
gcccacccctctccgccttctttgacccctgtcaccatgaacccttcttcccccagtgcc
tctagtgtgacatcccccacaccgcctccgcctgtactacctaccatcccttctccgcca
actatgcctagctctcctctttctcagccttcagactctgctgcactgagacctcttcct
gtcctctcgccaaaaatgtctccaagatcaatggaacacaagtcactgtcagactccgag
gagattttgtcagctgaagaaaatggagaggaggaagagagccataaccctgagccactg
gactccccgaagacttcccttgaagatccccttaatttttcagtgacatcaagcccccct
gagtcggtgtcggtagatctgcccactgcaggagatgtttctctgactgcaacttgcagc
agtctgctaaatggcaaaatgaaccaaaatcttgagtctgtaacaaagaaatctcctgct
gctctttcctcgcagccagaatcctcatcttcctcatcatctcctcctcctacatcacac
gatccacctccatcagtggtttcccaccctcagattaagataaaggaagagcctcagcac
tgcgtagacgagttgtcagtcatgaatcatgcacctcaggatagtgttgagtctacacct
cacccgtctgcccccgataaaccgtctgataaaacctctgaggccgaggacatggactcg
tcatactgcaagacctttgtgtgtaacgtctgcgaggatccgttcaactccatcaaagag
ctcagtggacatatcacagagcatgctgctgactggcccttcaagtgtgaattctgtgtg
cagctgtttggtgacgccccggccctgctgactcaccggacaacactacatggagtcggc
aggatctttgtgtgctccgtttgttccaaggagtttgcgtttctctgtaacctccagcag
caccaaaaggatctgcatccaaacgagacgtgttcgcacacgaccgtagaaagcggcaag
cttaggccgcaaaactacacagatccatccagagccaaagaggagagcagtccctcatca
ccagcaccagagatgactgatgaagctgctccacacaatgactctgatttagcaaaagaa
gagcctgatcttaatggtaatcatgcagaggagggggcagaggaccccaatgaggagctg
tacactacaataaagatcatggcctcagaaggagcgaagcctaaaggcccagatgtgcgt
cttggcattaatcaacactaccccagttataaaccacccccttttccttatcatagccgt
tcccatgctgcatctgtggcctccgctaccaactttaccacccacaacataccacaaacg
ttcagcactgccattcgctgcaccaagtgtggcaacagttttgacaacatgcccgaactg
caccagcacatcttggcctgtgccaacgctagcgataagaagcgatacactcccaagaaa
aaccccatccccctcaagcaaatagtgaagagtccgaacggtgtggtgtcaccctcagca
gccactgcaggccagagtgctttccgtagaatgggtcagccaaagagacttaactttaat
caagatactggtaaaacaaaaatgagcgccctgagtaagaagaaaaaccagctggtccag
aaggcgatttcacagaagaataaagctgccacttttgcaaagaagggtaccgttaaagta
gaagaagagctgccctcaaacgtttgcccccactgcagtcgggagtttacttatcctgca
agtctcagtaaacacatggtgttcagctgtcccatgaagcctgttgttaaaaagggcaga
aaaggtcttgcagaggtgaaaaaagaggatagaaacacaaatcttaggaagaaggcttta
gactatgacatacagcagagagagacagagcaaaaacctctgggaaagaccagagctcgt
agctctggtgcatcagaccctgaaccctcccagccaagcaaaggaaaaacggctgctaca
ctgggccgactaaagaggcccgcctcgttcccagcaccagtttctgttagcaaaaaaact
aagaagggccatgttcagtctctacctcccaccccgtcagccctggacactcccagtgac
actgcacaacaacggcctgccatcagaatgcagcgtatgggcaaggaggcagcacccaag
agattagcagaggccaaatcaccgccatcacaacagctgaagaaagaggagcgcttctcc
cttcgaacgagggacagagtaggtggtccagtcaccaggagcttacaaatggccaacgcc
gctccttctgctgaggtgaaaactgaggatccaccaattcaagagccaaaagagactcag
gaggtgctgatgaagtga
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integrated database retrieval system