Larimichthys crocea (large yellow croaker): 104919422
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Entry
104919422 CDS
T04659
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104919422
04090 CD molecules [BR:
lco04090
]
104919422
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104919422
CD molecules [BR:
lco04090
]
Proteins
104919422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
ATP1G1_PLM_MAT8
DUF3587
Motif
Other DBs
NCBI-GeneID:
104919422
NCBI-ProteinID:
XP_019114012
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Position
VII:4337196..4408353
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AA seq
897 aa
AA seq
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MWKTGILLLLWVLLASGELQQEKEPRRLPPPGKLDFGYPPVGVYETLAYYEPGPIGILFH
MVQGFLCAVQPNAFPHDLIVKLAKDKFGAIKTEYQKPENIVLTLQAIYYEIGFLICAAVG
LLFAVLLPVVGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCA
YAANQNLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYPTAKNKVIYDLDNIGPL
LGGRIHDQLAVEVSPALDRVLQMAGAMRETKEALDNVHVGLEVLQEGTGKLDFNLSLVRT
SINRTLNDPGCHDEKSDATSAQLCRNIRQSLSQLQISANFTRLPKVNTQLEKVNNVLKTD
LSAIVQRGYSSLNDTPHMVIEQTRSVVENVKSLLDGIGNDISSFSKAFPVQSCLSNFTVF
INHAHAKIEDLYPEIDKMDFYRWIGCIGLCCMIVLVLAFNYLGLLCGTLGYDKHASPTTR
GCISNTGGTMLMAGVGFSFIFSWVLMGVVTTIFLAGGNMEKLLCEPFHTKEVFKVVDTPY
LVNPGWKNFIPGYMYNDSNLELTAESLYSTCKENKGIYSAMRLDKIFDISSFLNTAAFTK
DVVGQLDSVKIDLRGIILLEAEGKQNLRDFSEAGLSEINYADYLEEVNKGVTVVDLLSFA
RELEAQTDLMPRGALQTALKGHVGTLRQIHKQQIISMEQAMKYVRARGALNQSMRFLERT
ASDLPNKVLAILDAIDTAQYLISQNATHLINQETGTFSATIVGYFHQYIDWVKTSLALEV
APCKPFSNVVDTVEIFACSFLVDSMNTFWMGLGCSTLFLLPSIIIAVKLAKYYRRMDTED
VYDDIETVPMKTMEIGNNGYHSERSQGIPNPMMTSIPTYETMNRFPRASAPPRHIDW
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaccgggattctcctgctgctgtgggtgcttttggcgtctggcgaactccag
caagagaaggagccacggagactcccaccgccgggaaagttggatttcggttatccgcct
gtgggagtttacgagacactggcctattacgaaccgggaccgatagggatcctgttccac
atggtgcaaggttttctgtgtgccgtgcaacccaacgctttcccacacgatcttattgtc
aaactggcaaaggacaagtttggagccatcaagacagaatatcaaaagccagagaacata
gtgctgacccttcaggccatctactacgagataggcttcctaatatgtgcggcagtgggt
ctgctgttcgccgtcctgttgccagtagtcggcctctttttctgcatgtgccgctgctgt
gacaactgcggcggcgagatgcaccaacgccagaggaagaacgcagactgccggcgtggc
ctgctgggaacgctgctcttctccacctcgctggtcatcacgatcggagtactgtgcgca
tatgctgctaaccagaacctgagctctcaggtgaagaacattcggagattggtcaacagc
aacatgagagacctgcacaccttcgctaatgacacgccaatgcaaattgattacctaata
tcccagtaccccacagccaagaacaaagtcatctatgacctagataatataggtccatta
ttgggtggaaggatacacgatcagctggccgtggaggtcagtcctgccttggacagagtg
ctccagatggctggagccatgcgagaaaccaaggaggccctggacaatgtccatgttggt
ctggaggtcctccaggaaggaacaggaaagctcgacttcaacctgagcctcgtccggacg
agtatcaaccgcacccttaacgacccgggttgtcatgatgagaagtcagatgccacctct
gcccagctgtgccgcaacatccgccagtcactgtcccagctgcagatcagtgccaacttc
acacggctacccaaagtgaacactcagctggaaaaggtgaacaatgtattgaaaacagac
ctcagtgctatcgtccagaggggctactcatctttgaacgacacgccacatatggtgatt
gaacagaccagaagtgttgtggagaatgtaaagagtttgctggacggcattggcaatgac
atcagcagcttttccaaggcattccctgtgcagagttgtctgtccaacttcactgtcttc
attaatcatgcccatgccaagattgaggacctctaccctgaaattgacaaaatggacttc
tacaggtggattggctgtattggtctttgctgcatgattgtcctggtcctggccttcaac
tacctgggcctgctgtgtggtaccctgggatatgacaagcacgcctcaccaacaacacga
ggctgcatctctaatacaggaggaacgatgctcatggccggtgttggatttagcttcatc
ttctcctgggtgttgatgggagtggtgaccaccatcttcctggctggaggaaacatggag
aaactcctttgtgaaccctttcacaccaaagaagtcttcaaggttgtggacaccccatat
ctagtcaacccaggctggaagaacttcatccctggctacatgtacaacgactccaacctg
gagctgacggcagaaagcttatacagcacttgcaaagagaacaaaggtatctactcagcc
atgcgtctggacaaaatcttcgacatctcctctttcctgaatactgcagcgtttacaaag
gatgtggtgggtcagctggacagtgttaagatcgacctgaggggaataatcctgttagag
gcagaggggaagcagaacctccgggatttctctgaagcagggctgtcagaaatcaactat
gctgactacctggaagaggtcaacaaaggagtcactgtggtggacctgctctcatttgcc
agagagctggaggcccagacagacctcatgccaagaggcgctctgcagacagccctgaaa
ggccatgtcggcactctacggcagatccacaaacaacagatcatatccatggagcaggcc
atgaaatatgttagagcgaggggtgcattgaaccagagtatgaggtttctagagagaaca
gcctcagacctgccaaacaaagttttagcaattcttgatgccattgacactgcccagtac
ctcatctcccagaatgctacacatttaatcaaccaggaaacaggaacattctcagcaacc
attgttggctacttccatcagtacatcgactgggtcaaaacatctttggccttggaagtt
gcaccatgcaagccattcagcaacgtggtggacacggtggaaatttttgcttgcagtttc
ttggtcgactccatgaacacattctggatgggattgggttgcagcactctcttcctgctc
ccgagcatcatcatagcagtgaaactagccaagtactaccgcaggatggatacagaggat
gtttacgatgacattgagacagttcccatgaaaactatggaaattggtaataatggttat
catagtgagcgctcacaaggtatcccaaatcctatgatgacaagcatccctacctatgaa
actatgaacaggttcccacgggcctcggctcctccgaggcacatcgactggtga
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