Larimichthys crocea (large yellow croaker): 104919451
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Entry
104919451 CDS
T04659
Name
(RefSeq) contactin-4 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104919451
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
104919451
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Contactins
104919451
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Others
104919451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_6
C2-set_2
V-set_CD47
Tissue_fac
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
104919451
NCBI-ProteinID:
XP_019130230
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All DBs
Position
XV:18955122..19034506
Genome browser
AA seq
1029 aa
AA seq
DB search
MELLWKLILLLSLVECLAGSGVLQRPVFTKQPGSVVFPLQPGENRREVVFSCEAQGHPPP
FYRWKLNDSFILPRPGSHFSLMGGNLHISHLNKEGDVGIYQCLASNSFGTIVSREASLHI
AYLENFKTQRRSPVRVREGQGVVLLCGPPPHSGELTFTWIFNEYPSFVIQDTRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKSSVQGPPTPLVLRVDGVMGEYEPKIEVQFPEVVP
VAKSSTVKLECFALGNPVPTISWRRVDGASFGRKVDINKASGVLEIPYFQQEDAGIYECV
AENSRGRNSVKGKLSFYAAPHLTEKPQDVQKTIDDTLVWECKASAKPKPSYRWLKNGEPM
DHMEQDRVQVNNGVLTINSLNLADIGMYQCVAENKHGRIFTNAELRVIAIAPDFSQNLLK
AQTLARQGGDVLIECKPRMSPRGVISWRKGKEALRESHRVTVLDNGSLRISNVSKMDAGL
YTCVARNQFGVASSAGSLLVKESTVITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWF
FNEQLIHFGSHWAYFEKVGGRSAGDIMIRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRG
PPGPPVDCQVTEMSETTASVSWGPGMDNHSPILSYTIQARTPFSLGWQAVTTVPELLGGK
QLSATVTDLSPWVEYEFRVLATNNIGTGEPSKPSKKARTKEMLPKVTPPRVNGGGGVRSE
LVITWEPVPEELQSGPGFGYVVAFRPLGAQGWMQAAVTSPDASRYAFKNDTIPPFSPYQV
KVGVYNNKGEGPFSPVTTIYSAEEEPSRAPGRLRARSVSASEVEVTWKPLAWSNNRRRIL
GYELQYWGERQKQDTASVIRTVGNKTSLLIRDLEGSSTYYMSLRAYNSAGVGPQSNIVNV
TTKKPPPSQAPVKIMWNTSNSKVILRWDQVHALENESEVTGYKVMYSQDKHSRPSVVETN
TTSLELSLPVNQDYVIQIKPFSEGGEGSSSRQITIPKIAGSIAVGAAPQSSALAMVNLAA
LILTARTVL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggagttgctatggaaacttatactgctgctgtcattggtggagtgtctggcaggaagt
ggagtcctgcagaggcccgtgttcaccaaacaacccggcagtgtggtatttccccttcaa
cctggcgagaatcgcagagaggtagtgttcagctgtgaggcccagggacacccaccaccc
ttctacaggtggaagctcaatgactctttcatcctgcccaggccagggtcacatttctct
ctcatgggaggaaacttacacatcagccatctgaataaagagggagatgttggcatctac
cagtgcctggcatcaaactcttttggcaccattgtcagcagagaagccagtctgcacatt
gcatacttggagaacttcaagacccagagaagaagtccagtcagggttcgtgaaggtcaa
ggagtggtcttactgtgtggccctccaccccattctggagaacttacattcacatggatc
ttcaatgagtacccgtcattcgtcatccaggacacacggcgatttgtgtcccagaagaca
ggtaacctttacatcgccaaagtggaaccctctgatgtgggcaactacacatgtgtcgtt
accaacacggtcaccaaaagcagcgttcaaggaccaccaactcctctagtgctacgggtc
gatggtgtgatgggcgaatatgagccaaaaatcgaagtgcagttccctgaagttgtccct
gtcgctaaaagctcaacagtcaaactggaatgttttgcacttggaaacccagtgccaact
atcagctggagaagagtggatggagcctcgtttggcaggaaagtggacataaataaagcc
agtggagttttagaaatcccttacttccagcaggaggatgcagggatatatgaatgtgtg
gctgaaaacagcagagggagaaactcagttaaaggaaagctgtctttctatgctgcacct
cacttgactgagaagccacaggatgttcagaagactattgatgacactctggtgtgggaa
tgcaaagccagtgccaaacccaaaccctcatatcgctggttgaagaacggagagcccatg
gaccacatggagcaggacagggttcaggtgaataatggagtgctgacgatcaacagcttg
aatctggctgacatcggcatgtaccagtgtgtggcagagaacaagcatggtcgaatcttc
accaacgctgagctccgagtcatagccatcgctccagacttctctcagaacttgttgaag
gcccagactctggcccgacagggtggcgatgttctgatcgaatgcaaacccaggatgtct
cctcggggtgtgatttcttggaggaaggggaaggaagccttgagagagagccacagagtt
actgtgctggataatggcagcctgcggatttctaatgtcagtaaaatggatgctggactc
tacacttgtgttgcaagaaaccagtttggagtcgcaagtagtgctggcagccttttggtt
aaagagtcaactgtgatcaccagtccagcaggtcatctggacgtgactgtgggtgagagt
attgtacttccctgccaggtatcccatgatcccacactggaccttaagtttacctggttc
ttcaacgagcaactcatccactttggaagccactgggcgtactttgaaaaagttggtggg
cgctccgctggtgacatcatgatccgaaacattcaactgaggcatgctgggaaatataca
tgtgctgttcagactaaggtggacagtgtatctattgccactgatgtggtagtcagaggt
ccccctggcccccctgtggactgtcaggtgactgagatgtcagagaccactgcctctgtg
tcctggggacctgggatggacaaccacagccccatcctcagctacaccatccaggccaga
acgcctttctctctcggatggcaagccgttacaactgttcctgagctgctcggggggaag
cagctgtcagccactgtcactgacttgagtccctgggtggagtatgagttcagagtcctg
gcaaccaacaacattggaacaggagagcccagtaaaccctccaaaaaagcccgcaccaaa
gaaatgcttcccaaggtgacaccacccagagtgaacggtggcggtggagtacgttcagag
ctggtcatcacctgggagcctgttcctgaggagctacagagtgggccaggcttcggctat
gtggtggctttccgcccactcggggcgcagggttggatgcaggctgctgtcacctccccg
gatgcctctagatatgccttcaagaatgacaccatccctcccttctccccttaccaagtc
aaagtcggggtttacaacaacaagggagaaggcccttttagtccagtgaccacaatctac
tcagcagaggaagagcccagcagagctccagggaggttgagggcgaggagtgtatcggcg
tcggaggtagaggtcacctggaagccactggcctggagcaacaaccgcagacgcatcctg
ggctatgagctgcagtactggggcgagcggcagaagcaggacacagccagtgtgatcagg
acagtggggaataaaacgtcattactcatcagggatctggagggcagcagcacctattac
atgtccctgagggcctataacagcgctggagtgggtccacagagcaacatagtcaatgtc
acaaccaagaaaccaccccccagtcaagccccggtcaaaatcatgtggaacacttccaac
tccaaggtcatcctgaggtgggaccaagtacatgctttggagaatgagtcagaagtaaca
ggatacaaggtgatgtacagccaggacaaacacagccgtccaagtgtggtagagaccaac
accacatccctggagttgtcgctaccagtcaaccaggactacgtcatccagattaaaccc
ttcagtgagggtggggaaggcagcagcagccgccagattaccatccctaaaatagcaggc
tccatagccgtgggtgcagccccgcagtcttctgcacttgccatggtcaaccttgcagca
ttaatcctcacagccaggactgtactatga
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