Larimichthys crocea (large yellow croaker): 104919453
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Entry
104919453 CDS
T04659
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104919453
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
104919453
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Contactins
104919453
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Others
104919453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
V-set_CD47
C2-set_2
Ig_4
C2-set_3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
104919453
NCBI-ProteinID:
XP_019130235
LinkDB
All DBs
Position
XV:complement(18813157..18845325)
Genome browser
AA seq
1026 aa
AA seq
DB search
MTLPWKQLLLLSIIDCLADCLDSGSYHGPRWRMEPGDLFIPVDSIEEEATLTCDAKGIPP
PQYRWSLNGTLINLGLDRRRRLSGGNLIISSLDRYQDVGMYQCMAYNTVGAILSRRASLQ
FAYLDHFKVHTRSAVSVREGQGVVLLCGTPTSSGDLTYAWVFNEYPYFVQQDNRRFVSQQ
TGNLYIAKVETSDVGNYTCVVMNSITKGKVHSSPTSLILRTDGVMGEYEPKIEVNFPDNV
PAAKGSTVTLECFALGNPVPEITWKRANGVPFPSKVKMKYSNAVLEIPSFQQDDTGGYEC
VAENKMGKNMATGRLAFYAKPQWIQAMKDTALAIEERLYWECRANGKPKPSYTWLKNGQQ
LLSEDRIHVEDGVLSVSVLTLSDAGMYQCVAENKHGVIYFAAELMVLASPPDFTGNVLRA
LLKAKAGTTVTLECKPQAYPIASILWKKGNLPIHTNDRITLSPDGTLRLANVSKSDAGSY
TCFARNRFGMSSTTGRLLVTDPTRITQGPVDMEIIVGESIVLPCQVASDPVLDVSFSWAF
NGQLIAKGDGHFELVGGRTAGDLMIRNIQLYHAGKYICVVDTDVESLSAVAVLIVKGSPS
PPDSLTVEEVTDSTAQLVWSPGRDNGSPITNYLIQTRTPFTVGWQRVNTVPEIIDGNTLT
TTVVDLNAWVEYEFRVLAKNSVGVGEPSPVSVKTRTEDAVPDAAPGDVGGGGGSRSELVI
TWEPVPEELQNGESFGYIIAFRAFGEVSWTHVATSAPGASRYVYRNDSIAPFSPFHVKVG
TYNSKGQGPFSPVVTIYSAEIEPSGMPAGVWARSVSASEIEVNWQALSFTPERVLGYEVV
YWEDDTKPETMGKVRVPWNQTSVTVSGLAGNTQYFLTVSAFNTAGTGPFLPAINVTTKKP
PPTQPPLNIEWTLIGSQLSLYWEPVVAMESESEVTGYQLSYRRQRHKEINTLTTANSTAE
LTLPEEEDDYIILIRTLSEGGLGPASDPVRIHQLSMSARGSSSCSVDISPLSLLIAIAIP
TFRSTS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgccatggaaacagcttctactgttatcaatcatcgactgtctggcagattgt
ctggacagtggatcataccatggtccaagatggaggatggagccaggtgacttatttatt
cctgtcgactccatagaagaagaagctactctgacgtgtgatgctaagggaataccacct
cctcagtacagatggtcattgaatgggactctcataaatctgggcctggatcgccggcgg
cgtctgtctgggggcaacctcattataagcagtctggaccgctaccaggatgtagggatg
taccagtgtatggcgtacaacactgtaggagctatcctcagcaggagagcaagtctgcag
tttgcctacttagatcatttcaaagtccacaccagaagtgcagtgtcagtccgagagggg
caaggagtggtgttgctctgtgggacgccgacttcctcaggagaccttacttatgcatgg
gtcttcaatgagtacccatactttgttcaacaagacaatcggcgtttcgtctcccagcag
acgggaaacctttacattgccaaggtggagacctctgacgtgggtaactacacttgcgta
gtgatgaacagcatcacaaagggcaaagttcacagctcaccaacatctctgatcctcagg
acagatggagtgatgggtgaatacgagccgaaaatagaagttaatttcccagacaatgtg
cccgctgcaaaaggatcaacagttacgctggagtgtttcgcccttgggaaccccgtgcca
gagatcacttggaagagggctaacggcgttccgttccccagcaaagtcaaaatgaagtac
tctaatgctgtgctggagattcccagcttccagcaggatgatacaggaggatacgagtgt
gtggctgagaacaagatgggcaagaacatggccactggccgactggccttctatgccaag
cctcagtggatccaggctatgaaggacacagcgctggccatagaggagagactatactgg
gagtgccgggccaatgggaagccgaaaccctcctacacgtggctgaagaacggccaacag
ctgctctcagaggacagaatccatgtggaggacggagtcctgtcagtgtcagtgctgaca
ctatctgacgccggcatgtaccagtgtgtggctgagaataaacacggcgtcatatatttt
gctgctgaactgatggttttagcctctcccccagacttcacagggaatgtcctcagagct
ttgctcaaagccaaggcaggaactacagtgactttagagtgtaaacctcaggcctatcct
attgccagcattttgtggaagaaaggaaacctgcccattcacaccaatgacaggatcacc
ctttccccggatggaacattgaggcttgccaacgtgagcaagtctgatgcaggcagctat
acgtgcttcgctcggaatagatttggcatgtcaagtacaactggaaggctccttgttaca
gatccaaccagaatcacccaggggccagtggacatggagattattgtgggcgagagcatc
gtgttaccctgtcaggtcgccagcgaccccgtccttgacgtttctttctcctgggccttt
aacggacagctcattgccaagggagacggtcactttgagttagtgggtgggagaacagca
ggagatctgatgatcaggaacattcagctttaccatgccggcaaatatatctgtgtggtg
gacacggatgtggagagcctgtcagccgtggctgtattgattgtgaaaggttcccccagc
ccaccagactctttgacagtggaggaggtgacagacagtacagctcagctggtctggagc
cccggcagagacaacggcagccccatcaccaattacctcatccaaaccaggactcccttc
actgtgggctggcagagggttaacacagtgcctgagataattgatgggaacacactgaca
accactgttgtggacctcaatgcctgggtggagtatgagtttcgggttttggccaaaaac
agtgttggggttggagaacccagccctgtgtcagtcaagaccaggacagaggacgcagtt
cctgacgccgcaccaggtgatgtgggtggaggaggtggaagcagatctgaactggtcatc
acatgggagcctgtccccgaagaactacagaatggtgagagctttggttacatcattgct
ttccgtgccttcggagaagttagctggactcacgtggccacctctgcccccggtgcatca
cgctacgtgtaccgcaacgatagcatcgccccgttctctccatttcatgtcaaggttggc
acttacaacagcaaagggcagggtcccttcagccccgtggtcaccatctactctgcggag
atagagccaagtgggatgccagcgggagtctgggccagaagtgtctcagcctctgagatt
gaggtgaattggcaggctctctccttcacccctgaaagggtactgggctatgaggtggtt
tactgggaggatgacactaaaccagagaccatggggaaggttagggtgccttggaaccag
acctcagtcacagtgagcggcttggcaggaaacacacagtatttcctcacggtcagcgct
ttcaacacagccggcacaggcccctttctccctgcaattaacgtcaccaccaaaaagcca
ccaccaacccaacctcccctgaacattgaatggaccttaattggatctcagctgtctctt
tactgggaacctgtggtggcaatggaatcagagtcagaagttacaggctaccaactgtca
tacaggagacagagacacaaagagataaacacactcacaacagctaattcaacagcagag
ctgaccctccctgaagaagaggacgactacattatcctcattcgaacgctgagtgaagga
gggctgggcccggcctcagatcctgtacgaatccaccaactaagtatgagtgcccgtggc
tcgagttcctgcagtgtggacatctcccccctctccctgctcatcgccattgcaatacca
acattcaggtcaacgtcgtga
DBGET
integrated database retrieval system
