KEGG   Larimichthys crocea (large yellow croaker): 104919505
Entry
104919505         CDS       T04659                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104919505 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lco03041]
    104919505 (bcas2)
   03400 DNA repair and recombination proteins [BR:lco03400]
    104919505 (bcas2)
Spliceosome [BR:lco03041]
 Complex B
  Other components
   Prp19 complex
    104919505 (bcas2)
 Complex C
   Prp19-CDC5 complex
    104919505 (bcas2)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    104919505 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile THOC7 RRP36
Other DBs
NCBI-GeneID: 104919505
NCBI-ProteinID: XP_010729845
LinkDB
Position
XV:complement(1967872..1973282)
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLPTPDFST
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLEVMSQYGTNAWKVYNDNLAFMIEMAQKELQKFRKQIQDLNWQRKNDQLAGGAKLRE
QESNWVSLVSKNYEIERAIIQLENEMTQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccgggacggcttcagtagcaggcgaagtgttcgtcgatgctttgccatactttgac
caaggttacgatgcagcaggtgtcagagaagcggctgcagcgttggtggaggaggagacc
agaagatacagacccaccaagaattacctgagctacttgcccacacccgacttctctact
tttgagacagaaatcatgaggaacgaatttgagcggttggcggcacgccagcccatggaa
ctcctgagcatgaagagatatgagttgccagcgccctcatcaggacagaagaacgacatc
acagcgtggcaggagtgcgtgaacaactcgatggcccagctagagcaccaagcagtccgc
attgagaacctggaggtcatgtcacagtacggaaccaacgcatggaaagtctacaacgat
aacttagccttcatgattgagatggctcaaaaggaacttcagaaattcaggaaacaaatt
caagatttaaattggcagcgtaagaacgatcagttggcgggaggagccaaactgcgagag
caggagtcaaactgggtgtctctagtcagtaagaactacgagatcgagcgggccatcatc
cagctggagaacgaaatgactcagctcagacaacagcagggggacgagaacaaggagaac
atccgacaggacttctag

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