Larimichthys crocea (large yellow croaker): 104919506
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Entry
104919506 CDS
T04659
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X4
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
104919506 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104919506 (trim33)
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104919506 (trim33)
Protein kinases [BR:
lco01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
104919506 (trim33)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104919506 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
104919506
NCBI-ProteinID:
XP_010729846
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All DBs
Position
XV:1975817..1999601
Genome browser
AA seq
1186 aa
AA seq
DB search
MADNKGEEDMEPSANSDSLPSAPDNEPPQTNVDNAIIVIEANTKGSEETESNDNGTEAPT
PTSDGVDVSSSGGGSAGAGGEANGRASNTVSPAGSSSATSEPTTAETLAAVDAPVGGLTS
EMSPPPTAPAATPVSAPINLLDTCAVCKQSLQSRDCEPKLLPCLHSFCLKCIPQPERQIS
VQVPGPHGQTDTHIVNVMRCTVCHQDYKQSDIIDNYFVKDTTEATSTSDEKAAQVCTSCE
DNAGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIHTKEDADAASESVGTPGQRPVFCPV
HKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIESSVAKLQEKKNYVH
YSVSQVQSRLKELNETHRKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMRLVAQ
HKDTTQLAQQIHHVLNFCHWAITTGSSTALLYSKRLILFQVRQLFKARMEPAPQANGVVR
FFCDPTFWAKNVVNLGNLVIEKPPAPAQPPNVMVGGPPIPTGPQGHPGKHPGQINLAQLR
LQHMQQAAYAQQKQQHQQHQQQHQQQIQQQMRIASQMSQQHQRQAGPPMVQQQPPRLISM
QQLPRGPGGMNGGPGPPMYPSSHHMRLPGPPQGRMPTAQPRLNGQQYPPMMQPQLQRQHS
NPGHAGPFPVASLHNANPTSPTSASMAGAHAHRGPASPIIGPIELIPSVTNPENLPCLPE
IPPIQLEDAGSSNLGHLLSRYITASTQHQLGSVDMNPSPGLSTHSSGSSGPSNAHTPARP
SSTSSTGSRGSCSSAGRVGAGGGAAVEQVKVKQEPGTDDSYSCPASSLKTERGKDARSAC
MMSSPENSPLPVLGVVSTGQEALKALGERIKTEPQSETPCSGLNGSSATTSSPSTTTMTS
TTSLSSENNSNTPLTNGNLDKGTETKGGGLTSETGNPGGKEDDPNEDWCAVCINGGDLLC
CDRCPKVFHMKCHVPTIKIFPKGDFLCTFCRSLSKPEIEYCEDNKKIKEEQSLSPEDQRR
CERLLLHVFCHELSVGFREPVPSSVPNYYKIIKQPMDLKKVKKKLQLRSSQYYQSIQDFV
SDMRLVFKNCANYNEMTRIIQVYDEEKQINTQVGSEMAISGKAVSLYFEEKLQEIFPGQS
FPETPEPEETPDVKEKQEEDTDDSEEDFIQPRRKRLKTDEKVLHIK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaggaggatatggaaccgtctgctaattcggactcactgcct
tcagcgccagataacgagccaccgcagacaaacgtcgacaatgcgataatagttattgaa
gcgaatacaaagggcagcgaagaaacggagtcaaatgataacggtaccgaggcacctaca
cccaccagcgacggagtggacgttagcagcagcggcggcggctccgctggtgcgggaggg
gaagccaatggtcgcgctagcaacaccgtcagtccggctggttctagcagcgccacttca
gagccaacgacagctgaaaccttggccgccgtagatgccccagttggcggactcacctct
gaaatgtcaccgcctcctacggctccagcggccacaccggtatccgctcctattaatttg
ctggatacgtgcgcagtgtgtaaacaaagtctacagagccgagactgtgaacccaaactt
ctgccttgtctgcactcgttttgcctcaaatgtatcccgcaaccagagcgacagataagc
gtacaggtgcctggaccgcacggacaaactgacacacacatagtaaatgttatgcgctgt
acggtgtgccaccaggactacaagcagagcgacattattgacaactactttgtcaaggac
accacagaagccactagcacatctgatgaaaaggctgcgcaggtgtgcacaagttgcgaa
gacaacgcaggaaccatcggcttttgtgtggagtgcggagaatggctgtgtaagacttgc
gtggaggcccaccagagggtcaaaatcaccaaggaccacaagattcacacaaaggaggat
gctgatgccgcctccgagtctgttggtacgcccggacagaggcctgttttctgtcccgtc
cacaagcaggagccactgaagcttttctgtgagacctgcgacacgttgacctgtagggac
tgccagctacttgagcacaaggagcacaggtaccagttcctggaggaggctttccagaac
caaaaaggcatcattgagtccagcgtggccaaactacaggagaagaaaaactatgtccat
tactctgtgtctcaggtgcaaagcaggttaaaagagctgaatgagacacacaggaaggtg
gagcatgagattaaaatcgcagtatttactcttatcaatgagatcaacaagaagggcaag
tccttgctgcagcagctggagagtgtgaccaaagagcgcagtatgaggcttgtggctcag
cacaaggataccacccagctggcccaacagatccaccatgtgctcaacttctgccactgg
gccatcactactggcagcagcacagcgctgctctacagcaagaggctgatcctgttccag
gttcgccagctgttcaaggctagaatggagccagcgccccaggccaatggagttgtgcgc
ttcttctgtgatcccaccttctgggccaaaaatgtggtgaatctaggtaatttagtaatt
gagaaaccacctgcacctgcgcaaccgcccaatgtgatggtaggaggaccacccattcca
acagggccacaaggccacccgggcaaacacccaggacagatcaatctggcccagctccga
ctgcagcacatgcagcaggcggcctacgcacagcagaagcagcagcaccagcagcaccag
cagcagcaccaacagcagatccagcaacagatgcgcattgcctcccaaatgtcccagcag
caccagagacaggccggaccacccatggttcagcagcagcctccgaggctcatcagtatg
cagcagctaccaagagggcccgggggtatgaatgggggaccgggcccccccatgtaccct
tcctcccaccatatgcgtctcccgggtccaccacagggccgaatgcccacggctcagcca
agacttaacgggcagcaatatccccccatgatgcagcctcagctacagagacagcattcc
aaccctggccacgcaggccctttcccagtggcatccctacataatgccaaccccacaagt
cccaccagtgccagtatggccggtgcccacgctcaccgcggccctgccagccccatcatc
ggtcccatcgagctcatcccctcagtcaccaatcctgagaacctgccctgcttacctgag
atcccgcccattcagctggaggatgccggttccagcaaccttggacacctcctatctcgc
tacatcacagccagcacacagcatcagctaggctcagtggacatgaacccttcacctgga
ctgtccacacactcatctggatcttcaggtccgtcgaatgcacacacaccagcacgacct
tctagcacatccagcacgggcagcagaggcagctgtagctctgcagggagggtgggggca
ggaggtggagcagcggtggagcaggtgaaggtaaagcaggagcccgggacagacgacagc
tacagctgtccagcttcttctctgaagacagagcggggcaaagacgccaggagtgcctgc
atgatgagcagtccggagaacagccccctccctgtactgggagttgtatcgacagggcaa
gaagctctcaaggctttaggggagcgcatcaaaacagaaccccagtcggagaccccttgt
tctggacttaatggctccagtgccaccacctcctctccttccactaccactatgacctcc
actacctcgctgtcctctgagaacaacagcaacaccccgctcactaatggaaatttggac
aaggggactgagaccaaagggggcgggttgacttctgaaacaggcaatcctggtggcaaa
gaggacgatcccaatgaagactggtgcgctgtctgtattaacggtggtgacctgctgtgc
tgtgaccgctgtcccaaagtgttccacatgaaatgccatgtgcccaccataaaaatcttc
ccaaagggtgactttctctgcacgttttgccgaagtctcagcaagcccgagatagagtac
tgtgaagacaacaagaaaatcaaggaagagcagagcctgagtcctgaggaccaaaggaga
tgtgaacgcctcctactgcacgtcttctgtcatgagcttagtgtgggcttcagggaacct
gttcctagctctgtgccgaactattacaagattatcaagcagcccatggacctcaagaag
gtaaagaagaagctgcagttacggagctcacagtactaccagtccatccaggattttgta
tccgatatgcgcctggtcttcaaaaattgcgcgaattacaatgagatgactcgaataatc
caggtttatgatgaggagaaacagattaatacgcaggtgggatcagagatggcgatatcc
ggcaaggcagtgagcctgtactttgaggagaagttgcaggagatcttcccagggcagagc
ttccctgaaacgcctgaacccgaggagaccccggatgtgaaggaaaagcaggaggaggac
acagacgactctgaggaggacttcatacagcccagacgcaaacgattaaaaacagatgag
aaagtgctccatatcaagtga
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