Larimichthys crocea (large yellow croaker): 104919561
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Entry
104919561 CDS
T04659
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03030
DNA replication
lco03420
Nucleotide excision repair
lco03430
Mismatch repair
lco03440
Homologous recombination
lco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104919561 (rpa2)
03420 Nucleotide excision repair
104919561 (rpa2)
03430 Mismatch repair
104919561 (rpa2)
03440 Homologous recombination
104919561 (rpa2)
03460 Fanconi anemia pathway
104919561 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lco03032
]
104919561 (rpa2)
03400 DNA repair and recombination proteins [BR:
lco03400
]
104919561 (rpa2)
DNA replication proteins [BR:
lco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104919561 (rpa2)
DNA repair and recombination proteins [BR:
lco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104919561 (rpa2)
MMR (mismatch excision repair)
104919561 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
104919561 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Irp3-like_C
TAD2
Motif
Other DBs
NCBI-GeneID:
104919561
NCBI-ProteinID:
XP_010729913
UniProt:
A0A6G0IC02
LinkDB
All DBs
Position
XIII:complement(30441296..30445639)
Genome browser
AA seq
275 aa
AA seq
DB search
MWNQGGYSESGMGGGYTQSPGGFASPAASQGGEKKGRTRSSQIIPCTVSQLMSASQADEA
FKIGEVEVAQVTIVGIIRSTDKSMTNIQYKVDDMTGAPMDIKQWVDTEDPSMDSTVLPPG
TYVKVSGNLRSFQNHRSVVAFSVRPLEDMNEITSHMLEVVQAHMVLSKPQSTPGTGGGTS
SNVTPMSRPGMESMRGSYSGANDMANNGLSANQNQVLSLIRSCPDQQGISIQDLKLRLSG
ISLGVIKQAVEFLSNEGHIFSTIDEDHYKSTDNDN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccagggaggctacagtgagtcgggtatgggtggaggttacacacaatctcca
ggaggctttgcatcacctgctgcatcccagggtggagagaagaaagggaggacccgtagc
tcacagatcattccctgcacagtgtcacagctgatgtctgcctcccaggctgacgaggcc
ttcaaaataggagaggtggaagtcgcccaggtcaccatcgtgggtatcatcaggagcacc
gacaaatccatgaccaacatccagtacaaggtcgacgacatgacgggtgctcccatggac
ataaagcagtgggtagacacagaggaccccagtatggacagcaccgtcctccctccaggc
acgtacgtcaaagtctccggcaacctgcggtcctttcaaaaccacagatctgtcgtggcg
ttcagcgtcaggcccctggaggacatgaacgaaatcacctcacacatgctggaggtcgtt
caagcgcacatggtgctcagcaaacctcagagcacgcctggcaccggaggtggaacgagc
agtaacgtcacacccatgtcacggccgggcatggaaagcatgagagggagctattcggga
gctaatgacatggctaacaatgggttaagtgcaaaccagaatcaggtgctgagtttgata
agaagctgcccggaccagcagggcatcagcattcaggacctaaaactgaggctcagcggc
ataagtctaggcgtcatcaagcaagcagtggagttcctgagtaatgaaggtcacatcttt
tccaccatcgacgaagaccactacaaatcgacagataacgacaattaa
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