Larimichthys crocea (large yellow croaker): 104919602
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Entry
104919602 CDS
T04659
Symbol
myo1b
Name
(RefSeq) unconventional myosin-Ib isoform X6
KO
K10356
myosin I
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104919602 (myo1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lco01009
]
104919602 (myo1b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104919602 (myo1b)
03036 Chromosome and associated proteins [BR:
lco03036
]
104919602 (myo1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lco04812
]
104919602 (myo1b)
04147 Exosome [BR:
lco04147
]
104919602 (myo1b)
Protein phosphatases and associated proteins [BR:
lco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104919602 (myo1b)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Phagocytosis
Others
104919602 (myo1b)
Others
Actin-binding proteins
Myosins
104919602 (myo1b)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104919602 (myo1b)
Cytoskeleton proteins [BR:
lco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104919602 (myo1b)
Exosome [BR:
lco04147
]
Exosomal proteins
Proteins found in most exosomes
104919602 (myo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_16
AAA_22
TPR_Nup160_C
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
104919602
NCBI-ProteinID:
XP_019124493
LinkDB
All DBs
Position
XVIII:complement(6933874..6987497)
Genome browser
AA seq
1079 aa
AA seq
DB search
MEVKTSLLDNMIGVGDMVLLEPLSEDSFLENLRNRFDHNEIYTYIGSVVISMNPYRSLPI
YTPDKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEASKLVMS
YVAAVCGKGQEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGG
VISNYLLEKSRVVKQPRGERNFHIFYQLLSGASDDTLKKLKLDRDFSKYNYLSLDSAAVN
GLDDAANFRTVRNAMQIVGFMEDEVQSVLELVAAVLKLGNIEFKPESRCNGTDESRIKDK
NDLKEMCELLGIEQSVLERAFSYRTVEAKMEKVSTTLNVAQAYYARDALAKNLYSRLFSW
LVTRINESIKAQTKTRHKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLREE
QEEYVREGIEWTNIEYFNNAIICDLIENHQNGILAMLDEECLRPGTVTDETFLDKLNTIC
AEHQHFESRLSKNSKFLTDHSLPHSCFRIQHYAGKVLYRVEGFVDKNNDLLYRDLSQAMY
KATHSLIKQLFPEGNPTKVNLKRPPTAGFQFKASVGTLMKNLQTKNPNYIRCIKPNDKKA
SHIFTDSLVRHQARYLGLMENVRVRRAGYAFRQAYEPCLERYKMLCKRTWPHWRGPAREG
VEVLMADLQVPTEEYSYGRSKIFIRNPRTLFFLEERRRQCLQDLATLIQKIYRGWKCRRQ
FLLLKKSQIVVAAWYRRYAQQKKYQKIKSATTVVQSYTRGWQARKLLRELKYQKRCEEAV
TTISAFWHGTQVRREYRKFFRANAGKKIYDFIIQRIMQKYFLGLKNTMPPMSPIEKNWPA
RPYLFLDGVHKELRRIFHLWRCKKYRSQFTEEKKAVYEEKLEASEIFKDKKALYPSSVNQ
PFKGDYLEISKNPKYQKLNSAVDEKVLLADVVNKINRANGKGTARIFLLTKKSVVLADQK
TGQVKASVPLPDLASVSVSTQSDGFFALKLKEGSASAIKGDFLLSSEHLIEIITKLHRTG
ATDADREQLLVDISDEFLVQFKQDKVCVKFIQGAPKNGNSVSCKRKNNRLLEVSVPTTA
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaagacgtcacttctagataacatgattggggttggcgacatggtcctccta
gaacccctctctgaagactcattccttgagaacctgaggaaccgctttgaccacaatgag
atctacacttacatcggcagtgtggtgatctccatgaacccctacaggtccttgcccatc
tacacgccagacaaagtggaggagtatcgcaacaggaacttctatgagcttagtccacac
atctatgctttggcagatgaggcctaccgttcactgagggaccaggacaaggaccagtgc
atcctcatcacaggagagagtggggctgggaaaaccgaggccagtaagctggtgatgtca
tatgtggcagcggtgtgtgggaagggccaggaggtgaacaaggtcaaggaacagctgctg
cagtccaatcccgtgctggaggcctttggaaatgccaaaacagtgcggaatgacaactct
tccagattcggaaagtacatggacattgagtttgacttcaaaggagatcctctcggtgga
gtcatcagcaactatctgctggagaagtcacgcgtggtgaaacagccaaggggagagagg
aacttccacatcttttatcagctcttgtctggagcctccgatgacacactcaagaagctg
aagctggatcgggactttagcaagtacaactacctgagcctggactctgctgcagtcaac
gggctggatgatgcagccaacttcaggacagtcagaaatgccatgcagattgtgggcttc
atggaggacgaggtgcagtcggtgctggagctggtggcagccgtgctgaagctcggcaac
attgagttcaagccagagtcacgctgtaatggcaccgatgagagccgcattaaggacaaa
aatgatttgaaggagatgtgtgagctgctggggatcgaacagtcagtactggaaagagca
ttcagctaccgaacagtggaggctaagatggagaaagtatccactacactgaatgtggcc
caggcctactatgcccgagacgcccttgccaaaaatctctacagtcgtctgtttagctgg
ctggttaccagaataaacgaaagcattaaagcacaaactaaaactcggcacaaggtcatg
ggtgtgctggacatctatgggtttgagatatttgaggacaacagcttcgaacagtttatc
atcaactactgcaacgagaagctgcagcagatcttcattgagctgacgctgcgtgaggag
caggaggagtatgtccgagagggcatcgagtggaccaacattgaatatttcaacaatgcc
attatctgtgacctcattgagaatcaccaaaatggcatcttggccatgttggacgaggag
tgcctgaggccagggacagtcacagacgagaccttcctggacaaactgaacaccatctgt
gctgaacatcagcactttgagagtcgcctcagcaagaattcaaagttcctcactgaccac
agcctgccccacagttgcttccgcatccaacactatgctggcaaggtgctgtaccgtgtc
gagggctttgtagacaagaacaatgatctgttataccgagacctgtcccaggccatgtac
aaagccacccacagcctcatcaaacagctgttccctgagggcaacccaaccaaagtcaac
ctgaagagaccaccaactgctggatttcaattcaaagcctcagtgggcacactgatgaag
aacctgcagaccaagaacccaaattacatccggtgcatcaagccaaatgacaagaaggca
tcccacatcttcacggactcccttgtccgccatcaggcacgctacctcggcctgatggag
aacgtccgtgtgaggagagcaggctacgccttccgccaggcctatgagccctgtctggaa
cgctacaaaatgctctgcaaacggacctggccccattggagaggtcctgcaagggaagga
gtggaggtgctgatggctgacctccaggtcccaacagaagagtactcgtatggccgctcc
aagatcttcatcaggaacccaagaacgctcttcttcttggaggagaggaggaggcaatgc
ctgcaagatctggccacactcattcagaagatctaccgtggctggaagtgccgtcgccaa
ttcctgctgctgaaaaagagtcagatcgtggtggcagcatggtaccgccgatatgcgcaa
caaaagaaataccagaagatcaagagtgccaccactgtggtgcagtcctacaccagagga
tggcaggcccgcaaactcctgcgagagctaaaatatcagaagagatgcgaagaggcagtc
accaccatctcagccttctggcacggcacccaggtccgcagagagtacagaaaattcttc
agggcaaatgccggcaagaagatctatgacttcatcatccagagaattatgcaaaaatac
ttcttgggcttgaagaacaccatgcccccgatgtcacccatagaaaagaactggcccgct
aggccttacctctttctggatggcgtccacaaagagttgcggagaatcttccatctctgg
aggtgcaagaaatacagaagccaattcactgaggagaagaaggcagtttatgaggagaag
ctggaggcaagtgagatcttcaaggataaaaaggctctctacccaagcagtgtgaaccag
cccttcaaaggagactacctggagatcagcaagaaccccaaatatcagaaactcaacagt
gccgtggatgagaaggttctgttggctgatgtggttaacaagattaacagggccaatggc
aagggaactgctcgaatcttcctgctgaccaagaagagcgtcgtcctggctgaccagaag
acaggtcaggtgaaggccagcgttcctctaccagacctcgccagtgtgtcggtcagcaca
cagagcgacggcttctttgctctcaaactcaaagaggggtcggcctcagccatcaaagga
gatttcttactcagcagtgaacatctcattgagatcatcaccaaacttcaccgcaccggg
gccacggatgcagacagggagcagctcctcgttgacatctcagatgaatttctggtgcag
ttcaaacaagataaagtgtgcgtgaaattcatccaaggagcccccaagaatggcaacagt
gtgtcctgcaagcgcaagaacaaccgcctgctagaggtgtcggtgcccacaacggcatag
DBGET
integrated database retrieval system
