Larimichthys crocea (large yellow croaker): 104919626
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Entry
104919626 CDS
T04659
Symbol
ss18l1
Name
(RefSeq) calcium-responsive transactivator isoform X2
KO
K15623
protein SSXT
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104919626 (ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104919626 (ss18l1)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104919626 (ss18l1)
GBAF(ncBAF) complex
104919626 (ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
104919626
NCBI-ProteinID:
XP_010729988
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQNKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTSNMSMGPGGMGQSGGHGQSNLNDNVAPGLPPTSMMQSQMS
NGPSHAPMQQQSGQVQSAIPSASLSLPASSYGSSASASGYSHTAPSSQGSMIQGPGPGYG
SSSSSSSTPSSSSSSSRSNLNMQSNQVTMMHQQSATPHYSSAQAGGQHYQGQQTMGMMGQ
GSQGSSMMSQRPMGSYRSSQQGSAQQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEY
SYQQSSYGEQGYDRSFDESSQHYYEGGNSQYSQQQSQYQQGSGQQQQFSQQQYSSQQGYS
GQQQGYGPGQGGSSQYSQYQQGQSQQYGSYRSSQGGPGAQTQRPYAYEQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattttcatcggcgcgccccaggagtaaaggggaggtgacacagcaaacg
attcaaaagatgctggatgaaaatcatcatttaatacagtgtataatggattaccaaaac
aaaggcaagacagctgaatgcacgcagtatcagcagatcctgcacagaaatcttgtttac
ttggccacaatagcagattcaaatcagaacatgcagtcactactacctgcacctcccact
tccaacatgtccatgggtcctggaggaatgggccagagtgggggacacggccaaagcaac
ctcaatgacaacgtggcaccaggattgccccccacatcaatgatgcagagccaaatgagc
aatggccccagccatgctcccatgcagcagcagtctggtcaggtgcagtcggctattccc
tccgcttccctcagcctgccagccagcagctatggtagctcggcctcagcttctggctac
agccacactgcgccctcctcccagggcagcatgatccagggccctgggcctggctatggc
tcttcctcttcttcttcctccacaccctcatcctcctcttcctcctcccgcagcaacctc
aacatgcagtccaaccaagtcactatgatgcaccaacagtctgccactccacactactcc
tcagcccaggcaggggggcaacactatcagggacagcagaccatgggcatgatgggtcag
ggcagtcaaggaagcagtatgatgtctcagagaccgatgggatcctaccgttcctcacag
caaggatctgcacagcagtacatgggacaagacgagttctacggagagcagtatggacac
actcagagctccagcgagcccataaaccagcagtattaccctgatggccatggggagtac
tcatatcaacaatcttcatatggtgagcaaggctatgacaggtcctttgatgaatcttca
cagcactactatgaaggaggtaactctcagtacagtcaacagcagtcacagtatcagcag
ggctctggccaacagcagcaattcagccaacagcagtactcctctcaacaaggctacagc
ggacagcaacagggttacggtcctggccagggtggatcctcgcaatattctcagtatcag
cagggtcaaagtcaacagtatggctcctaccgctcctcccagggaggccctggagcacag
acgcagagaccctatgcctatgaacagggtcagtatggaaattatcagcaataa
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