Larimichthys crocea (large yellow croaker): 104919628
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Entry
104919628 CDS
T04659
Symbol
taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104919628 (taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lco03021
]
104919628 (taf4)
03036 Chromosome and associated proteins [BR:
lco03036
]
104919628 (taf4)
Transcription machinery [BR:
lco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104919628 (taf4)
Coactivators
SAGA/TFTC/STAGA complex
104919628 (taf4)
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104919628 (taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
LED_rpt
Motif
Other DBs
NCBI-GeneID:
104919628
NCBI-ProteinID:
XP_019126923
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MAAGSDLLDDVFFNTELDEKVVSDIVGSLESELSGSDRVNTAAGVQSAGNYAGKSVVGSN
SNVQGSKMGLSQQELAKAGTGVQGGVINSAGSHGSSMDGAAGTTPVVAAAAAAAAGQSMT
AAQSQPKPVVASGVVTVMSDATAGVGKAVTSGVQTLNGSTVVMNCHITAGASADSGGNNS
QPAVTLVNNGPVSVSKGSAAVLSATPSTIIRTCSTSSAHNAVISSVKSVPTVTLVRPPMQ
TPTIITSQSGGNPTTVLTSAAVSVGSTAASLVNKTGGHVVASTVATTATVRSPTVLQNLR
TSVPSTIATTPPAGIRAIAPQVLAPRLTQPQQNIQNIQLPPGMVLVRSESGQLLVIHQQT
LAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQAPGASLLARPVTPTTIIKQGSTVQTTV
TATTTLQRPPVLQNTIMVGGTATTPGQPLGTPTTVQPGSAATAVTQRVGPLGATGTPVTP
TAITAETLENVKKCRNFLSTLIKLASSGKQSSETTANVKELVKNLLEAKIEPEDFTSRLY
RELNSSPQPYLVPFLKRSLPALRQMTPDSEAFIHQSLLPQTSTPAAAAASSTALTAVVLR
PPLSTAATTATSTAATKTTVISLTQTPHSKPGLIVPQQQGTIVRPQVTLAQSHLVTLRGQ
SHSRIVVGQPQVVKQLQTAVKPTLAPGAKGVQVVSQTPLTAAQKIKLKEAGGGTFRDDDD
INDVASMAGVNLSEESARILATNSELVGAVTRSCKDETFLSTSLLTRRALEIGKKFGVSE
LGTDVINYVSHATQQRLQNLLEKVSQVALQKNTTFKEDERFEQADDVRAQLKFFEQLDQM
EKQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIG
PRKKRKMDSPVRGASAEGSGSGPSQPGGSSGAGSRQFMRQRITRVNLRDLLFCLENERGT
SHSQLLYKGFLK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatctgctggatgatgttttcttcaacacagagctggacgaaaaa
gtagttagtgacatagtcgggtctctggagtctgagctgtcagggtcagatcgcgtcaac
acagcagccggggttcagtccgcggggaattacgccgggaagtcagttgtagggagtaac
tccaatgttcagggcagcaaaatgggactttcacaacaagagcttgctaaagcagggaca
ggagtacaaggaggtgtcattaacagtgcggggtcccacggttcaagcatggatggagca
gccgggaccacaccggtggtagcagcagcagcagcggcggcggcgggacagagcatgaca
gccgctcagagtcagcccaagccggtggtagctagcggagtcgttacggtaatgtcagac
gcaacagctggcgttgggaaagctgtgacgagcggagttcaaactttgaatggaagtacc
gtggtgatgaactgtcatatcaccgcaggagcttctgctgacagcggcgggaacaactcg
cagcccgctgtcacgctcgtcaacaacggaccagtctctgtgagcaaagggagcgcggcg
gttctgtccgcgacacccagcactattatccgaacttgttcgacttcgagcgcgcacaat
gctgtgatttcatctgtgaaaagtgttcccacggtcacgcttgtgaggccacctatgcaa
actcccactatcatcacctcgcagagtggcggaaaccccaccacagttttaacatcagcg
gccgtcagtgttggcagcacggccgcctctcttgtgaacaaaaccggcggacacgtcgtg
gcttcaaccgtggcgacgacggccaccgtaaggagcccgactgttctgcaaaacttgagg
acttcagtgccgtcgacaattgccaccactcctcctgctggaatacgagctattgctcca
caagtgttggccccccgactcactcagcctcagcaaaacatccaaaacattcagctccct
ccaggcatggtcttggttcgcagtgagagcgggcagctgttggtgattcaccagcagacc
ttggctcagatgcaggctcagtcgcagtcccaaagtgccatgacaccacgacctgctgcc
cccaccagcactccacctgtccagatcacttctctacaggctccaggtgcatcgctcctg
gctcgtccggtcacccccaccaccattattaaacaaggttccacagtccagaccactgtg
acggccaccaccacactgcagaggcctcctgtactgcagaacaccatcatggtgggggga
actgccactaccccaggacaaccgctaggaacacccaccacagtgcagcctggatctgca
gccacagcagttacacagagggtggggccccttggggccactgggacccctgtcactcca
acagctatcacagctgagacactggagaatgtgaaaaagtgtagaaactttctgtctaca
ttaatcaagctggcatccagtggaaaacagtcctctgagactacagccaacgtcaaggag
ctggtcaagaacctgctggaagcgaagatagaacccgaagacttcaccagtaggttatac
cgagagctcaactcctcaccacagccgtaccttgtgcctttcctgaagagaagtctccca
gcactgcgtcagatgactccagactcagaggccttcatccaccagagcctactgcctcag
accagcactccagcagcagcagcagcatcatccacggccctcaccgccgtggtgctgcga
ccgcctctctccactgccgccactacggccaccagcactgccgcgaccaaaaccacagtt
atcagcctcactcagacacctcacagtaaacctggactgatagtgccccagcaacagggg
acaattgtgaggccacaggtgacgctggcacagtctcacttggtaacactcagagggcaa
tctcatagccgcattgttgtgggccagccgcaggtggtcaaacagcttcagacagctgtg
aagccgacgttggctcctggggccaaaggagtacaagtcgtcagtcagacccctctcact
gctgctcagaagatcaagctgaaggaagcaggagggggaaccttcagggatgatgacgac
atcaacgatgtagcctccatggcaggagtcaatctgtcggaagagagtgcccgtatctta
gcaaccaactccgagcttgttggcgcagtgactcgctcctgtaaagacgagaccttcctc
tccacctctttactcacccgcagagctctggagatcggtaaaaagtttggtgtcagcgag
ttgggcacagacgtgatcaactacgtttcccacgctacgcagcagcgactacaaaacttg
ctggaaaaggtttcgcaagtggcactgcagaaaaacacaaccttcaaggaggacgagcgg
tttgagcaggccgacgacgtgcgagcgcagcttaaattcttcgagcagttggatcagatg
gaaaaacaaaggaaagaagagcaggagagagagattctcttaaaggctgccaagtctcgg
tcacggcaagaggatccagagcagctcagactgaaacagaaggccaaagagatgcagcag
caggagctagctcaaatcagacagagagaggccaatctaacggcactggcagcaatcggc
ccgaggaaaaaacggaaaatggactctcccgttaggggtgcaagtgcagagggctcaggg
tcaggcccctctcagcctggaggctccagtggagcaggctccagacagtttatgcgacaa
cgcatcaccagagtcaacctcagggacctgctcttctgcctggagaatgaaagagggacc
agtcactcacagctgctctataaaggcttcctcaaatag
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integrated database retrieval system
