Larimichthys crocea (large yellow croaker): 104919688
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Entry
104919688 CDS
T04659
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lco04054
]
104919688 (nlrc3)
Pattern recognition receptors [BR:
lco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104919688 (nlrc3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
Ferritin_2
LRR_12
Motif
Other DBs
NCBI-GeneID:
104919688
NCBI-ProteinID:
XP_010730059
UniProt:
A0A2I6SDB7
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Position
XVI:9384944..9400837
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AA seq
1134 aa
AA seq
DB search
MEKKAHYDSILDRSKRIMWQDDCYVDLQSTSCSVSSQAESEDIGWIQKHQDQLQRFITTS
FLEEMLTHLRKMDVLSSTEEKKIKEAGQLQDQVNMLTTTLTSKDSQGSDVVQAFIESSDS
QVAQLIINHESMVKEHQEVLLRRYEQYRDRDSVSCPKLNISSRTLLLVDGLSDLQQKEHD
LMQVGVTRGRKRNHLRQLGLAKLFEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFIRQWSQ
GAICTDVSFVLPFTFCELNSLEKISAERLVKMAFPHLKDPDLVLNSSCRTLLILDGLDEF
RCTLNFSDAAPCNDPKKEVSIDDLITNIIRGNLLPDVAVWVTSRPRVASLIPGGLVDRVT
EIPGFSPKDIQLFLNHHFSERDFASKIWAHLESNNIFMVMCYIPCICWIVADTLMYIMQS
ETPESLPRTCTELYAHFCSMKAEVGEPRGREPVKMEQLHGNNRKLLGNLGRLAFYGLLKH
KYTFSEQDLRAYGIDLLLTQCSLGSGVLVREESSIYTTYRFTHLTLQEFLAATFYHVSSK
RAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLTGLLSSVVLKPLAGL
LALGKEDGNQKAWAAGFLQSLLVSGGAVVSLRAVNLAYCLQELQHTELLRSVEEDLQLGN
LAGKLTRAHCVVLGYLLHVSPDCSERTNLTGSLTYTTVKCLLPQLLYCSHLRLENNHFKD
DVMELLGSLLSAKDCHIQKMSLADNAISNKGAKALSRALLVNRTLTSLNLRNNKIGSKGA
KFLAEALKMNQVLVSVNFQNNAIEEEGAQAIAEILQCNRKLVSLNVQKNTIGAGGAKRIA
DALKTNRTLTKLILCSNQLGDKGTIALAEALTVNHTLLSLQLQSNSISNKGMTALTKALR
LNRGLVSLNLRENSIGVEGAKNMAHALHENNSLQELDLTANLLHDEGVQAIAGAIKLNRG
LTSLHLQWNFIKSSATKALAQALLSNSTMQLLDLQENAIGNEGVIFLAEALKTNSSLRTL
CLQGVSAGTSGAIAMANALLTNQTLQTLDLRGNTVGMEGAKALANALKNNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRTNAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggcacactatgattctatcctggaccgaagcaaacgcattatgtggcag
gacgactgctacgtggatcttcagtctacgtcctgctccgtctcttcacaagcagaatca
gaggatattggttggatccaaaagcatcaagaccagctgcaacgtttcattacgacctcc
ttcctggaggagatgttaacccacctgagaaaaatggatgtgctgagttcaactgaggaa
aaaaagattaaggaagcaggccagctgcaggaccaggttaacatgctcacaactaccctc
accagcaaggactctcaagggtctgatgttgtccaggcctttatagagagttcagattct
caggtggcccagctcatcataaaccacgagtccatggtaaaagagcaccaagaggtgctg
ttacggagatatgaacagtacagagatagagattcagtcagctgccccaaactgaacatc
tcttcaaggaccttacttctggttgatggactttcagacctccagcaaaaggaacatgac
ttaatgcaggttggagtgactcgaggaaggaaaagaaatcatctcagacagttggggctg
gccaaactctttgagcccttgacccgggtcagtttacctcccagggtttccctcacagtt
ggggtggctggcattggcaaaacaacctgggtccggcacttcatcagacagtggagccaa
ggggccatctgtacagacgtgagctttgtcttgcctttcactttttgcgagctgaactca
ctggagaaaatttctgctgagaggctggtcaaaatggcctttcctcatttaaaagacccc
gatctcgtcctgaacagttcctgccgcacgctgctcatacttgatggtttggacgaattc
cgctgcacgttaaatttctcagatgcagctccttgcaacgacccaaaaaaagaagtgtcc
atcgatgacctaattactaacatcatccgggggaatctgctccctgacgtagcggtgtgg
gtgacctccagaccaagagtggcctcactcatccctggaggactggttgacagggtgact
gagatcccaggattcagtccaaaggacatccagctcttcctcaaccatcacttctctgag
agggattttgccagcaaaatatgggctcacttggagtccaataatatcttcatggtgatg
tgctacataccatgcatttgctggatagtagcagataccctgatgtacatcatgcagagt
gaaacaccagagagccttccaaggacttgtactgagctgtacgctcacttttgctccatg
aaagcagaagtaggtgaaccaagaggcagggagcctgtaaaaatggagcagctccatggg
aacaaccgcaaactgctggggaatcttggacgactggcgttttatgggctcctcaaacac
aagtacaccttcagtgagcaggacctcagggcctatgggatagatctgctgttaactcag
tgcagccttggttctggagttcttgttcgggaggagtcgagcatatacacaacataccgg
ttcactcatttgactctccaggagttccttgcagctactttctaccatgtatcctccaag
cgggccatctttgacctattctcagagagcaccatgtcttggcccaagatcggtttccag
aaccactttagaagtgcctttcagcattctcaacaggctgaagatggtcacttggatgtg
tttgtgcgcttcctgacaggcctgctgtcctcagtggtactgaaacctctcgctgggctt
cttgctctcgggaaagaagatggcaatcagaaggcttgggcagcagggtttttacaaagc
ctcttggtcagcgggggtgctgttgtgtccctgcgtgcggtcaacctggcttactgtttg
caggagctgcaacacacagagctactgaggagcgtggaagaagatttacagcttggtaac
ctagcagggaagttaacacgggctcattgtgttgtgctgggctacctgctgcatgtgtct
ccagattgcagtgaacggacaaacctaacaggctctctgacctacacaactgtgaaatgt
ttgcttccacagttgctgtactgcagccatctcaggttagagaataatcacttcaaagat
gatgtcatggaattgctgggaagccttctgagcgccaaagactgccatatccaaaagatg
agtttggcagacaatgccatcagcaacaaaggtgccaaagccctgagtcgagccctctta
gtgaaccggacgctaacatctctcaatcttcggaacaacaaaatcggctctaaaggtgca
aagttcctggcagaggccctgaaaatgaaccaagtcctggtgtcagtaaacttccagaac
aatgctattgaggaggaaggtgctcaggccatcgcagaaattctgcagtgcaaccgcaaa
ctggtgtccctgaatgtacagaagaacacaattggagcaggaggagccaaaaggattgca
gatgcgctcaagacaaaccggactctcacaaaactgattctttgtagtaaccagctcggg
gacaaaggaacaatcgctctggcggaggctttgacagttaaccacactctgctctcgcta
caacttcagagtaactcaattagcaacaaagggatgacagccttaaccaaagcactaagg
ttgaaccgtggccttgtgtccttgaatttaagggagaactccatcggtgtggaaggagcg
aagaacatggcccacgccctccatgaaaacaactctctacaagagctggatctcacagct
aacctgctgcatgatgaaggggttcaagctattgctggcgcaatcaagttgaaccgaggc
ctcacctctttgcatctccagtggaatttcatcaagtcctctgccaccaaagccctggcc
caagcactcctttccaattccacaatgcagctcttggatctacaagagaatgctattgga
aatgaaggtgtgatttttcttgctgaagccctgaagaccaactcgtctctgcgcacatta
tgtctccagggcgtctcagcgggcacaagtggcgccattgcaatggcaaatgctctattg
accaaccaaaccctgcagacattagatctacgtgggaatactgttggcatggagggagcc
aaggctctggctaacgcactgaaaaacaacagaagtctcaagtcactgaatctgcaggag
aactctctgggtatggatggagccatattcattgcaacagccttgaagggaaaccatcag
ctgacatacatcaatttgcaggggaatggcattggcgaatctggagcaaaagtcatctct
gatgctatacgaaccaatgctccgggctgcgtggtcgacatctga
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