Larimichthys crocea (large yellow croaker): 104919723
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Entry
104919723 CDS
T04659
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X2
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104919723
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
Other
104919723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Interfer-bind
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
104919723
NCBI-ProteinID:
XP_010730094
LinkDB
All DBs
Position
XXII:17393226..17447063
Genome browser
AA seq
2103 aa
AA seq
DB search
MGGAEAPLISPPCLAGQQGWRDLRGAQSPVQHGDPPGQKTAPHTCQDCQIFLKNIPAIYG
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGELYAG
QSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTISWFSNTEPIVPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCAAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMEVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGE
WGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGIK
AVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLSRG
KQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILSFGGTVTTPWMKEVRLPCSSVGEPA
PTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIVNL
VVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSER
SFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPLLTHINSTHAGL
NLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTTQLFLSELREATWYELKMKACNSAG
CGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLGVALLFIIRKKRKE
KRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGED
KAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPGTNPVSRKSIKSAH
SSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGRN
SMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSMT
SLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKTDPFFRKQGE
LHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQQALTLGHSGLGSLGASSGTATLP
QRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDSLLESSSSALGRLQKQSVGAYSKSY
TLV
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggctgaggcgcctctcatttcccctccatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagacccgcctggccaaaaaacc
gcgcctcacacttgccaggattgccaaatattcctgaaaaatatacctgctatttatggc
atgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggatgtg
ggctccaccaggctgtactttgtgaatgcctccctgcagagggtaacctactccagctcg
gtgggggtgtccctgccctgtccagcagggggcacccccagtgccatactgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgacacgtgcacgccaatggc
accctacaactgtaccccttctcgccctccgcctacaacagctacatccacgacaacgac
tacttctgcactgccgaaaaccaagccggcaagatccgcagccccaacatccgcatcaaa
gctgttttcagggagccctacaccgtgcgggtggcggaccagcgctcgatgcggggcaac
gtagctgtgttcaagtgcctcatccccgccgccgtgcaggagtacgtcagcgtcgtgtcc
tgggagagagacaccgtttccatcgtcccaggtaacaggttctcgctgacctccttcgga
gctctttacatctctgatgttcagaaggaggatgccctctccacataccggtgcatcacc
aaacataagtacagcggcgagacgcgccaaagcaatggagccaggctctctgttatggac
cccaacgagtcctcacccaccatcctggacagtttccaagcaggggagttgtacgcaggt
cagagtatcgagctcccctgcacagcgggaggttaccccagccccaccgtgcgctggctg
aaagatggtcgcccgctgccctcagatgcccgctggacacggcgtttgacagggctgacc
atcagcgacctgaggcaggaggacagcggcagctacgcctgcgaggtcaccaacagtttt
ggctcaaaggaggtgtcgggacagcttcatgttatagatccactacgagtgaccttgtct
cccaagaacctgaaaactggcatcagcagcacactgttcttcacctgcactgtggagggc
tccccagaatacaccatcagctggttcagcaacacggagcccattgtccccgaccagcac
atctccatccagggacaacacaacgacaccctgcagatcaccgcagcacagaagttccac
tctggggcctaccagtgcttcgcctcccgaaagggccacactgctcaggacttttccatt
attctgctagaggatggtactcctcgtattgtgtcttccttcagcgagcgggtggtgaac
cccggcgagcctttctccctcatgtgcgcagccaaaggagccccgccaccctccatcacc
tggacgctggacgatgagcctgtggtgcgagactccacctacaagaccagccagtacacc
ctgtcggacggcctgactgtgtcgcacgtcaacgtcagcagcccgctcattcgagatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccaccccgaatcagacccatgcgggacatcacagcagtggcgggaagg
aacacctacataacgtgccgcgtgattggctacccgtattactccatcaagtggctgaag
gacggcatgcagctgcctgataatcatcgtcaagtggtgtttgagaacggcaccctgagg
ctgacggacgtgcagaagggcgcggacgagggcacctacttgtgtagcgttctgatccaa
ccccaggtgtcaatcaaccagacggtccatgttactgtcaaagtgccacccctcatccag
cccttcgatatcccctctacctcagtggggaagctcatgtacatcgcctgcgtggtgtca
tctggggacatgcccatacgcatcacctggcacaaagacggccagctcatcgtgccaggc
tccgcctctggcgttgcaatagagaccaaagagttcatgagctccctgcaaatctccaag
gtgacactgaagcacaacggaaactacacctgcatcgccagcaacgccgccgccaccgtc
agctgggagagacagttgattgttactgtgccaccgcgtttcgtggtgcagcccaacaat
caggattgtatctacggcaaagccggagttctcaactgctccgtggagggttacccacct
ccaaaagtcatgtggaaacacgccaaaggtgtaggaaaccctcagcagtaccacccagtc
cctctaactggccgcatccagatcatgtcaaacggctctctgctcatccgacatgtactc
gaggacgaccgagggtactacctctgtcaggcctccaacggagtgggctcagacatcagt
aagagcatgatcctcactgtcaagattcctgcaatgatcaccagccaccccaacaccacc
atggcgaggaagggccaaaccaaggagctgaactgcacagcgcggggcgagcagcccatc
atcatccgctgggagagaggagacaccgtcatcgacgccgagaggaacccccgttactcc
atcacaatcaacaagaagggggatgaagtgatctccacccttaagctgaacccagccgag
cgaggagattctgtcttcttctcctgccatgccatcaactcctatggagagggtcgaggc
ctcatccaactcactgtgcaagaaccacccgatccccctgaactggaagtgagggaggtg
aaggacaggagcatgaaccttcgctggatccagaggtttgatggaaacagcatcatcacc
agctatgacatcgagtacaaaaacaagtcggactcctgggatcacatgtacacaaccagg
aacatctcacccaccaacaaccaggccaacattgtagagctgcacccggcctgcgtttac
agcatccgcatgtactcatacaacaagattggccgcagccttcccagcaaagaactcacc
atcagcactgaggaagcacctcctgacgggccgccaatggaagtaatcctccagccgatg
acatcccagagcatacgggttacatggagggctcccaagaaggagctgcagaacggggtg
atccgaggctaccaaatcggttacagggagaacggcccaggcagcaacggccagtacagc
atagtggagatgaaagctacaggggacagtgaagtgtacaccttggacaacctaaagaag
tttgcccagtacggggtcgtagtccaggccttcaacagagccgggacgggtccatccagt
actgagatcaacgctaccacattggaagacgtgcccagcgagcctccgcagaacgtgcga
gccatctccgtgacgtcggacgaggcggtgatcacgtgggcagagcctccacggctgaca
ctgcacggtgtgctgaaaggctaccgcgttgtgttttggtccctcttccctgacggagaa
tggggagagatgcagaatatcaccaccacacgtgaacaggtggagctgcgagggctggag
aagtttaccaactacagtgttcaggtgctggcctacacacaagccggagacggcgtccgc
agcaacgtcctgtacatccaaacgcgcgaggaccttcctggaccaccggctggcattaaa
gcggttccctcctctccaagtagtgtggttgtgtcctggttgcctcctcacaaaccaaac
ggtgttatccgcaagtacaccatctactgctccagtccaggctctggacagccggcgccc
agcgagtatgaggccaacccggagatgctcttctaccgtatcacgcacctttcccgtggt
aaacagtaccacatctgggctgcagccgtgacaactgcgggccgaggcaacatcagctca
aaggtcacagtggagcctgctgggaaagtcccggctaagatcctgtccttcggtggcacg
gtgaccacaccctggatgaaggaagtacgtctgccttgcagctcagtgggcgaacccgcc
cccacgatcaaatggaccaaagacagtgaggactctgccatcccagtgacagccgacagc
caacggcagatcttatccaatggcacactggtgctacgttcagtcaaagcagaggattct
gggtactacacctgtacggccactaacacgctgggcttcgacaccatcatagtcaatctg
gtggtgcaagtccctccagatcagcctcgtctgaccgtctccaccacctccacttcgtcc
atcaccctggcttggatccctggggacaatgggggaagctccatcagaggatttgtgctg
cagtattctgtggacaacacagaggaatggagggacgtgttcatcagctccagcgaacga
tccttcaggttggacaatctgcgctgcgggacctggtacaaggtcaagctggccgccaag
aacagcgtgggctcagggcgcatcagtgagatcattgaggccaagacacatggaagagag
ccagtgttcaataaggatcagccgctgctcacccacatcaactccacacatgcgggtctt
aacctgcagggctggaccagcggcggctgcccaatcactgatctaatgctggacttcagg
cccaagggtacctgggcgtggcagagccttaaagccaactccaccactcagctcttcctg
agcgagctgcgtgaggccacctggtatgagcttaaaatgaaggcctgcaacagcgctggg
tgcggcaaccagagctcccagtttgccaccactgattacgatggcagtacaatccctcca
attaaatcagctcgtggagaaggggatgatgtgaaaaagctgttctctatcggctccccc
gtcatcctggttactctgggcgttgctttgctcttcattatccgcaagaaacgcaaagag
aagaggcttaaacgacttagagatgctaagagcctggcagagatgcttatcagcaaaaac
aatcgcagtatagacactccagttaagggccctcctcaaggaccgaggctccacatcgac
atcccacgtgttcagctactcattgaggacaaggaaggcatcaaacagataggtgaggac
aaagcagcggtgccagtgacagacacagagttcagccaatcagtgaatccgcagaacttc
tgcaccggcgtgtcgctgcaccaccaagccctcatccagaattcagggcctttgattgac
atgtcagacatccggccgggcacgaatcccgtgtccaggaagagtataaaatcagcccac
agctccaggaacagatattccagccagtggacgctgagccggccgagtcagagccagtcg
acagcctcggcgcgaacactgacctcagactggcggacgatgggctctcatggcatcact
gccactgagagtgacagctacagcgccagcctctcgcaagacacagataagggtcgcaac
agcatggtgtccacggagagcgcctcctccacctacgaggagctggcgagggcctacgag
cacgccaagctggaggagcacctgcagcatgccaagttcaccattacagagtgtttcatc
tccgacagctcatctgaccaaatgaccacaggtaccaatgacccggcggacagcatgacc
tccctcagcacgccgtctgaaccaggcatctgccgcttcactgcctcaccgcccaaaccg
caggactacgaccgcggtaaaaatgtggctgtgcccattccccaccgcgctaacaaaagt
gaattctgcaatctacccctctacatgaagacagacccattcttccgcaagcaaggggag
ctgcatgacccgtgcccagctgtgccaccgcgggaagcctcaatccgcagcctgacgcag
cgggcgtatcacacccagggccgtcacaagactctagaccctgccaagcagcaggccctg
acgctgggccattctgggctgggcagcttgggtgcgagctcgggcaccgccaccttgccc
caaaggactctcaccatgcccagctccaacactgcagcgacggcttccacttccagcacg
agcagcaaccccaccaacagtaacaaggtggggggctccagagactcgctgctagagagc
agctcctctgcactggggagactgcagaaacagagtgtgggggcctactccaaatcatac
acgctggtgtag
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