Larimichthys crocea (large yellow croaker): 104919756
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Entry
104919756 CDS
T04659
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104919756
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104919756
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
104919756
NCBI-ProteinID:
XP_010730139
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Position
XXII:17765223..17771467
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AA seq
1030 aa
AA seq
DB search
MENLTPEQWREIMNKKMQFPPELISAIQEGKIELLRGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEGAMDALLQGVKFDFRQIHEALLVAVDTNQPLVVKHLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYEIVTMLTQKGHEISWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLRAFSLSRELRKLSQKEPEFKPQYL
ALEQLCQDFAVELLGMCRNQSEVTTILNSCGDESQDALDEQAFEEGIPNLSRLRLAVNYN
QKLFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSVGIFLTMPILCLVYWIAPKSKVG
KILKIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASREQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLIMLKGHFLCHEQNGAEECTYF
TQTVRQDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIISPKAVFYILRGIFRRLCCCCTCNSEKNYPPIASMVSGGSGSDDQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELSKAVSRMHSDMKMFPQLLMTDDGHGGNDALHK
DGSSILGKYIIGAKNNFRGFHSSKEDKNVPLQVTVHHGEEGVNKEKVADAESDTQQNQVA
GGETEDLKQVTDCDVVKMEEGRAKAELGDKTETERKEKEEEAKTENTDNEVKEEVVAGTS
FNNVEEKVKSTQDESDKKKEGEALTGAKVGEKHTETTPDQAKNISSEKTDTESVLNKFKD
IELQERKQPKWMKGKQFEQNAAEKSGVRESNEKPGGKKIIPSPTGSASSQDTGFGSQEGE
GSIDGILVRP
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagatcatgaacaagaagatgcagttccct
ccggagctcatcagtgccattcaggaagggaaaatagagctgctgcgaggactgctgaag
accggtgatggcatcatccgtcagctggatgagtccgaggaccgccaatggagggaggct
ctcaacttgtccatccgcctgggcaacgagggcgccatggacgccctcctgcagggggtc
aagtttgacttccggcagattcacgaggccctgcttgtcgccgtggacactaaccagccc
ttggtggtgaagcatctgctggaccgcctggaccaggaaaaaggcaacaagatggacgtg
cgctccttctctcaggccatctttgaccgctccattgacaactcccagtttgcccctggt
gtgactcctctgaccttggcctgccagaaagacctgtatgaaatagtcaccatgctcacc
caaaaaggtcacgagatctcatggcctcacaagatatcctgtgcttgtctggagtgtcgc
aatggccgccagtacgatctccttaagttctccttgtctcgcattaacacctaccgtggc
atcgccagccgggcctacctgtctgtcacctctgaagacgccatgctccgagctttctct
ctcagcagagagctccgcaagctctcacaaaaagagccagagttcaagcctcagtacctg
gcactggagcagctttgtcaagattttgccgttgagttgctgggcatgtgtcgcaatcaa
agtgaggtgaccactatactgaacagctgcggagacgagagccaggatgccttggacgag
caggcctttgaggagggaatacccaacctgtcacgtctgcggcttgctgtcaactacaac
cagaagctgttcgtggcccacccaatctgccaacaggtgctgtcatctatctggtgtggg
aacctggcaggctggagaggcagccggactgcctggaagctgtttgtctctgtggggatc
tttctcaccatgcctatcctctgccttgtctactggatcgcacccaaatcaaaggtagga
aagatactgaagatcccagtgatcaaatttctcctccactcagcctcctatctgtggttt
ctcatcacgttactcggagaatcaataacgatggagatgtatcgagacaaatttgcttcc
agggagcagaacatcctgcacagctccttccatatggtgtgggtggtcgggttcttctgg
tacgagtgtaaggaggtgtggatcgaggggctgcggagttacttcctggactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcgtcttttgctttacgtgtgcttatc
atgctcaaaggtcacttcctctgtcatgaacaaaacggtgcagaggagtgtacctacttc
actcagactgtgcgtcaggactggcatcaggaggacccccagctgattgcagaggtgctg
tttgcggtgaccagtatgttgagcttcacgcggctggcgtacatcctgccagcccacgag
tctctgggaactttgcagatctccatagggaagatgattgatgacatgatgagatttatg
tttatattgatgatcattggaacagccttcctctgtggcatcaacaacgtctacgttcct
tatgtcatctctccacatcttggcaggtttaatgagacgttccacttcttattctggacc
atgtttggcgtggccaaccaggactatgttgacatgccgcagtttgtgttggcagagttt
gtaggacggattctgtacggcatcttcactctcgtcattgtcatcgtcctgctcaacatg
cttattgctatgatcaccaactcctttcagaaaatcgaggatgatgcagatgttgagtgg
aagtttgcccggtcaaagctgtacctcagttacttcagagaaggcctcaccatgcctgtg
ccgttcaacatcatcatctcacccaaagctgtcttttatatcttgaggggtatctttaga
cgactctgctgctgctgcacttgtaactctgagaagaactacccgcctatagcctctatg
gtaagtggtggtagcggatctgatgaccagttaccttaccggcagcaggtgatcagagct
ctggtgcaacgctacattgagtcagcacgcagggagtttgaggaaaccaagaggaaagat
atcggtaatcggatcacagagctgagcaaagcagtctccaggatgcacagtgatatgaaa
atgttcccgcagcttctgatgacggatgatggacatggtggaaatgatgcattgcacaaa
gacggatcctctatactggggaaatacatcattggtgccaagaacaatttcagaggtttt
cacagcagtaaggaagacaaaaatgtaccactgcaagtaacagtgcaccatggagaggaa
ggggtgaataaagaaaaggttgcagatgcagagtcagacacacagcagaatcaggtggct
ggaggtgaaacagaggatttaaagcaggtaacagactgtgatgtggtgaaaatggaggaa
ggcagagctaaagcagagctaggagataagacggaaactgagaggaaagagaaggaggag
gaggccaagactgaaaatactgacaatgaagtgaaagaggaggtggtagcaggaacaagt
tttaataacgtagaagaaaaggtcaaatcaacacaggatgagtcagataaaaaaaaggaa
ggagaggcgctcacgggggcgaaggttggtgaaaaacacacagagacgaccccagaccaa
gctaaaaacatcagcagtgaaaagacagacacagagagtgtgttaaacaaattcaaagac
atcgagctgcaagaaagaaaacagcctaaatggatgaagggcaaacaatttgagcaaaat
gcagcagagaagtctggtgtcagggagagcaacgagaaacctggaggcaagaaaatcatt
ccctcgccaacaggcagcgcaagctcccaggacacgggctttggatcccaagaaggggag
ggatcaattgatgggatcctagtgagaccctaa
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