Larimichthys crocea (large yellow croaker): 104919765
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Entry
104919765 CDS
T04659
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104919765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lco03036
]
104919765
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
104919765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
104919765
NCBI-ProteinID:
XP_010730147
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Position
VIII:complement(1133458..1157660)
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AA seq
684 aa
AA seq
DB search
MGRTPHRDQKEEKERRSSITAGSPLDKSNEPFSWEDYLRETSSIAASPTCFKQSRVPPTN
DFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSLDIQPIGTC
ERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKEPASPAKNYFQPGMKLEAV
DRKNPYLICPATVGEVRGQEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCALTKHSLQPPG
NFFTLPGALLAPVSSTSASLTTRRSSSNSSSSMQTSYRLPNPLPPLPVRKGVRGRRPKSQ
TIALLKAAAEAAAAAAVNGASQSPARTGSETQLAPRPHKKRGPKPKNKKKPRVVQSLGAP
SVTAPPPETRLSSSHVSADNNHSNGSNVVCTVCVYVNKHGDYGPHLDRKLVQQLPDHFGP
APVNAVLQQAVQACVDCTYQPSVLLSFLQSQSHTGGEVIRVRSEHGIRYVKLPSASSTSS
VLRFLENMCQHLESDSLFSSQPFSPFNNNTRFYNRTKSEPLSHTENGVPNDDSSKEPATS
NRSLHTTLDYRTTAKKERQYYPGQTHTASPLRRVSSNPAEVGPVCAHRRVEAASSTTGPD
HVKQDKEGSGNDASSWSVDDVIRFVQEADPQTLGPHIELFRKHEIDGKALMLLRSDIIMK
YMGLKLGPALKLCHHIEKLKQTKQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaccccgcacagagatcaaaaagaggagaaggagagacgaagcagcatcacg
gcaggctctcccctcgacaagtcgaatgaaccgttcagttgggaagactatctgagagaa
acgtcctctattgcagcatcgcccacttgcttcaaacagtccagagtcccccccaccaat
gactttaaagctggtatgaaacttgaggcacgggaccctcgcaactctaactctgtgtgc
attgcaacggtgatgggcatgatgggtactcgtctacgcctgcgtctggatggtagcgac
aacaccaacgacttctggagactggtcgactcgttagacatccaaccaataggaacctgc
gagaggaacggagacatgctgcagccaccactgggtttcaggatgaacgcctcctcgtgg
cccatgttcctcctgcggacgctgagcggggcggagatggctcctgcctctgcttttaaa
aaggaaccagccagccccgctaaaaactactttcagcctggtatgaaactggaggcagtg
gacaggaagaacccttacctgatttgtcccgccacagtgggagaggtcagaggacaggaa
atattcgtcatgtttgacggctggcgaggcgccttcgactattggtgccccttcgactcc
agagacatcttccctgtcggctggtgtgccctgacaaaacacagcttacagccacctgga
aacttctttacccttcccggtgctctcctcgctcctgtttcttccacctcagcctccctc
actacacgtcgctcttcttccaactcctcctcctccatgcagacctcataccgactgccc
aaccccttgccacccctccccgtgcgtaagggtgtccgaggtcgtcgtccaaaatcccag
actattgctttgctgaaggcagcggctgaggctgcagcagcagcagcggtaaatggagca
tcacagagccccgctagaacaggctctgagactcaactggcccccagaccacacaagaag
agagggcccaagcctaagaacaagaagaagcctcgggtggtgcaatcccttggggcacct
tcggttacagctccgcctccagagaccagactgagttccagccatgtctcagcggacaac
aaccatagcaacggttcaaatgtggtttgcacagtgtgcgtctatgtaaacaagcacggt
gactatggcccacatcttgaccgaaaactggtgcagcagctcccggaccacttcggtcca
gctccagtcaacgcagtgcttcagcaggcggttcaggcctgtgtggactgcacgtaccag
ccctctgtgctgctgtcgttcctacagagccagtcccacacaggaggagaggtcatcaga
gtgcggtcagagcatggtatccgctacgtgaagctgccctccgcctccagtacgtcttct
gtgctgcggtttctggagaacatgtgccaacatctggagagtgacagtctgttcagctcg
cagccattcagccccttcaacaacaacacacgcttctacaacaggaccaagtcagaacca
ctgtctcacactgagaacggcgtgcccaatgacgattcgtcaaaggaacccgctaccagc
aaccgttcccttcacaccacattagactacaggacgacagcaaagaaggagcggcaatat
taccccggacagacgcacacggcttcaccactacggcgcgtcagctccaacccagctgaa
gttggcccagtgtgtgcgcacagacgagtggaggcagctagctcaacaacaggcccagat
catgtgaaacaagacaaagagggttcagggaatgacgcttcttcctggtcggtcgatgat
gtcatacggtttgtccaagaggcggatccccaaactcttggcccgcacatcgagctgttc
aggaaacacgagattgatggcaaagctctgatgctgctgcgcagtgatatcattatgaag
tacatgggactgaaactgggccctgcgcttaaactgtgtcaccacatcgagaagctgaag
cagaccaaacaataa
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