Larimichthys crocea (large yellow croaker): 104919782
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Entry
104919782 CDS
T04659
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04137
Mitophagy - animal
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104919782 (usp8)
04137 Mitophagy - animal
104919782 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lco01002
]
104919782 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104919782 (usp8)
04121 Ubiquitin system [BR:
lco04121
]
104919782 (usp8)
Enzymes [BR:
lco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104919782 (usp8)
Peptidases and inhibitors [BR:
lco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104919782 (usp8)
Membrane trafficking [BR:
lco04131
]
Endosome - Lysosome transport
Others
Others
104919782 (usp8)
Ubiquitin system [BR:
lco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104919782 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
CAF-1_p150
Motif
Other DBs
NCBI-GeneID:
104919782
NCBI-ProteinID:
XP_010730168
LinkDB
All DBs
Position
VIII:1446530..1456971
Genome browser
AA seq
1084 aa
AA seq
DB search
MPAVSTGVKELYLSTSLGDLNKKAEIKPDKTSTRSYVQSACKIFKAAEECRLDRDEEKSY
VLYMKYLTVYDIIKKRPDFNQQLEYYMTMLGPTSIKKALEEAEKLSESLKLRYEEVEVRK
KLEEKERQEEKKRKEEITEKDAGRGSPKTSSANKKDSKKVKEQNELKNTTPKAVVPAGGI
TAEKLFHMMKDQTIAMIIMDARSHKDFEESHMQVPAQTCICVPEEAISPGITVNQIEAKL
PDMSKDHWRRRGFVDYIVLLDWFSSVTDLKLGTILQSLKDALFKWDSITILRSEPLVLEG
GYENWLLFYPMYTTNAKVRPPRQNVISTLPQLNFSYPSLEEPKPLPPPQPEPVIPEPQEP
SAPVLMNGVAPAEPPTSKTSMITDRLPDTTDSPVTGTTNSGLDLNKKGSGTGTSSQSPGT
AKAFPQFDRTKKPSVWVSDEPKPSQNGSAKDSTQNGPVIPDRSNKPPFATHTSLSKEEQS
QIHSEAVAVMEKARQEQEKRIQERRSEEEKRKKELKERLEREESDKRRKEEEEKGHQEKK
KLERQKAEEEEDKENRVWEEKERRGKEQSSDTPPKSMSLDSPVPNHIVNEIKREPLTRAR
SEEMGRSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKQ
PQPAEPDANRDQEREQSKLKRSYSSPDISQDLREEAQKKASAPTTAAVIPTINRETKPPT
AKVYSKVEITRPSAAKLRNLNPTFGGLGASLTGLRNMGNTCYMNSILQCLCNTRSMADYF
NNNMYMEDINRYNVLGHKGEVAEEFGVIMKALWAGQYKCISPRDFKITIGKINDQFAGYD
QQDSQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVAL
FQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEERLTDNNKVFC
RHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTYVDFSLDALDLTQYVIGPK
QSLKRYNLYGVSNHYGGLDGGHYTAYCKNNSKQRWYKFDDHEVSEISTSSVKSSAAYILF
YSTL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtatccaccggggtcaaagagctgtacctgtccacatctctgggagacctc
aacaaaaaggctgaaatcaaaccagacaagacgagcaccaggagctatgttcagagtgcc
tgcaaaatcttcaaggcggcagaggagtgtcgccttgaccgagatgaggagaagtcttat
gtactgtacatgaagtatttaacagtatacgacatcatcaagaaaagaccagacttcaac
cagcaactggagtattacatgaccatgcttggcccaaccagcattaagaaagccttagaa
gaagcagagaagctctctgaaagccttaaactcaggtatgaggaagttgaggttcggaaa
aaactcgaggagaaggagagacaagaagagaagaaaaggaaagaggaaataacagagaaa
gatgctggtcgaggctctccgaaaacctcctcggcaaacaagaaggacagcaaaaaggta
aaagaacagaatgaactgaagaatacaactccgaaagctgtggtgccggctggtgggatc
acagccgagaaacttttccacatgatgaaggaccagacgattgcgatgattatcatggat
gcccgcagccacaaggactttgaggagtctcacatgcaggtcccagcccagacctgcatc
tgcgtgcctgaggaggccatcagcccaggaatcactgtgaatcagattgaggcaaagctc
ccggacatgtccaaagaccattggaggcggcggggatttgtggattacatagtcctgctg
gactggttcagttctgtcactgacctcaaactgggcaccatcttgcagagcctcaaagat
gccctctttaagtgggacagcatcaccatcctgcgtagtgagccactggtgctggaggga
ggctacgagaactggctgttgttttaccccatgtacacaaccaacgctaaagtccgcccc
cctagacagaatgttatcagcaccctgcctcagttgaactttagctacccatccctagag
gaaccaaagcctctgcccccacctcaaccagagcctgttatacctgagcctcaggaacct
tctgctcctgtgctgatgaatggggttgcaccagcagaaccccccacgtctaaaacctcc
atgattactgacaggttaccggacactaccgattctcctgtcacaggcaccacaaattct
gggttagacctcaataaaaagggctcagggacaggcacatccagccagtcacctggaaca
gccaaggccttcccacagtttgaccgtaccaagaaaccctctgtctgggtgtctgacgag
cccaagcccagccagaatgggtcagcaaaggactccacccagaatggcccagttatcccc
gaccgctcaaacaaaccaccgttcgccacccacacttctttgtctaaagaggaacaaagt
cagatccactctgaggcagtggcagtgatggagaaggcgagacaagagcaggagaaacgc
atacaggagcgtcgttcagaggaggagaagcggaagaaggagctcaaagaaagactagaa
agggaggaaagtgataagaggaggaaggaggaggaggagaaaggacaccaggagaaaaag
aaactcgaaaggcagaaggccgaagaagaggaggacaaagagaacagagtatgggaggag
aaagagaggagggggaaggagcagagctctgacacgcctccaaagagtatgtctctggac
tcgcctgttcccaaccatatagttaatgaaattaagagggagcccctgaccagggcgagg
agtgaggagatgggcaggagtgtaccaggccttccagacggttggatgaagttccttgac
acagtgacggggacctacagatactaccattccccaaccaaccgtgtccacctgtaccct
cctgaggtcactgttccccagaccccaccctccacaccgccaacagtcaaacagaaacaa
ccacagccagctgagccggacgccaaccgcgatcaagagcgggagcagtccaaactgaaa
cgctcctactcctcccctgatatcagccaggacctgagagaggaggcccagaagaaggcc
tctgccccgactacagctgccgtcatacccaccatcaacagggagaccaaacctcccacc
gctaaagtctattctaaagtggagattacgcgaccgtctgctgccaaacttcgcaatctg
aatcctacgttcggaggtctgggtgcctcactcactggccttcgtaacatgggtaacaca
tgttacatgaactccatcctgcagtgtctgtgtaacacccggtccatggctgactacttt
aacaataatatgtacatggaggacatcaacaggtacaacgtccttggccataaaggggag
gtggcggaggagtttggtgtgatcatgaaagctctgtgggccggtcagtacaagtgcatc
agcccgcgggactttaagatcaccataggcaagatcaacgaccagttcgctggctatgac
caacaggactcccaggagctgctgctgttcctcatggacgggcttcatgaggacctcaac
aaggcggacaacaggaagcggtacaaggaagaggagaacgaccatctggatgatcagaca
gcagctgacctcgcgtggagcaaacacaagctgctgaacgagtccatcatcgtagcgctg
ttccagggccagttcaagtccacggtgcagtgtctgacgtgccatcgcaagtcacggacg
tttgagacctttatgtacctgtcgctgcctctggcctccaccagcaagtgctccctgcag
gattgtctcaggctgttctcaaaggaagagaggctgactgacaacaacaaggttttctgc
agacactgcaaggctcacagagattccaccaagaaactagagatctggaaggttccacct
attctcctggtgcacttaaaacgattctcctatgagggtagatggaagcagaagctgcag
acgtatgtcgacttctctttagatgctctggatctgacgcagtatgtcattggacccaaa
cagagcctgaagagatacaacctttatggagtttctaaccactacgggggtttggatggc
ggccactacacagcatactgtaagaacaacagcaaacagcgctggtacaagtttgatgac
cacgaggtgtccgaaatctccacctcctctgtcaagtcctcagcggcctacatcctgttt
tactccaccctgtga
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integrated database retrieval system
