Larimichthys crocea (large yellow croaker): 104919838
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Entry
104919838 CDS
T04659
Name
(RefSeq) roundabout homolog 1 isoform X3
KO
K06753
roundabout, axon guidance receptor 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lco04515
]
104919838
Cell adhesion molecules [BR:
lco04515
]
Immunoglobulin superfamily
ROBO family
104919838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
Motif
Other DBs
NCBI-GeneID:
104919838
NCBI-ProteinID:
XP_010730241
LinkDB
All DBs
Position
VII:complement(23848161..24154946)
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AA seq
1692 aa
AA seq
DB search
MRGTWSGATPLLIMVLLRLARGQEVPLVPETGVAQDGASEGATTAPTTEHEDDNSLGYTG
SRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQ
RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPAD
VIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERITIRGGKLMITNARKTDAGKY
VCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKD
DGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVAENMVGKAEASATLTVHVVSVPPAFVV
RPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQTGDLTI
TDAERLDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQTVAVDGTVVLN
CVASGNPAPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEAS
WKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSVTLSWKPNLNAGATPTSYI
IEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITDAVKTQ
DIPPTSQGVDHRQIQRELGEVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGFKVMYRPSP
EGQQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDVKIGKTLEEAP
SAPPREVTVTESGDNGTAIMVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGSTL
SVLIPSLAPGIRYSVEVAASTGAGPGVKSEITFFQLDAAGRITESVSIENPLSQQISDVV
KQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGE
GVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDSNLATYSRPAD
CIANYNNQMENKQTNLIVPESGVYGDVDLSNKINEMKTFNSPNLKEGRFVGPGGQPTPYA
TTQLIQSSIMGNNMNSDRGTGGSGGGLGVGGEVNEKHCWKPTSVQQQKQEMGSQLQYNIM
EQNKLNKDRYRGGDSPMPATIPYNQTHDTHTGGSYNSSDRGSSSTSGSQGQKKGVRTPKL
PKQSTMNWADLLPPPPANPPPSRSTEEYSLSMEESCDPDMQCPMPASHMYLQPDELEEEE
EMERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDTHDSHERRRHAVSPPP
PPRPLSPSHTYGYITSPLALDTDGMEEEEDILEEEEEGDETDAEVAKMHYHHTHPHTHPH
HPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGS
FFTDADFAQAVAAAAEYSGLRVAKYPNTQGHDVGGASARKYQINPSGHRPGSPVSTDSNM
SMAAVHRRPPKKQKQHPAGGHPGNQRREAYNEDLPPPPIPPPAVLKSPTHPSKAALEGRG
VISPKAGEGRDKRGGTGSYRPREGSDPRTGSSERKDAQERQKTAHGGKGNKHEGSSANKA
RQHAGSEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRREGGRRNPADMGLNTTGAF
QPGDEELEMVES
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcacatggtcaggggccacacccctcctcataatggttcttctcagactggcc
cgaggccaagaggtccctttagtcccagagaccggagtcgctcaggatggggccagcgaa
ggggcaacaacagctcccaccaccgaacacgaggatgacaactctttgggctacacagga
tcccgtctgcgccaagaggacaccccaccccggattgtggagcacccatctgacctgatt
gtctccaaaggggagcccgccactctcaactgtaaagcggaggggcggccgaccccgaca
gtggagtggtacaaggatggagagcgggtggaaacggacagggacaatccccgttcgcag
cgcatgctgctgcccagcggctccctcttctttctacgcatcgtccacggacgacggagc
aaaccggacgaaggttcctacgtctgcgttgcccgcaactacctgggagaggcagtgagt
cacaatgcctcgctggaagtagccattttacgcgatgacttcagacaaaaccctgcagat
gtgatcgtggcagcaggagagccagccgtcctggagtgtcaacctccacgtggacatcct
gaacccactatatcatggaaaaaagatggaataaacattgacgaccgagatgagaggatc
actatacgcggaggaaagctgatgatcacaaatgcccggaagactgatgctgggaagtac
gtgtgcgtcggcacaaacatggttggagaacgtgaaagtgaaatagctgaacttacagtg
cttgagcgtcccagctttgtgcgtcgcccaggcagccaggtggtgttagtggaccaaagc
gtggagttcaggtgtgaggcccgtggcgacccagttcccaccgtgcgctggaggaaagat
gatggtgatctgcccaaaggaagatatgaaattcgcgaggaccacaccctgaagatccgt
cgtctgacatcagccgatgtaggctcctacacctgcgtcgcagagaacatggtgggcaag
gcggaggcatcggccacgctcaccgtccacgtcgtgtctgtgcccccagcattcgtggtg
agaccaaggaaccaggtggttggggttggcagaactgtcaccttccagtgcgaggctact
ggaaacccacagccagccattttctggcagcgggaaggcagtcagaatctgctcttctcc
taccaacctcctcaaccctccagccgattttccgtgtctcaaactggggatctgaccatc
accgatgctgaacgcttggatatgggatactacagctgccaggccctcaacattgctggc
agtgtcatcaccaaggctctgttagaggtcactgatgttgtgtcagaccgcccgccacca
gttatccgacagggcccgaccaatcagacggtagcggtggatggcacggtggtcctcaac
tgcgtggcatcaggaaaccccgcccccaccatcctgtggaggaaggatggtgtgctagtg
tccacacatgattccagggtcaaacagctggacacgggcgcattgcagatacgctatgca
aagcttggtgacactggcacctacacctgtattgcgtccacacccagcggagaggcctca
tggaaagcctatttagaagtccatgagtttggagttccagtccagccaaacagacccact
gacccaaacctgatccccagtgccccttccaaacctgaggtcactgacgttacccgcacc
tccgtcaccctctcctggaaacctaatcttaatgctggagccacaccaacctcctatata
atagaggccttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaa
actgagtcatttgtactgaagggcttgaagcccagcgcagtctacctcttcttagtacgg
gcagccaatgcctacgggctgagtgatcccagtcctatcactgatgctgtgaaaacacaa
gatatcccccccaccagtcagggtgtggaccatcgtcagatccagagggagttgggagaa
gtggtcatccacctgcacaaccccaccattctctcctcctcgtctgtcagggtgcagtgg
acagtggagcagcagtcacagtacatccagggcttcaaagtgatgtacaggccttcaccg
gaggggcagcagaggagcgaatgggctgtgttcgaagtgcgcacccctggagaggacagt
gctgttgtgccacagctccgaaaaggagtcacatatgaattcaaagtccgccccttcttc
aatgaattccagggaaccgacagtgatgtcaaaattggcaagacgctggaagaagccccc
agtgcccctcctcgtgaggttacagtgacggagagcggggacaatgggaccgccatcatg
gtctcctggcaaccccctccagaagaggagcagaatggggtggtccaggagtacaagatt
tggtgcttggggaatgagagtaggtaccacatcaaccgcacagttgacggctcaacctta
tccgtgctgattcccagtctggccccggggattcgctacagcgtggaagtagcagcaagc
accggggcgggtcctggagtcaagagcgagatcaccttcttccagcttgatgcagctggg
cgaattaccgagtctgtgagcattgagaaccccctctcccagcaaatctcagatgtggtc
aagcagccagccttcatagcgggcatcggagctgcttgctggatcatcctcatggtcttc
agtatctggttgtacagacaccgaaagaagaggaacggcctctccagcagctacgcaggc
atacgcaaagtgccatcctttactttcacaccaacagtggcgtatcagagaggtggagaa
ggtgtaagcagcgctggaaggcctggtttgctaaacatcggggaatctgccactcagccc
tggctggctgacacatggcccaactcctgctccaaccacaacgactgcagcatcaactgc
tgcactgctggcaacggcaacagcgacagcaacttggcaacatacagccgcccagccgac
tgcatcgccaattataacaaccagatggaaaacaagcagaccaacctcattgtgccagag
tcaggagtctatggagatgtagacttgtccaacaagatcaatgagatgaagaccttcaac
agcccaaacctgaaagaaggccgctttgtgggtccaggcggccagccgacgccgtacgcc
accacccagctcatccagtcctccatcatgggaaacaacatgaactcagatagaggaacc
ggagggagtggaggaggactcggggttggaggggaggtgaatgaaaaacactgctggaag
cccacctcagtccaacagcagaaacaggaaatgggctcccagctgcagtacaacatcatg
gaacaaaacaagctgaacaaggaccgctacagaggaggcgacagccccatgccagccacc
atcccctacaaccagacccatgacacccacactggaggctcctacaacagctccgaccga
ggcagcagtagtacctccgggagtcagggtcagaagaaaggagtgcgcacccccaaacta
cccaaacagagcacaatgaattgggctgaccttctgccccctccccctgcaaacccaccc
ccaagtcggagcacagaggagtactctctatcgatggaagaaagctgtgacccagacatg
cagtgccccatgcctgcctctcacatgtacctgcagcctgatgagctggaggaggaagag
gagatggagagggggcccactcctcccgtgcgaggggcagcctcttcccctgcagctgta
tcttacagtcaccagtccacagccactctcaccccctcgccccaggaggagatgcagccg
atgctgcaggacacacatgacagccatgaacgcaggcgccatgctgtgagccctccgccc
cctccaaggcccctctccccttcacacacatatgggtacatcaccagcccattggccttg
gacactgatggtatggaggaggaggaggacatattggaggaagaggaggagggtgacgag
acagatgcagaggtggccaagatgcactaccaccacacccacccccacacacacccccac
cacccccagatgcatccgcgacggttgctgctacgagggcttgaacagacgcctgcgtcc
agcatgggcgacctggagagctcggtgaccggctccatgatcaacggatgggggtcggcc
tctgaagaggataatgtctcttcagggaggtccagtgccgtcagctcgtcagatgggtcc
ttcttcactgatgctgactttgctcaagcggttgctgcagctgcagagtattcaggcctc
agggtggccaaatatccaaacacacaaggccacgatgtcggaggagcttcagcacgaaaa
taccaaataaacccgtcaggccaccgtcctggcagcccggtgtctacagacagtaacatg
agtatggcagctgtacacaggaggcctcctaagaagcagaaacagcatcctgcaggaggt
catccaggaaaccaacgacgtgaagcctacaatgaagatctcccacctccgcccatccca
cctccagcagtgcttaagtcgcctacacacccctccaaggcagccctggagggccgggga
gtgatttctcccaaagcaggtgagggtcgagacaagagaggagggacggggagctatcgg
ccccgagagggctcggaccccagaaccggctcgtctgaacgcaaagacgctcaggagaga
caaaagactgctcacggagggaaagggaataaacacgagggtagcagcgccaacaaggca
cgccaacacgcaggttcagaggacattctgccctatagccgaccacagttccccacagtt
aacagccccagagacccaagctcctccagctccatgtcctccaggggctcagggggccgg
cggagagaaggaggccgcaggaaccctgcagacatgggcctcaacaccacgggggccttc
caaccaggagatgaagagctagagatggtagaaagctga
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integrated database retrieval system
