Larimichthys crocea (large yellow croaker): 104919896
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Entry
104919896 CDS
T04659
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03266
Virion - Herpesvirus
lco04145
Phagocytosis
lco04510
Focal adhesion
lco04512
ECM-receptor interaction
lco04517
IgSF CAM signaling
lco04518
Integrin signaling
lco04810
Regulation of actin cytoskeleton
lco04820
Cytoskeleton in muscle cells
lco05100
Bacterial invasion of epithelial cells
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
104919896
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104919896
04517 IgSF CAM signaling
104919896
04518 Integrin signaling
104919896
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
104919896
09144 Cellular community - eukaryotes
04510 Focal adhesion
104919896
09142 Cell motility
04820 Cytoskeleton in muscle cells
104919896
04810 Regulation of actin cytoskeleton
104919896
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104919896
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104919896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lco04147
]
104919896
04515 Cell adhesion molecules [BR:
lco04515
]
104919896
04090 CD molecules [BR:
lco04090
]
104919896
Exosome [BR:
lco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104919896
Cell adhesion molecules [BR:
lco04515
]
Integrins
Integrin alpha subunits
104919896
CD molecules [BR:
lco04090
]
Proteins
104919896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
104919896
NCBI-ProteinID:
XP_019129449
LinkDB
All DBs
Position
XV:10270554..10301746
Genome browser
AA seq
1060 aa
AA seq
DB search
MGLERFRVKTPGIGALLARSLLCIIGLLFTFSPPVCEAFNLDVENPAVYSGPEGSYFGYA
VDFYLADSSSASVLIGAPKANTRQVNVTEGGAVFYCPWSLSQTDCHTIEFDTEGDRPVTL
NETQYQGDFKSHQWFGATVRSHNDTILACAPLYSWRTEKDARLTDPTGTCYLSIYNFTRF
VEYAPCRTEISTEEGQGYCQGGFSADFTTDGKVVLGGPGSYYWQGQVISASKEDIIKAYY
PGYFIQSVERQIQTKQIRSVHDDSYQGYSVAVGEFSGDQVEDFVAGVPKKQKMLYGSVYI
LNGTDLSTMIEYNGEQMGSYFGSAVATADINSDGMVDLLVGAPMFMVRGSDGRLEEMGRV
YVYLQRSPLDLELRQPHLTGTQVFGRFGSTIAPLGDLNQDGFNDVAISCPYGGEDQQGLV
YIFNGYSDGLREKPSQVITGQWAAGTIPASFGFSLRGAKDLDMNGYPDLIVGAFGVNKAV
LYRSRPIVNASGFLTVHPTMINPEEKNCMVTSGNTSIPVSCVNLSFCISADGKHLPGSLD
FQVEVQLDSHKHKQKGAVKRALFLDSQQPLLQKSVIVRHGERVCDNTKIYLKEEKDFRDK
LSSIYVALNFSLDPKAAADSHGLRPILNYQTTNVIEQKAQILLDCGEDNICVPDLKLAVH
GNRKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSY
ETENQTRYLSCDLGNPMKSGTNLWAGLRFTVPRLKDQHKTVQFELQIRSKNENNSHSEVV
PYKLEVVVQADVILQGVSRPDKVFFPPANWKVTKSYGVEQDVGPAVEHIYELVNNGPSRI
SHTLLELRCPLRVQGHNLLYPLEFSTEGPINCTSDKNMNHLHLKLQRTSTDPPILALKAN
EHHVERRDVHKNQLAHLTNLSCSNTECWMLQCNVGLLEKGTTAIVKVHSRIWAETFIERT
YKQYVLECLARYSVKKMPYAILPKYSPSGQKKVVTPVVWNKPDIENSVPLWIIILAILAG
LLLLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggcttggaacgatttcgcgtaaagacgccggggataggagcgctgctcgcccgctct
ctcctttgtatcatcgggctattattcactttttctccgcctgtctgcgaggcgttcaac
ttggacgtggagaacccagctgtttacagcggacctgaagggagctacttcggatatgct
gttgacttttatttggctgattcttccagtgcgagcgtcctgataggagctccgaaggcc
aacacaaggcaggttaacgttacagaaggaggagccgtcttctactgcccgtggagcctc
agccaaacagattgccacaccatcgagtttgatactgaaggtgatcgccctgtcaccctg
aacgaaacacaatatcagggtgatttcaagtcccaccaatggttcggtgccaccgtgcgt
tctcacaatgacacgattctggcttgcgcccctctctattcctggcgaactgagaaggat
gcccgccttactgaccctacaggaacctgctacctctcaatctataatttcactagattt
gtggagtacgctccttgccgcacagagatcagtactgaggagggacaaggttactgccaa
ggaggattcagcgctgacttcacaacggacggcaaagtggtgttgggagggccaggcagc
tactattggcaaggtcaggtgatctctgcaagtaaggaggacatcatcaaagcctactac
ccaggctattttatacagtctgttgagagacagatccagacgaaacaaattcgttccgta
catgatgacagctaccaaggctactctgttgctgttggggaattcagtggtgatcaggta
gaagattttgtggccggcgttccaaaaaaacaaaagatgctttatggttcggtgtacatt
ctgaacggtacagatctgagcaccatgattgaatacaatggcgaacagatgggatcatat
tttggctctgcagtagcaacggctgatatcaacagtgatgggatggttgacctgctggtg
ggagcacccatgttcatggtccggggctccgatggccgcctggaagagatgggccgagtt
tatgtttacctacagcgtagccctctggacctggagctccgccaacctcatctgacaggc
acccaggtctttgggagatttgggagcaccattgcaccattgggagatctgaaccaagat
ggattcaatgatgtggccatcagctgtccatatggaggagaggatcaacaaggactggtc
tacatctttaatggatactcagatggactcagggaaaagccatctcaggttatcactggc
cagtgggctgctggaactattcctgccagctttggattttccctcagaggtgctaaggat
ttggacatgaatggatacccagatctcatagttggtgcttttggtgtcaataaggcagtt
ctctacagatcccgcccaatagttaacgccagtggctttctgacagttcaccccaccatg
atcaaccctgaagagaagaactgcatggtcaccagtggaaacaccagcattcctgtttcc
tgtgtcaacctgagtttctgcatatctgctgatgggaagcacctaccaggcagcctagat
ttccaggtggaggtgcagctcgacagtcataagcacaagcagaaaggggcagtaaagagg
gctttgttcttggattcccagcagcccttgctccagaagagtgtgatagtgcgtcacggc
gagcgtgtatgcgacaacaccaagatctacctaaaagaagagaaagacttcagggataaa
ctctcctccatttatgtggccttgaacttcagcctggatccaaaagctgcagctgactcc
cacggcctgcggcccattctcaactatcagaccaccaacgtgattgaacagaaggctcag
attctgctggactgtggtgaggacaacatctgtgttcctgatttgaagctggcagtccac
gggaacaggaaggaagtctacttgggtgatgacaactcgctaaccttgactttcaacgcc
aggaatgagggtgagggtggagcgtacgaggcagagctgtatgtggtgctgccccccgaa
gctgactacagcggtattgcccgcaataatgagagcctgacccagctgacctgcagctat
gagacagagaaccagacccgatacctcagctgtgatttgggcaacccgatgaagtctggc
accaatctgtgggcaggtctgcgcttcacagtgccaaggctgaaggaccagcacaaaact
gttcagtttgagctgcagatccgcagtaaaaatgagaataattcccacagtgaggttgta
ccctacaagctggaggtggttgttcaggctgatgtcattctacagggtgtgtctcgacca
gataaggtcttcttcccgccggccaactggaaggtgaccaagagctatggggtggagcag
gatgtcgggcctgcagtggagcacatctatgagctggtgaacaacgggcccagtcggatc
agccacaccctactcgagcttcgctgccccctccgcgtccagggccacaatctcctttac
cccctggagttctccacagaaggccccatcaactgcacctcagacaaaaacatgaaccac
ctgcacctcaaactccagcgcacatccacggatccacctatactggcgctgaaggcaaat
gagcaccatgttgagaggagggacgtccacaagaatcaactggcccatttgactaacctg
tcctgttcgaatacggagtgctggatgctccagtgtaacgtgggcttgctggagaagggg
actactgctatcgtcaaagtgcactcccgcatctgggccgagaccttcattgagagaact
tacaagcaatatgtgctggagtgcctggccagatacagcgtgaagaagatgccttacgcc
atcctacccaaatattctcccagtggacagaaaaaggtggtgacaccagtggtgtggaac
aagccagatattgaaaactcagtccctctgtggatcatcatcttggccattctggctggt
ttactgcttctggctctactcatctacgtcctatacaagtttggtttcttcaagcgatct
ttaccttacggcactgccatggagaaggcacaactcaaaccacaggctgcctctgaggcc
tag
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integrated database retrieval system
